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Normalized Counts Table (ENSG00000186281.12)

binID	chr	start	end	testable	status	baseMean	dispersion	pvalue	padjust	log2FC (mutant/control)	log2FCvst (mutant/control)	Normalized Coverage Counts
												MCF10A-parental-DMSO-1	MCF10A-parental-DMSO-2	MCF10A-parental-DMSO-3	MCF10A-KI-DMSO-7	MCF10A-KI-DMSO-8	MCF10A-KI-DMSO-9
E001	chr2	96021945	96021946	FALSE	LOW_COUNTS_INDEP_FILTER	2.4	0.0499	0.3616	NA	NA	NA	5.1	4.0	4.4	0.0	1.0	0.0
E002	chr2	96021946	96022033	TRUE	OK	24.7	0.0155	0.7314	0.927	-0.309	-0.155	52.9	36.6	55.4	2.0	1.0	0.0
E003	chr2	96022033	96022034	TRUE	OK	24.9	0.0162	0.7162	0.9225	-0.328	-0.164	54.6	36.6	55.4	2.0	1.0	0.0
E004	chr2	96022034	96022039	TRUE	OK	26.3	0.0127	0.6397	0.8978	-0.406	-0.203	55.4	40.6	58.8	2.0	1.0	0.0
E005	chr2	96022039	96022275	TRUE	OK	137.4	0.00905	8.891e-06	0.00221	-2.601	-1.300	276.4	242.5	301.5	2.0	1.0	1.0
E006	chr2	96022667	96022723	TRUE	OK	152.9	0.00296	1.934e-06	0.0006269	1.430	0.715	313.0	286.1	271.6	13.8	23.0	10.1
E007	chr2	96022957	96023023	TRUE	OK	163.0	0.00296	2.743e-12	3.745e-09	2.005	1.002	319.0	309.8	288.2	13.8	25.1	22.2
E008	chr2	96023023	96023105	TRUE	OK	22.2	0.00887	1.012e-52	2.617e-48	5.693	2.846	25.6	22.8	27.7	11.9	27.2	18.2
E009	chr2	96023105	96023226	TRUE	OK	147.9	0.00494	2.956e-08	1.688e-05	1.699	0.849	284.0	296.0	256.1	6.9	26.2	18.2
E010	chr2	96023226	96023308	TRUE	OK	14.4	0.0138	7.312e-25	4.23e-21	4.747	2.373	24.7	17.8	13.3	6.9	14.7	9.1
E011	chr2	96023308	96023440	TRUE	OK	140.8	0.0041	0.9866	0.9974	0.002	0.001	275.5	294.0	253.9	4.0	9.4	8.1
E012	chr2	96023440	96023922	TRUE	OK	16.3	0.00957	0.05296	0.5415	-22.779	-11.390	35.0	32.7	29.9	0.0	0.0	0.0
E013	chr2	96023922	96024000	TRUE	OK	72.2	0.0109	7.627e-06	0.001966	-25.027	-12.514	132.2	169.3	131.9	0.0	0.0	0.0
E014	chr2	96024188	96024337	TRUE	OK	107.3	0.00429	1.48e-08	9.115e-06	-25.667	-12.833	212.4	230.6	200.6	0.0	0.0	0.0
E015	chr2	96024426	96024667	TRUE	OK	172.2	0.00279	1.374e-13	2.388e-10	-26.489	-13.244	357.4	353.4	322.6	0.0	0.0	0.0
E016	chr2	96024667	96024685	TRUE	OK	73.3	0.019	1.141e-05	0.002716	-25.061	-12.530	184.2	143.5	112.0	0.0	0.0	0.0
E017	chr2	96024772	96024843	TRUE	OK	114.5	0.0102	1.206e-08	7.617e-06	-25.783	-12.891	268.7	226.7	191.8	0.0	0.0	0.0
E018	chr2	96024843	96025484	TRUE	OK	16.0	0.0121	0.05656	0.5511	-22.752	-11.376	30.7	37.6	27.7	0.0	0.0	0.0
