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Raw Counts Table (ENSG00000063177.13)

binID	chr	start	end	testable	status	baseMean	dispersion	pvalue	padjust	log2FC (mutant/control)	log2FCvst (mutant/control)	Raw Counts
												MCF10A-parental-DMSO-1	MCF10A-parental-DMSO-2	MCF10A-parental-DMSO-3	MCF10A-KI-DMSO-7	MCF10A-KI-DMSO-8	MCF10A-KI-DMSO-9
E001	chr19	48615327	48615329	TRUE	OK	12.8	0.0108	0.2837	0.7641	-0.409	-0.205	19.0	14.0	11.0	11.0	13.0	10.0
E002	chr19	48615329	48615330	TRUE	OK	23.3	0.00763	0.6544	0.9023	-0.143	-0.072	27.0	25.0	21.0	24.0	22.0	22.0
E003	chr19	48615330	48615331	TRUE	OK	83.5	0.012	0.5034	0.849	-0.112	-0.056	83.0	92.0	81.0	69.0	122.0	53.0
E004	chr19	48615331	48615332	TRUE	OK	128.3	0.00389	0.1534	0.6913	-0.200	-0.100	141.0	134.0	131.0	103.0	168.0	93.0
E005	chr19	48615332	48615335	TRUE	OK	165.2	0.00317	0.3203	0.7794	-0.123	-0.062	177.0	172.0	161.0	143.0	216.0	123.0
E006	chr19	48615335	48615365	TRUE	OK	3134.8	0.00499	0.5781	0.876	-0.045	-0.023	3220.0	3319.0	2868.0	2604.0	4246.0	2554.0
E007	chr19	48615365	48615392	TRUE	OK	5787.3	0.00298	0.7789	0.9417	0.048	0.024	6138.0	5729.0	5059.0	5033.0	7955.0	4860.0
E008	chr19	48615392	48615447	TRUE	OK	9243.8	0.00293	0.104	0.64	0.170	0.085	9955.0	8841.0	7491.0	8458.0	12950.0	7923.0
E009	chr19	48615447	48615876	TRUE	OK	240.7	0.00245	2.794e-13	4.618e-10	0.839	0.419	170.0	183.0	154.0	265.0	401.0	263.0
E010	chr19	48615876	48615905	TRUE	OK	11401.5	0.00375	0.08959	0.6198	0.199	0.099	12550.0	10734.0	9078.0	10387.0	16062.0	9840.0
E011	chr19	48615905	48615946	TRUE	OK	12688.6	0.00432	0.07326	0.5899	0.219	0.110	14214.0	11846.0	9929.0	11721.0	17763.0	10989.0
E012	chr19	48615946	48615981	TRUE	OK	339.5	0.00331	1.473e-35	1.439e-31	1.485	0.743	174.0	175.0	174.0	475.0	598.0	423.0
E013	chr19	48615981	48616078	TRUE	OK	111.5	0.00398	0.05132	0.537	0.310	0.155	113.0	85.0	96.0	101.0	171.0	102.0
E014	chr19	48616078	48616202	TRUE	OK	24029.1	0.00482	0.6895	0.914	-0.025	-0.012	27894.0	22876.0	21054.0	21331.0	31223.0	20434.0
E015	chr19	48616202	48616220	TRUE	OK	354.1	0.00238	5.008e-18	1.561e-14	0.902	0.451	254.0	271.0	203.0	424.0	573.0	392.0
E016	chr19	48616220	48616265	TRUE	OK	54.1	0.00444	0.003341	0.1619	0.577	0.288	57.0	40.0	32.0	54.0	87.0	56.0
E017	chr19	48616265	48616425	TRUE	OK	79.5	0.00753	0.01052	0.2946	0.487	0.243	89.0	65.0	44.0	94.0	111.0	78.0
E018	chr19	48616425	48616725	TRUE	OK	282.2	0.00217	0.000253	0.03092	0.376	0.188	297.0	225.0	208.0	278.0	388.0	303.0
E019	chr19	48616725	48616824	TRUE	OK	22920.7	0.00533	0.6786	0.9105	-0.046	-0.023	27411.0	21797.0	19669.0	20794.0	28866.0	19804.0
E020	chr19	48616824	48617157	TRUE	OK	389.5	0.0032	1.832e-09	1.423e-06	0.677	0.338	291.0	312.0	278.0	411.0	602.0	431.0
E021	chr19	48617157	48617315	TRUE	OK	64.1	0.014	0.4074	0.8131	0.170	0.085	81.0	53.0	47.0	70.0	66.0	72.0
E022	chr19	48617315	48617415	TRUE	OK	22270.5	0.00453	0.1812	0.7115	-0.171	-0.085	26512.0	21786.0	19685.0	20524.0	26542.0	19368.0
E023	chr19	48617415	48617423	TRUE	OK	14379.1	0.0123	0.3055	0.7733	-0.230	-0.115	18280.0	14416.0	12484.0	14045.0	15287.0	12571.0
E024	chr19	48617423	48617790	TRUE	OK	293.7	0.0092	0.000401	0.04256	0.598	0.299	283.0	230.0	183.0	390.0	379.0	305.0
E025	chr19	48617790	48617797	TRUE	OK	13977.6	0.0128	0.334	0.785	-0.222	-0.111	17845.0	13973.0	12086.0	13722.0	14819.0	12225.0
