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binID | chr | start | end | testable | status | baseMean | dispersion | pvalue | padjust | log2FC (mutant/control) | log2FCvst (mutant/control) | Normalized Coverage Counts | |||||
MCF10A-parental-DMSO-1 | MCF10A-parental-DMSO-2 | MCF10A-parental-DMSO-3 | MCF10A-KI-DMSO-7 | MCF10A-KI-DMSO-8 | MCF10A-KI-DMSO-9 | ||||||||||||
E001 | chr11 | 126340888 | 126342322 | TRUE | OK | 308.6 | 0.0105 | 0.1848 | 0.7139 | 0.301 | 0.150 | 260.2 | 289.0 | 216.2 | 355.8 | 416.9 | 313.7 |
E002 | chr11 | 126350171 | 126351777 | TRUE | OK | 65.2 | 0.00517 | 0.2767 | 0.7613 | -0.225 | -0.112 | 58.9 | 68.3 | 52.1 | 69.2 | 67.0 | 75.7 |
E003 | chr11 | 126354378 | 126354915 | TRUE | OK | 28.5 | 0.0228 | 0.2728 | 0.7595 | -0.399 | -0.200 | 37.5 | 25.7 | 20.0 | 32.6 | 22.0 | 33.3 |
E004 | chr11 | 126355441 | 126355579 | TRUE | OK | 85.2 | 0.00411 | 0.9023 | 0.9764 | -0.034 | -0.017 | 83.6 | 82.2 | 53.2 | 95.9 | 99.5 | 96.8 |
E005 | chr11 | 126355579 | 126355587 | FALSE | ALL_ZERO | 0.0 | NA | NA | NA | NA | NA | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 |
J006 | chr11 | 126342322 | 126355441 | TRUE | OK | 71.8 | 0.00251 | 0.9972 | 0.9998 | -0.008 | -0.004 | 67.4 | 69.3 | 46.6 | 81.0 | 86.9 | 79.7 |
J007 | chr11 | 126351777 | 126354378 | FALSE | LOW_COUNTS_INDEP_FILTER | 0.5 | 0.754 | 0.2516 | NA | NA | NA | 0.0 | 3.0 | 0.0 | 0.0 | 0.0 | 0.0 |
J008 | chr11 | 126354915 | 126355441 | FALSE | LOW_COUNTS_INDEP_FILTER | 0.2 | 0.532 | 0.6745 | NA | NA | NA | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 1.0 |
N009 | chr11 | 126338399 | 126343306 | TRUE | OK | 386.2 | 0.0176 | 4.092e-51 | 9.994e-47 | -30.805 | -6.044 | 408.6 | 395.9 | 412.4 | 363.7 | 420.1 | 316.7 |
N010 | chr11 | 126343417 | 126345346 | TRUE | OK | 374.0 | 1.11 | 0.008861 | 0.2713 | -3.527 | -1.706 | 369.3 | 365.2 | 361.4 | 348.9 | 465.1 | 333.9 |
Color Codes | |||||
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NO TEST | p > 0.05 | p < 0.05 | p < 0.005 | p < 5e-04 | p < 5e-05 |
Gene ENSG00000280832.1 | |||||||
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expr | exprTX | normCt | normCtTX | rExpr | rExprTX | rawCt | rawCtTX |
PLOT | PLOT | PLOT | PLOT | PLOT | PLOT | PLOT | PLOT |
TABLE | TABLE | TABLE | TABLE | TABLE | TABLE | TABLE | TABLE |