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Normalized Counts Table (ENSG00000132341.12)

binID	chr	start	end	testable	status	baseMean	dispersion	pvalue	padjust	log2FC (mutant/control)	log2FCvst (mutant/control)	Normalized Coverage Counts
												MCF10A-parental-DMSO-1	MCF10A-parental-DMSO-2	MCF10A-parental-DMSO-3	MCF10A-KI-DMSO-7	MCF10A-KI-DMSO-8	MCF10A-KI-DMSO-9
E001	chr12	130872036	130872046	TRUE	OK	160.3	0.00365	0.9603	0.9913	-0.014	-0.007	134.8	166.3	143.0	164.1	177.0	176.5
E002	chr12	130872046	130872065	TRUE	OK	414.1	0.00169	0.8997	0.9758	-0.017	-0.008	371.0	408.8	366.9	418.0	478.7	440.8
E003	chr12	130872065	130872069	TRUE	OK	433.4	0.00161	0.9047	0.9771	-0.016	-0.008	392.4	424.6	382.4	432.9	503.9	464.0
E004	chr12	130872069	130872075	TRUE	OK	654.0	0.0032	0.6472	0.9	-0.056	-0.028	640.6	632.5	563.1	649.3	731.2	707.1
E005	chr12	130872075	130872081	TRUE	OK	1048.9	0.00204	0.5596	0.8694	-0.056	-0.028	986.9	1021.5	937.8	1074.3	1179.5	1093.4
E006	chr12	130872081	130872095	TRUE	OK	2279.5	0.00325	0.4135	0.8157	-0.088	-0.044	2175.1	2150.8	2149.5	2366.9	2456.4	2378.5
E007	chr12	130872095	130872126	TRUE	OK	5888.8	0.00408	0.3645	0.7966	-0.106	-0.053	5725.1	5606.2	5460.7	6032.5	6300.9	6207.6
E008	chr12	130872126	130872583	TRUE	OK	209.3	0.00707	0.03233	0.4639	0.344	0.172	156.1	191.0	156.3	215.4	257.7	279.4
E009	chr12	130872583	130872617	TRUE	OK	7840.7	0.00438	0.4484	0.8288	-0.094	-0.047	7601.7	7386.9	7249.9	8102.0	8433.6	8270.4
E010	chr12	130872617	130872629	TRUE	OK	9487.7	0.00457	0.4468	0.8283	-0.096	-0.048	9085.0	8954.8	8862.8	9945.1	10192.4	9886.3
E011	chr12	130872629	130872835	TRUE	OK	152.1	0.022	0.2356	0.7431	0.283	0.141	152.7	133.6	87.6	178.9	162.4	197.7
E012	chr12	130872835	130872912	TRUE	OK	14495.2	0.00393	0.5036	0.8491	-0.081	-0.040	13563.9	13807.8	13430.0	15074.3	16004.1	15091.2
E013	chr12	130872912	130872920	TRUE	OK	14012.5	0.00395	0.4058	0.8126	-0.098	-0.049	13247.5	13374.2	13014.3	14561.4	15398.6	14478.9
E014	chr12	130872920	130872964	TRUE	OK	51.8	0.00458	0.7045	0.9186	-0.083	-0.041	52.9	51.5	42.1	57.3	55.5	51.4
E015	chr12	130872964	130873002	TRUE	OK	350.2	0.00308	2.021e-22	9.352e-19	1.116	0.558	183.4	204.9	206.2	497.1	519.6	490.2
E016	chr12	130873002	130873102	TRUE	OK	19664.6	0.00425	0.5429	0.8632	-0.078	-0.039	18744.0	18489.5	17919.6	20496.0	22137.3	20201.3
E017	chr12	130873102	130873128	TRUE	OK	16460.6	0.00403	0.6318	0.8948	-0.061	-0.030	15809.8	15513.2	14721.5	17321.7	18665.8	16731.3
E018	chr12	130873128	130873839	TRUE	OK	88.4	0.00443	0.1337	0.6737	-0.258	-0.129	91.3	86.1	89.8	89.9	82.8	90.8
E019	chr12	130873839	130874033	TRUE	OK	34.1	0.0267	0.9086	0.9781	0.005	0.003	43.5	19.8	29.9	41.5	39.8	30.3
E020	chr12	130874033	130874084	TRUE	OK	24.6	0.00736	0.4992	0.8473	-0.194	-0.097	28.1	20.8	23.3	22.7	25.1	27.2
E021	chr12	130874084	130874545	TRUE	OK	347.1	0.00547	1.23e-08	7.738e-06	0.791	0.395	188.5	255.4	245.0	426.0	498.6	469.0
E022	chr12	130874545	130874550	TRUE	OK	13018.4	0.00421	0.8783	0.9701	-0.025	-0.013	12667.5	12051.8	11385.8	13874.5	14967.0	13163.6
E023	chr12	130874550	130874733	TRUE	OK	21912.8	0.00503	0.4808	0.8408	-0.092	-0.046	21582.7	20199.9	19785.3	22908.4	25427.6	21573.1
E024	chr12	130875611	130875639	TRUE	OK	12524.8	0.00441	0.1509	0.689	-0.165	-0.083	12916.5	11491.6	11725.1	12843.7	14316.5	11855.3