E026	chr19	48617797	48617877	TRUE	OK	13273.2	0.0131	0.3658	0.7971	-0.213	-0.106	16977.0	13275.0	11430.0	13129.0	13983.0	11624.0
E027	chr19	48617877	48617884	TRUE	OK	362.0	0.00899	0.4185	0.8178	0.109	0.055	374.0	384.0	278.0	364.0	397.0	386.0
E028	chr19	48617884	48618559	TRUE	OK	87.3	0.0335	0.3174	0.7782	0.293	0.147	107.0	82.0	48.0	85.0	87.0	122.0
E029	chr19	48618559	48619127	TRUE	OK	116.2	0.0105	0.2737	0.7599	0.195	0.097	129.0	105.0	89.0	125.0	122.0	132.0
E030	chr19	48619127	48619140	TRUE	OK	10.0	0.015	0.4592	0.8327	0.295	0.148	12.0	9.0	6.0	13.0	11.0	10.0
E031	chr19	48619140	48619163	TRUE	OK	5490.3	0.0149	0.2088	0.7285	-0.292	-0.146	7401.0	5645.0	4879.0	5519.0	5132.0	4761.0
E032	chr19	48619163	48619164	TRUE	OK	696.0	0.0141	0.9295	0.9836	-0.050	-0.025	887.0	675.0	564.0	735.0	672.0	690.0
E033	chr19	48619164	48619168	TRUE	OK	374.7	0.0134	0.3962	0.8084	0.138	0.069	459.0	340.0	273.0	392.0	394.0	414.0
E034	chr19	48619168	48619175	TRUE	OK	291.6	0.0132	0.2808	0.7629	0.188	0.094	343.0	261.0	213.0	312.0	307.0	330.0
E035	chr19	48619175	48619176	TRUE	OK	228.2	0.0166	0.2457	0.7476	0.237	0.118	261.0	188.0	177.0	247.0	232.0	275.0
E036	chr19	48619176	48619177	TRUE	OK	214.6	0.0168	0.1845	0.7137	0.278	0.139	239.0	177.0	163.0	237.0	219.0	262.0
E037	chr19	48619177	48619178	TRUE	OK	213.6	0.0167	0.1818	0.7121	0.279	0.139	237.0	176.0	163.0	237.0	218.0	260.0
E038	chr19	48619178	48619181	TRUE	OK	194.7	0.0194	0.3499	0.7911	0.203	0.102	221.0	164.0	155.0	216.0	187.0	234.0
E039	chr19	48619181	48619183	TRUE	OK	174.3	0.0169	0.3492	0.7909	0.191	0.095	195.0	148.0	142.0	198.0	170.0	200.0
E040	chr19	48619183	48619184	TRUE	OK	123.6	0.0345	0.8799	0.9705	0.022	0.011	123.0	110.0	128.0	148.0	97.0	137.0
J041	chr19	48615447	48615876	TRUE	OK	9149.8	0.00267	0.1375	0.677	0.151	0.076	9914.0	8789.0	7451.0	8318.0	12765.0	7823.0
J042	chr19	48615447	48616725	TRUE	OK	5.6	0.0359	0.2678	0.7573	-0.674	-0.337	3.0	9.0	8.0	3.0	6.0	4.0
J043	chr19	48615905	48616725	TRUE	OK	5.6	0.0228	0.03349	0.4698	1.230	0.615	5.0	5.0	0.0	5.0	11.0	8.0
J044	chr19	48615946	48616078	TRUE	OK	11251.2	0.00437	0.1107	0.6497	0.198	0.099	12798.0	10446.0	8770.0	10342.0	15756.0	9719.0
J045	chr19	48616202	48616725	TRUE	OK	17158.6	0.00272	0.07637	0.5963	-0.152	-0.076	20876.0	16475.0	15326.0	15089.0	21248.0	14552.0
J046	chr19	48616220	48616725	TRUE	OK	10.3	0.0607	0.9342	0.9847	-0.059	-0.030	19.0	5.0	8.0	5.0	16.0	10.0
J047	chr19	48616824	48617315	TRUE	OK	14535.5	0.0012	0.3578	0.7944	-0.046	-0.023	16838.0	13931.0	12937.0	12841.0	18615.0	12422.0
J048	chr19	48617415	48617790	TRUE	OK	101.5	0.00487	0.002532	0.1388	-0.514	-0.257	159.0	104.0	97.0	74.0	103.0	81.0
J049	chr19	48617423	48617790	TRUE	OK	13815.1	0.0128	0.3485	0.7907	-0.217	-0.108	17595.0	13814.0	11945.0	13571.0	14658.0	12096.0
J050	chr19	48617423	48619140	FALSE	LOW_COUNTS_INDEP_FILTER	2.0	0.227	0.0779	NA	NA	NA	3.0	1.0	6.0	2.0	0.0	0.0
J051	chr19	48617877	48618559	TRUE	OK	28.1	0.0235	0.3501	0.7912	0.310	0.155	18.0	27.0	28.0	36.0	37.0	21.0
J052	chr19	48617877	48619140	TRUE	OK	5493.4	0.0154	0.2206	0.7356	-0.290	-0.145	7406.0	5646.0	4874.0	5524.0	5139.0	4768.0

Color Codes
NO TEST	p > 0.05	p < 0.05	p < 0.005	p < 5e-04	p < 5e-05

Gene ENSG00000063177.13
expr	exprTX	normCt	normCtTX	rExpr	rExprTX	rawCt	rawCtTX
PLOT	PLOT	PLOT	PLOT	PLOT	PLOT	PLOT	PLOT
TABLE	TABLE	TABLE	TABLE	TABLE	TABLE	TABLE	TABLE