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binID | chr | start | end | testable | status | baseMean | dispersion | pvalue | padjust | log2FC (mutant/control) | log2FCvst (mutant/control) | Normalized Coverage Counts | |||||
MCF10A-parental-DMSO-1 | MCF10A-parental-DMSO-2 | MCF10A-parental-DMSO-3 | MCF10A-KI-DMSO-7 | MCF10A-KI-DMSO-8 | MCF10A-KI-DMSO-9 | ||||||||||||
E001 | chr16 | 56608583 | 56608594 | TRUE | OK | 7803.7 | 0.00606 | 0.4056 | 0.8126 | -0.132 | -0.066 | 7912.2 | 8381.7 | 8505.9 | 7153.2 | 8189.5 | 6679.6 |
E002 | chr16 | 56608594 | 56608605 | TRUE | OK | 97295.0 | 0.00612 | 0.009559 | 0.2819 | -0.369 | -0.184 | 107505.1 | 103626.5 | 111431.9 | 81755.8 | 100336.1 | 79114.5 |
E003 | chr16 | 56608605 | 56608683 | TRUE | OK | 260628.8 | 0.00563 | 0.001235 | 0.08951 | -0.434 | -0.216 | 276384.9 | 265188.2 | 278185.5 | 216168.3 | 310215.1 | 217630.6 |
E004 | chr16 | 56608683 | 56608689 | TRUE | OK | 1895.8 | 0.00859 | 0.4308 | 0.8223 | -0.144 | -0.072 | 1766.5 | 2092.4 | 2193.8 | 1458.7 | 2009.2 | 1854.0 |
E005 | chr16 | 56608689 | 56608804 | TRUE | OK | 682.5 | 0.0106 | 0.6741 | 0.9091 | 0.046 | 0.023 | 759.1 | 677.0 | 607.5 | 609.8 | 733.3 | 708.1 |
E006 | chr16 | 56608804 | 56608991 | TRUE | OK | 3027.8 | 0.00244 | 9.662e-35 | 8.496e-31 | 1.036 | 0.518 | 2056.5 | 1999.4 | 2039.7 | 3695.2 | 4777.8 | 3598.0 |
E007 | chr16 | 56608991 | 56609057 | TRUE | OK | 315002.4 | 0.00663 | 0.03992 | 0.4981 | -0.292 | -0.142 | 322084.5 | 313841.9 | 328951.3 | 262049.4 | 395530.7 | 267556.3 |
E008 | chr16 | 56609057 | 56609262 | TRUE | OK | 7586.3 | 0.00231 | 0.04953 | 0.5315 | 0.147 | 0.074 | 6805.9 | 7147.4 | 8004.8 | 6715.4 | 9659.2 | 7185.0 |
E009 | chr16 | 56609262 | 56609476 | TRUE | OK | 325040.5 | 0.0137 | 0.6955 | 0.9158 | 0.099 | 0.047 | 330349.8 | 322838.3 | 335050.5 | 270774.0 | 413458.1 | 277772.4 |
E010 | chr16 | 56609476 | 56609494 | TRUE | OK | 21281.0 | 0.00697 | 0.2613 | 0.7539 | 0.137 | 0.069 | 23072.9 | 21081.8 | 17773.3 | 19109.5 | 26784.2 | 19864.4 |
E011 | chr16 | 56609494 | 56609497 | TRUE | OK | 3173.7 | 0.00301 | 0.09575 | 0.629 | -0.145 | -0.073 | 3674.6 | 3146.6 | 3309.0 | 2442.0 | 4039.3 | 2431.0 |
J012 | chr16 | 56608683 | 56608991 | TRUE | OK | 260183.4 | 0.00527 | 0.000935 | 0.07502 | -0.430 | -0.214 | 275770.7 | 264721.0 | 277758.8 | 215695.9 | 309931.2 | 217223.1 |
J013 | chr16 | 56608804 | 56608991 | TRUE | OK | 117.9 | 0.00583 | 0.1422 | 0.6814 | 0.235 | 0.118 | 103.2 | 127.7 | 98.7 | 98.8 | 152.9 | 126.1 |
J014 | chr16 | 56609057 | 56609262 | TRUE | OK | 292429.6 | 0.00199 | 0.05789 | 0.5544 | -0.130 | -0.064 | 298560.4 | 291200.2 | 305502.3 | 240919.9 | 371174.7 | 247219.8 |
N015 | chr16 | 56609057 | 56609182 | TRUE | OK | 46.6 | 0.00858 | 0.01013 | 0.2901 | -0.618 | -0.309 | 68.2 | 42.6 | 59.9 | 33.6 | 46.1 | 29.3 |
Color Codes | |||||
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NO TEST | p > 0.05 | p < 0.05 | p < 0.005 | p < 5e-04 | p < 5e-05 |
Gene ENSG00000125148.7 | |||||||
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expr | exprTX | normCt | normCtTX | rExpr | rExprTX | rawCt | rawCtTX |
PLOT | PLOT | PLOT | PLOT | PLOT | PLOT | PLOT | PLOT |
TABLE | TABLE | TABLE | TABLE | TABLE | TABLE | TABLE | TABLE |