E019	chr2	96025484	96025603	TRUE	OK	130.1	0.00318	2.517e-10	2.375e-07	-25.995	-12.997	280.6	247.5	252.7	0.0	0.0	0.0
E020	chr2	96025929	96026012	TRUE	OK	134.5	0.00435	1.579e-10	1.578e-07	-26.054	-13.027	296.8	267.2	242.8	0.0	0.0	0.0
E021	chr2	96026182	96026305	TRUE	OK	126.2	0.00651	1.017e-09	8.309e-07	-25.945	-12.972	290.0	238.5	228.4	0.0	0.0	0.0
E022	chr2	96026305	96026696	TRUE	OK	8.0	0.0219	0.2639	0.7553	-21.751	-10.875	19.6	11.9	16.6	0.0	0.0	0.0
E023	chr2	96026696	96026909	TRUE	OK	54.4	0.0187	0.0001597	0.02191	-24.597	-12.298	136.5	107.9	82.0	0.0	0.0	0.0
E024	chr2	96026909	96027006	FALSE	LOW_COUNTS_INDEP_FILTER	0.1	0.851	0.1778	NA	NA	NA	0.9	0.0	0.0	0.0	0.0	0.0
E025	chr2	96027006	96027106	TRUE	OK	22.1	0.0198	0.02142	0.3984	-23.235	-11.618	55.4	32.7	44.3	0.0	0.0	0.0
E026	chr2	96027418	96027552	TRUE	OK	13.5	0.0189	0.09181	0.6237	-22.507	-11.253	33.3	19.8	27.7	0.0	0.0	0.0
E027	chr2	96027552	96027990	FALSE	LOW_COUNTS_INDEP_FILTER	0.5	0.297	0.4416	NA	NA	NA	0.0	2.0	1.1	0.0	0.0	0.0
E028	chr2	96027990	96028090	TRUE	OK	7.9	0.0263	0.2696	0.758	-21.746	-10.873	21.3	11.9	14.4	0.0	0.0	0.0
E029	chr2	96030405	96030410	TRUE	OK	3.5	0.0786	1	1	-20.556	-10.278	10.2	3.0	7.8	0.0	0.0	0.0
E030	chr2	96030410	96030534	TRUE	OK	9.4	0.0412	0.2092	0.7287	-22.000	-11.000	27.3	16.8	12.2	0.0	0.0	0.0
E031	chr2	96030743	96030787	TRUE	OK	26.9	0.014	0.009265	0.2776	-23.518	-11.759	58.9	41.6	61.0	0.0	0.0	0.0
E032	chr2	96030787	96030848	TRUE	OK	39.3	0.0136	0.001283	0.09174	-24.093	-12.046	90.4	61.4	84.2	0.0	0.0	0.0
E033	chr2	96030848	96030850	FALSE	LOW_COUNTS_INDEP_FILTER	0.4	0.752	0.3275	NA	NA	NA	2.6	0.0	0.0	0.0	0.0	0.0
E034	chr2	96030850	96030920	FALSE	LOW_COUNTS_INDEP_FILTER	0.4	0.752	0.3275	NA	NA	NA	2.6	0.0	0.0	0.0	0.0	0.0
E035	chr2	96031260	96031334	TRUE	OK	103.8	0.00787	4.435e-08	2.44e-05	-25.617	-12.808	238.8	181.1	202.9	0.0	0.0	0.0
E036	chr2	96032032	96032146	TRUE	OK	159.1	0.00531	3.387e-12	4.518e-09	-26.348	-13.173	356.5	292.0	306.0	0.0	0.0	0.0
E037	chr2	96032296	96032365	TRUE	OK	162.7	0.00234	6.52e-13	9.783e-10	-26.384	-13.192	334.4	322.7	319.3	0.0	0.0	0.0
E038	chr2	96032365	96032419	TRUE	OK	107.9	0.00342	1.136e-08	7.257e-06	-25.680	-12.840	232.9	214.8	199.5	0.0	0.0	0.0
E039	chr2	96034816	96034852	TRUE	OK	49.4	0.00587	0.000199	0.02599	-24.445	-12.222	108.3	102.9	85.4	0.0	0.0	0.0
