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binID | chr | start | end | testable | status | baseMean | dispersion | pvalue | padjust | log2FC (mutant/control) | log2FCvst (mutant/control) | Raw Counts | |||||
MCF10A-parental-DMSO-1 | MCF10A-parental-DMSO-2 | MCF10A-parental-DMSO-3 | MCF10A-KI-DMSO-7 | MCF10A-KI-DMSO-8 | MCF10A-KI-DMSO-9 | ||||||||||||
E001 | chr11 | 126340888 | 126342322 | TRUE | OK | 308.6 | 0.0105 | 0.1848 | 0.7139 | 0.301 | 0.150 | 305.0 | 292.0 | 195.0 | 360.0 | 398.0 | 311.0 |
E002 | chr11 | 126350171 | 126351777 | TRUE | OK | 65.2 | 0.00517 | 0.2767 | 0.7613 | -0.225 | -0.112 | 69.0 | 69.0 | 47.0 | 70.0 | 64.0 | 75.0 |
E003 | chr11 | 126354378 | 126354915 | TRUE | OK | 28.5 | 0.0228 | 0.2728 | 0.7595 | -0.399 | -0.200 | 44.0 | 26.0 | 18.0 | 33.0 | 21.0 | 33.0 |
E004 | chr11 | 126355441 | 126355579 | TRUE | OK | 85.2 | 0.00411 | 0.9023 | 0.9764 | -0.034 | -0.017 | 98.0 | 83.0 | 48.0 | 97.0 | 95.0 | 96.0 |
E005 | chr11 | 126355579 | 126355587 | FALSE | ALL_ZERO | 0.0 | NA | NA | NA | NA | NA | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 |
J006 | chr11 | 126342322 | 126355441 | TRUE | OK | 71.8 | 0.00251 | 0.9972 | 0.9998 | -0.008 | -0.004 | 79.0 | 70.0 | 42.0 | 82.0 | 83.0 | 79.0 |
J007 | chr11 | 126351777 | 126354378 | FALSE | LOW_COUNTS_INDEP_FILTER | 0.5 | 0.754 | 0.2516 | NA | NA | NA | 0.0 | 3.0 | 0.0 | 0.0 | 0.0 | 0.0 |
J008 | chr11 | 126354915 | 126355441 | FALSE | LOW_COUNTS_INDEP_FILTER | 0.2 | 0.532 | 0.6745 | NA | NA | NA | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 1.0 |
N009 | chr11 | 126338399 | 126343306 | TRUE | OK | 386.2 | 0.0176 | 4.092e-51 | 9.994e-47 | -30.805 | -6.044 | 479.0 | 400.0 | 372.0 | 368.0 | 401.0 | 314.0 |
N010 | chr11 | 126343417 | 126345346 | TRUE | OK | 374.0 | 1.11 | 0.008861 | 0.2713 | -3.527 | -1.706 | 433.0 | 369.0 | 326.0 | 353.0 | 444.0 | 331.0 |
Color Codes | |||||
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NO TEST | p > 0.05 | p < 0.05 | p < 0.005 | p < 5e-04 | p < 5e-05 |
Gene ENSG00000280832.1 | |||||||
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expr | exprTX | normCt | normCtTX | rExpr | rExprTX | rawCt | rawCtTX |
PLOT | PLOT | PLOT | PLOT | PLOT | PLOT | PLOT | PLOT |
TABLE | TABLE | TABLE | TABLE | TABLE | TABLE | TABLE | TABLE |