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| binID | chr | start | end | testable | status | baseMean | dispersion | pvalue | padjust | log2FC (mutant/control) | log2FCvst (mutant/control) | Normalized Coverage Counts | |||||
| MCF10A-parental-DMSO-1 | MCF10A-parental-DMSO-2 | MCF10A-parental-DMSO-3 | MCF10A-KI-DMSO-7 | MCF10A-KI-DMSO-8 | MCF10A-KI-DMSO-9 | ||||||||||||
| E001 | chr4 | 57030772 | 57031336 | TRUE | OK | 1535.6 | 0.00156 | 1.233e-259 | 1.807e-254 | 3.711 | 1.834 | 1667.6 | 1734.1 | 1614.0 | 1222.5 | 1781.8 | 1193.3 |
| E002 | chr4 | 57032037 | 57032425 | TRUE | OK | 7.3 | 0.0633 | 0.05665 | 0.5514 | -1.385 | -0.692 | 10.2 | 7.9 | 18.8 | 4.0 | 1.0 | 2.0 |
| E003 | chr4 | 57032425 | 57032552 | TRUE | OK | 367.6 | 0.00201 | 4.442e-135 | 2.79e-130 | -3.257 | -1.628 | 704.6 | 705.7 | 656.3 | 50.4 | 46.1 | 42.4 |
| E004 | chr4 | 57033194 | 57033311 | TRUE | OK | 342.5 | 0.00258 | 4.52e-117 | 2.208e-112 | -3.265 | -1.632 | 680.7 | 656.2 | 590.9 | 43.5 | 49.2 | 34.3 |
| E005 | chr4 | 57040823 | 57040933 | TRUE | OK | 366.5 | 0.00164 | 1.439e-157 | 1.055e-152 | -3.462 | -1.731 | 713.1 | 694.8 | 668.5 | 36.6 | 55.5 | 30.3 |
| E006 | chr4 | 57065488 | 57065603 | FALSE | ALL_ZERO | 0.0 | NA | NA | NA | NA | NA | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 |
| E007 | chr4 | 57109876 | 57110385 | TRUE | OK | 553.9 | 0.00209 | 3.063e-196 | 2.693e-191 | -3.615 | -1.807 | 1091.0 | 1033.4 | 1005.4 | 49.4 | 86.9 | 57.5 |
| J008 | chr4 | 57031336 | 57032425 | TRUE | OK | 263.7 | 0.00192 | 1.445e-104 | 5.775e-100 | -3.119 | -1.559 | 477.7 | 509.7 | 493.3 | 36.6 | 35.6 | 29.3 |
| J009 | chr4 | 57032552 | 57033194 | TRUE | OK | 220.5 | 0.00278 | 2.009e-85 | 6.794e-81 | -3.234 | -1.617 | 450.4 | 410.8 | 384.7 | 27.7 | 27.2 | 22.2 |
| J010 | chr4 | 57033311 | 57040823 | TRUE | OK | 186.1 | 0.00312 | 1.649e-71 | 4.832e-67 | -3.157 | -1.578 | 380.4 | 358.3 | 310.4 | 19.8 | 30.4 | 17.1 |
| J011 | chr4 | 57040933 | 57065488 | FALSE | ALL_ZERO | 0.0 | NA | NA | NA | NA | NA | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 |
| J012 | chr4 | 57040933 | 57109876 | TRUE | OK | 269.2 | 0.00143 | 3.202e-131 | 1.76e-126 | -3.452 | -1.726 | 517.8 | 504.8 | 507.7 | 24.7 | 38.8 | 21.2 |
| N013 | chr4 | 57030399 | 57030898 | TRUE | OK | 1061.4 | 0.000717 | 0 | 0 | 3.046 | 1.518 | 969.0 | 958.1 | 901.2 | 1018.9 | 1510.5 | 1010.7 |
| Color Codes | |||||
|---|---|---|---|---|---|
| NO TEST | p > 0.05 | p < 0.05 | p < 0.005 | p < 5e-04 | p < 5e-05 |
| Gene ENSG00000163453.11 | |||||||
|---|---|---|---|---|---|---|---|
| expr | exprTX | normCt | normCtTX | rExpr | rExprTX | rawCt | rawCtTX |
| PLOT | PLOT | PLOT | PLOT | PLOT | PLOT | PLOT | PLOT |
| TABLE | TABLE | TABLE | TABLE | TABLE | TABLE | TABLE | TABLE |