E040	chr2	96034852	96034915	TRUE	OK	88.2	0.00418	3.348e-07	0.0001414	-25.348	-12.674	179.1	188.1	161.8	0.0	0.0	0.0
E041	chr2	96034915	96034916	TRUE	OK	9.3	0.0195	0.201	0.7238	-21.968	-10.984	22.2	13.9	20.0	0.0	0.0	0.0
E042	chr2	96034916	96034918	TRUE	OK	9.2	0.022	0.2092	0.7288	-21.942	-10.971	22.2	12.9	20.0	0.0	0.0	0.0
E043	chr2	96034918	96034920	TRUE	OK	8.8	0.0209	0.2226	0.7366	-21.890	-10.945	21.3	12.9	18.8	0.0	0.0	0.0
E044	chr2	96034920	96034925	TRUE	OK	7.7	0.0229	0.2847	0.7645	-21.689	-10.844	19.6	11.9	14.4	0.0	0.0	0.0
E045	chr2	96034925	96034927	TRUE	OK	4.8	0.0274	0.5769	0.8757	-21.010	-10.505	11.1	8.9	8.9	0.0	0.0	0.0
E046	chr2	96034927	96034964	TRUE	OK	4.7	0.0275	0.6048	0.8851	-20.962	-10.481	10.2	8.9	8.9	0.0	0.0	0.0
E047	chr2	96034964	96035245	FALSE	LOW_COUNTS_INDEP_FILTER	0.3	0.719	0.2687	NA	NA	NA	0.0	2.0	0.0	0.0	0.0	0.0
E048	chr2	96035851	96035913	FALSE	ALL_ZERO	0.0	NA	NA	NA	NA	NA	0.0	0.0	0.0	0.0	0.0	0.0
E049	chr2	96035913	96035965	FALSE	ALL_ZERO	0.0	NA	NA	NA	NA	NA	0.0	0.0	0.0	0.0	0.0	0.0
E050	chr2	96035965	96035974	FALSE	ALL_ZERO	0.0	NA	NA	NA	NA	NA	0.0	0.0	0.0	0.0	0.0	0.0
E051	chr2	96039283	96039451	FALSE	ALL_ZERO	0.0	NA	NA	NA	NA	NA	0.0	0.0	0.0	0.0	0.0	0.0
J052	chr2	96022275	96022667	TRUE	OK	98.9	0.00348	1.472e-06	0.0004964	-4.091	-2.045	211.5	179.2	201.8	0.0	0.0	1.0
J053	chr2	96022723	96022957	TRUE	OK	116.4	0.00297	2.525e-09	1.872e-06	-25.805	-12.902	238.8	246.5	212.8	0.0	0.0	0.0
J054	chr2	96023023	96023105	TRUE	OK	91.2	0.00665	6.726e-06	0.001786	-3.962	-1.981	191.9	199.0	155.2	0.0	0.0	1.0
J055	chr2	96023226	96023308	TRUE	OK	86.5	0.00258	9.123e-06	0.002258	-3.874	-1.937	179.1	179.2	159.6	0.0	0.0	1.0
J056	chr2	96023440	96023922	TRUE	OK	49.0	0.00958	0.0002523	0.03087	-24.424	-12.212	89.6	114.8	89.8	0.0	0.0	0.0
J057	chr2	96024000	96024188	TRUE	OK	44.5	0.0167	0.0006388	0.05857	-24.275	-12.138	75.1	108.9	83.1	0.0	0.0	0.0
J058	chr2	96024337	96024426	TRUE	OK	65.1	0.00259	1.313e-05	0.003044	-24.865	-12.432	133.9	131.6	125.3	0.0	0.0	0.0
J059	chr2	96024667	96024772	TRUE	OK	10.6	0.01	0.152	0.6901	-22.155	-11.078	23.9	20.8	18.8	0.0	0.0	0.0
J060	chr2	96024685	96024772	TRUE	OK	66.1	0.0173	2.816e-05	0.00563	-24.898	-12.449	163.8	130.7	102.0	0.0	0.0	0.0
J061	chr2	96024843	96025484	TRUE	OK	81.1	0.00492	1.128e-06	0.000396	-25.219	-12.609	185.1	157.4	144.1	0.0	0.0	0.0
