<<

< Prev Gene

TOP

Next Gene >

>>

Normalized Counts Table (ENSG00000063177.13)

binID	chr	start	end	testable	status	baseMean	dispersion	pvalue	padjust	log2FC (mutant/control)	log2FCvst (mutant/control)	Normalized Coverage Counts
												MCF10A-parental-DMSO-1	MCF10A-parental-DMSO-2	MCF10A-parental-DMSO-3	MCF10A-KI-DMSO-7	MCF10A-KI-DMSO-8	MCF10A-KI-DMSO-9
E001	chr19	48615327	48615329	TRUE	OK	12.8	0.0108	0.2837	0.7641	-0.409	-0.205	16.2	13.9	12.2	10.9	13.6	10.1
E002	chr19	48615329	48615330	TRUE	OK	23.3	0.00763	0.6544	0.9023	-0.143	-0.072	23.0	24.7	23.3	23.7	23.0	22.2
E003	chr19	48615330	48615331	TRUE	OK	83.5	0.012	0.5034	0.849	-0.112	-0.056	70.8	91.1	89.8	68.2	127.8	53.5
E004	chr19	48615331	48615332	TRUE	OK	128.3	0.00389	0.1534	0.6913	-0.200	-0.100	120.3	132.6	145.2	101.8	176.0	93.8
E005	chr19	48615332	48615335	TRUE	OK	165.2	0.00317	0.3203	0.7794	-0.123	-0.062	151.0	170.2	178.5	141.3	226.3	124.1
E006	chr19	48615335	48615365	TRUE	OK	3134.8	0.00499	0.5781	0.876	-0.045	-0.023	2746.6	3285.2	3179.3	2573.5	4447.8	2576.2
E007	chr19	48615365	48615392	TRUE	OK	5787.3	0.00298	0.7789	0.9417	0.048	0.024	5235.5	5670.6	5608.1	4974.0	8333.1	4902.3
E008	chr19	48615392	48615447	TRUE	OK	9243.8	0.00293	0.104	0.64	0.170	0.085	8491.3	8750.9	8304.1	8358.9	13565.4	7991.9
E009	chr19	48615447	48615876	TRUE	OK	240.7	0.00245	2.794e-13	4.618e-10	0.839	0.419	145.0	181.1	170.7	261.9	420.1	265.3
E010	chr19	48615876	48615905	TRUE	OK	11401.5	0.00375	0.08959	0.6198	0.199	0.099	10704.8	10624.6	10063.4	10265.3	16825.3	9925.6
E011	chr19	48615905	48615946	TRUE	OK	12688.6	0.00432	0.07326	0.5899	0.219	0.110	12124.1	11725.2	11006.7	11583.7	18607.2	11084.6
E012	chr19	48615946	48615981	TRUE	OK	339.5	0.00331	1.473e-35	1.439e-31	1.485	0.743	148.4	173.2	192.9	469.4	626.4	426.7
E013	chr19	48615981	48616078	TRUE	OK	111.5	0.00398	0.05132	0.537	0.310	0.155	96.4	84.1	106.4	99.8	179.1	102.9
E014	chr19	48616078	48616202	TRUE	OK	24029.1	0.00482	0.6895	0.914	-0.025	-0.012	23792.8	22642.7	23339.3	21081.1	32706.9	20611.8
E015	chr19	48616202	48616220	TRUE	OK	354.1	0.00238	5.008e-18	1.561e-14	0.902	0.451	216.7	268.2	225.0	419.0	600.2	395.4
E016	chr19	48616220	48616265	TRUE	OK	54.1	0.00444	0.003341	0.1619	0.577	0.288	48.6	39.6	35.5	53.4	91.1	56.5
E017	chr19	48616265	48616425	TRUE	OK	79.5	0.00753	0.01052	0.2946	0.487	0.243	75.9	64.3	48.8	92.9	116.3	78.7
E018	chr19	48616425	48616725	TRUE	OK	282.2	0.00217	0.000253	0.03092	0.376	0.188	253.3	222.7	230.6	274.7	406.4	305.6
E019	chr19	48616725	48616824	TRUE	OK	22920.7	0.00533	0.6786	0.9105	-0.046	-0.023	23380.8	21574.7	21803.9	20550.4	30237.9	19976.3
E020	chr19	48616824	48617157	TRUE	OK	389.5	0.0032	1.832e-09	1.423e-06	0.677	0.338	248.2	308.8	308.2	406.2	630.6	434.8
E021	chr19	48617157	48617315	TRUE	OK	64.1	0.014	0.4074	0.8131	0.170	0.085	69.1	52.5	52.1	69.2	69.1	72.6
E022	chr19	48617315	48617415	TRUE	OK	22270.5	0.00453	0.1812	0.7115	-0.171	-0.085	22614.0	21563.9	21821.7	20283.5	27803.4	19536.5
E023	chr19	48617415	48617423	TRUE	OK	14379.1	0.0123	0.3055	0.7733	-0.230	-0.115	15592.3	14269.0	13839.1	13880.4	16013.5	12680.4
E024	chr19	48617423	48617790	TRUE	OK	293.7	0.0092	0.000401	0.04256	0.598	0.299	241.4	227.7	202.9	385.4	397.0	307.7
E025	chr19	48617790	48617797	TRUE	OK	13977.6	0.0128	0.334	0.785	-0.222	-0.111	15221.3	13830.5	13397.9	13561.2	15523.3	12331.4