E025	chr12	130875639	130875654	TRUE	OK	11863.7	0.00325	0.08504	0.6121	-0.169	-0.084	12084.9	10985.8	11209.6	12015.6	13704.8	11181.5
E026	chr12	130875654	130875665	TRUE	OK	11765.0	0.00284	0.09276	0.625	-0.153	-0.077	11902.4	10862.1	11087.6	11841.6	13785.4	11110.9
E027	chr12	130875665	130875709	TRUE	OK	12771.0	0.00206	0.1744	0.7065	-0.104	-0.052	12584.7	11729.2	11902.4	12803.2	15391.3	12215.4
E028	chr12	130875709	130875782	TRUE	OK	14995.3	0.00159	0.2524	0.7504	-0.073	-0.036	14302.6	13714.7	14087.4	14755.1	18731.8	14380.1
E029	chr12	130875782	130875784	TRUE	OK	133.9	0.00978	0.02878	0.4455	0.421	0.211	84.4	108.9	119.7	140.3	166.6	183.6
E030	chr12	130875881	130875924	TRUE	OK	14220.9	0.00209	0.6166	0.8892	0.048	0.024	12966.9	12781.3	12890.1	14030.7	18796.8	13859.6
E031	chr12	130875924	130875963	TRUE	OK	13899.4	0.00225	0.3235	0.7809	0.090	0.045	12368.1	12463.6	12486.6	13723.3	18686.8	13667.9
E032	chr12	130875963	130876234	TRUE	OK	16648.2	0.00365	0.3141	0.7769	0.118	0.059	14646.4	14990.6	14812.4	16246.4	22876.9	16316.8
E033	chr12	130876234	130876281	TRUE	OK	1749.4	0.00199	0.281	0.7631	-0.087	-0.043	1745.2	1672.8	1547.5	1751.2	2130.7	1649.2
E034	chr12	130876281	130876733	TRUE	OK	1998.4	0.00181	0.1411	0.6803	-0.117	-0.059	1893.6	1897.5	1945.5	1981.5	2212.4	2059.8
E035	chr12	130876733	130877676	TRUE	OK	2518.9	0.0018	0.7182	0.9232	0.036	0.018	2232.2	2319.1	2293.6	2408.4	3386.6	2473.3
E036	chr12	130877676	130877678	FALSE	LOW_COUNTS_INDEP_FILTER	1.7	0.11	0.7214	NA	NA	NA	1.7	0.0	2.2	0.0	3.1	3.0
J037	chr12	130872126	130872583	TRUE	OK	5740.5	0.00382	0.3261	0.782	-0.111	-0.055	5596.3	5462.7	5336.5	5869.4	6141.6	6036.1
J038	chr12	130872126	130872835	TRUE	OK	143.1	0.00617	0.5604	0.8697	0.087	0.044	122.0	137.6	121.9	160.1	148.7	168.5
J039	chr12	130872617	130872835	TRUE	OK	3.9	0.11	0.9237	0.982	0.073	0.037	4.3	4.9	1.1	4.9	1.0	7.1
J040	chr12	130872629	130872835	TRUE	OK	9417.2	0.00428	0.4202	0.8184	-0.098	-0.049	9010.8	8886.5	8824.0	9867.0	10128.5	9786.4
J041	chr12	130872629	130875654	FALSE	LOW_COUNTS_INDEP_FILTER	0.7	0.169	0.9299	NA	NA	NA	0.0	2.0	0.0	1.0	1.0	0.0
J042	chr12	130872912	130873002	FALSE	LOW_COUNTS_INDEP_FILTER	2.5	0.0579	0.9653	NA	NA	NA	3.4	0.0	3.3	2.0	2.1	4.0
J043	chr12	130872920	130873002	TRUE	OK	13200.4	0.00388	0.4112	0.8148	-0.096	-0.048	12580.5	12593.3	12165.2	13772.7	14490.4	13600.3
J044	chr12	130872964	130874545	FALSE	LOW_COUNTS_INDEP_FILTER	0.3	0.642	0.4065	NA	NA	NA	0.0	0.0	0.0	0.0	0.0	2.0
J045	chr12	130873128	130874033	TRUE	OK	3.2	0.0994	0.9685	0.9932	-0.037	-0.019	2.6	1.0	5.5	2.0	2.1	6.1
J046	chr12	130873128	130874545	TRUE	OK	12860.5	0.00391	0.7921	0.9454	-0.036	-0.018	12557.4	11944.0	11276.1	13643.3	14778.5	12963.8
J047	chr12	130873128	130874550	TRUE	OK	30.9	0.018	0.9458	0.9877	0.012	0.006	32.4	27.7	24.4	41.5	26.2	33.3
J048	chr12	130874084	130874545	FALSE	LOW_COUNTS_INDEP_FILTER	2.6	0.0637	0.1627	NA	NA	NA	0.0	2.0	2.2	2.0	3.1	6.1
J049	chr12	130874733	130875611	TRUE	OK	11385.4	0.00404	0.1227	0.663	-0.170	-0.085	11795.7	10457.3	10675.3	11612.3	13020.7	10750.8
J050	chr12	130875782	130875881	TRUE	OK	10565.4	0.00137	0.5309	0.859	-0.033	-0.016	9934.6	9615.0	9830.6	10291.0	13539.3	10181.8

Color Codes
NO TEST	p > 0.05	p < 0.05	p < 0.005	p < 5e-04	p < 5e-05

Gene ENSG00000132341.12
expr	exprTX	normCt	normCtTX	rExpr	rExprTX	rawCt	rawCtTX
PLOT	PLOT	PLOT	PLOT	PLOT	PLOT	PLOT	PLOT
TABLE	TABLE	TABLE	TABLE	TABLE	TABLE	TABLE	TABLE