J062	chr2	96025603	96025929	TRUE	OK	85.9	0.00225	3.982e-07	0.000165	-25.303	-12.651	174.9	174.2	166.3	0.0	0.0	0.0
J063	chr2	96026012	96026182	TRUE	OK	96.8	0.00357	7.263e-08	3.739e-05	-25.505	-12.752	216.7	187.1	177.4	0.0	0.0	0.0
J064	chr2	96026305	96026696	TRUE	OK	52.7	0.0161	0.0001821	0.02416	-24.549	-12.274	129.7	105.9	80.9	0.0	0.0	0.0
J065	chr2	96026305	96027006	TRUE	OK	17.5	0.00928	0.04258	0.5086	-22.890	-11.445	41.8	28.7	34.4	0.0	0.0	0.0
J066	chr2	96026909	96027006	FALSE	LOW_COUNTS_INDEP_FILTER	2.5	0.181	1	NA	NA	NA	8.5	1.0	5.5	0.0	0.0	0.0
J067	chr2	96027106	96027418	TRUE	OK	10.7	0.0151	0.1503	0.6885	-22.177	-11.088	26.4	15.8	22.2	0.0	0.0	0.0
J068	chr2	96027552	96027990	TRUE	OK	3.8	0.0309	0.8601	0.9649	-20.685	-10.342	10.2	4.9	7.8	0.0	0.0	0.0
J069	chr2	96028090	96030405	TRUE	OK	3.3	0.125	1	1	-20.486	-10.243	10.2	2.0	7.8	0.0	0.0	0.0
J070	chr2	96030534	96030743	TRUE	OK	5.5	0.0476	0.4894	0.8437	-21.220	-10.610	15.4	11.9	5.5	0.0	0.0	0.0
J071	chr2	96030848	96031260	TRUE	OK	37.4	0.0163	0.001862	0.1158	-24.013	-12.007	83.6	56.4	84.2	0.0	0.0	0.0
J072	chr2	96030920	96031260	FALSE	LOW_COUNTS_INDEP_FILTER	0.3	0.541	0.2565	NA	NA	NA	1.7	0.0	0.0	0.0	0.0	0.0
J073	chr2	96031334	96032032	TRUE	OK	95.6	0.00731	1.496e-07	6.999e-05	-25.482	-12.741	220.9	167.3	185.1	0.0	0.0	0.0
J074	chr2	96032146	96032296	TRUE	OK	128.9	0.0023	2.488e-10	2.352e-07	-25.980	-12.990	278.9	247.5	247.2	0.0	0.0	0.0
J075	chr2	96032365	96034816	TRUE	OK	13.4	0.0268	0.09552	0.6285	-22.506	-11.253	28.1	34.6	17.7	0.0	0.0	0.0
J076	chr2	96032365	96034852	TRUE	OK	13.2	0.00794	0.0918	0.6237	-22.474	-11.237	28.1	25.7	25.5	0.0	0.0	0.0
J077	chr2	96032419	96034816	TRUE	OK	35.9	0.00419	0.001762	0.1121	-23.956	-11.978	79.3	68.3	67.6	0.0	0.0	0.0
J078	chr2	96032419	96034852	TRUE	OK	34.3	0.0042	0.002295	0.1312	-23.887	-11.944	72.5	71.3	62.1	0.0	0.0	0.0
J079	chr2	96035245	96035851	FALSE	ALL_ZERO	0.0	NA	NA	NA	NA	NA	0.0	0.0	0.0	0.0	0.0	0.0
J080	chr2	96035245	96035913	FALSE	ALL_ZERO	0.0	NA	NA	NA	NA	NA	0.0	0.0	0.0	0.0	0.0	0.0
J081	chr2	96035965	96039283	FALSE	ALL_ZERO	0.0	NA	NA	NA	NA	NA	0.0	0.0	0.0	0.0	0.0	0.0

Color Codes
NO TEST	p > 0.05	p < 0.05	p < 0.005	p < 5e-04	p < 5e-05

Gene ENSG00000186281.12
expr	exprTX	normCt	normCtTX	rExpr	rExprTX	rawCt	rawCtTX
PLOT	PLOT	PLOT	PLOT	PLOT	PLOT	PLOT	PLOT
TABLE	TABLE	TABLE	TABLE	TABLE	TABLE	TABLE	TABLE