E026	chr19	48617797	48617877	TRUE	OK	13273.2	0.0131	0.3658	0.7971	-0.213	-0.106	14480.9	13139.6	12670.6	12975.2	14647.5	11725.2
E027	chr19	48617877	48617884	TRUE	OK	362.0	0.00899	0.4185	0.8178	0.109	0.055	319.0	380.1	308.2	359.7	415.9	389.4
E028	chr19	48617884	48618559	TRUE	OK	87.3	0.0335	0.3174	0.7782	0.293	0.147	91.3	81.2	53.2	84.0	91.1	123.1
E029	chr19	48618559	48619127	TRUE	OK	116.2	0.0105	0.2737	0.7599	0.195	0.097	110.0	103.9	98.7	123.5	127.8	133.1
E030	chr19	48619127	48619140	TRUE	OK	10.0	0.015	0.4592	0.8327	0.295	0.148	10.2	8.9	6.7	12.8	11.5	10.1
E031	chr19	48619140	48619163	TRUE	OK	5490.3	0.0149	0.2088	0.7285	-0.292	-0.146	6312.8	5587.4	5408.6	5454.3	5375.9	4802.4
E032	chr19	48619163	48619164	TRUE	OK	696.0	0.0141	0.9295	0.9836	-0.050	-0.025	756.6	668.1	625.2	726.4	703.9	696.0
E033	chr19	48619164	48619168	TRUE	OK	374.7	0.0134	0.3962	0.8084	0.138	0.069	391.5	336.5	302.6	387.4	412.7	417.6
E034	chr19	48619168	48619175	TRUE	OK	291.6	0.0132	0.2808	0.7629	0.188	0.094	292.6	258.3	236.1	308.3	321.6	332.9
E035	chr19	48619175	48619176	TRUE	OK	228.2	0.0166	0.2457	0.7476	0.237	0.118	222.6	186.1	196.2	244.1	243.0	277.4
E036	chr19	48619176	48619177	TRUE	OK	214.6	0.0168	0.1845	0.7137	0.278	0.139	203.9	175.2	180.7	234.2	229.4	264.3
E037	chr19	48619177	48619178	TRUE	OK	213.6	0.0167	0.1818	0.7121	0.279	0.139	202.2	174.2	180.7	234.2	228.4	262.3
E038	chr19	48619178	48619181	TRUE	OK	194.7	0.0194	0.3499	0.7911	0.203	0.102	188.5	162.3	171.8	213.5	195.9	236.0
E039	chr19	48619181	48619183	TRUE	OK	174.3	0.0169	0.3492	0.7909	0.191	0.095	166.3	146.5	157.4	195.7	178.1	201.7
E040	chr19	48619183	48619184	TRUE	OK	123.6	0.0345	0.8799	0.9705	0.022	0.011	104.9	108.9	141.9	146.3	101.6	138.2
J041	chr19	48615447	48615876	TRUE	OK	9149.8	0.00267	0.1375	0.677	0.151	0.076	8456.4	8699.4	8259.8	8220.5	13371.7	7891.1
J042	chr19	48615447	48616725	TRUE	OK	5.6	0.0359	0.2678	0.7573	-0.674	-0.337	2.6	8.9	8.9	3.0	6.3	4.0
J043	chr19	48615905	48616725	TRUE	OK	5.6	0.0228	0.03349	0.4698	1.230	0.615	4.3	4.9	0.0	4.9	11.5	8.1
J044	chr19	48615946	48616078	TRUE	OK	11251.2	0.00437	0.1107	0.6497	0.198	0.099	10916.3	10339.5	9721.9	10220.8	16504.8	9803.6
J045	chr19	48616202	48616725	TRUE	OK	17158.6	0.00272	0.07637	0.5963	-0.152	-0.076	17806.6	16307.0	16989.5	14912.2	22257.8	14678.6
J046	chr19	48616220	48616725	TRUE	OK	10.3	0.0607	0.9342	0.9847	-0.059	-0.030	16.2	4.9	8.9	4.9	16.8	10.1
J047	chr19	48616824	48617315	TRUE	OK	14535.5	0.0012	0.3578	0.7944	-0.046	-0.023	14362.3	13789.0	14341.2	12690.6	19499.7	12530.1
J048	chr19	48617415	48617790	TRUE	OK	101.5	0.00487	0.002532	0.1388	-0.514	-0.257	135.6	102.9	107.5	73.1	107.9	81.7
J049	chr19	48617423	48617790	TRUE	OK	13815.1	0.0128	0.3485	0.7907	-0.217	-0.108	15008.0	13673.1	13241.5	13412.0	15354.6	12201.3
J050	chr19	48617423	48619140	FALSE	LOW_COUNTS_INDEP_FILTER	2.0	0.227	0.0779	NA	NA	NA	2.6	1.0	6.7	2.0	0.0	0.0
J051	chr19	48617877	48618559	TRUE	OK	28.1	0.0235	0.3501	0.7912	0.310	0.155	15.4	26.7	31.0	35.6	38.8	21.2
J052	chr19	48617877	48619140	TRUE	OK	5493.4	0.0154	0.2206	0.7356	-0.290	-0.145	6317.1	5588.4	5403.0	5459.3	5383.2	4809.5

Color Codes
NO TEST	p > 0.05	p < 0.05	p < 0.005	p < 5e-04	p < 5e-05

Gene ENSG00000063177.13
expr	exprTX	normCt	normCtTX	rExpr	rExprTX	rawCt	rawCtTX
PLOT	PLOT	PLOT	PLOT	PLOT	PLOT	PLOT	PLOT
TABLE	TABLE	TABLE	TABLE	TABLE	TABLE	TABLE	TABLE