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Normalized Counts Table (ENSG00000246334.2)

binID	chr	start	end	testable	status	baseMean	dispersion	pvalue	padjust	log2FC (mutant/control)	log2FCvst (mutant/control)	Normalized Coverage Counts
												MCF10A-parental-DMSO-1	MCF10A-parental-DMSO-2	MCF10A-parental-DMSO-3	MCF10A-KI-DMSO-7	MCF10A-KI-DMSO-8	MCF10A-KI-DMSO-9
E001	chr5	177438502	177438870	TRUE	OK	14.6	0.016	0.3649	0.7967	0.322	0.161	15.4	8.9	7.8	22.7	16.8	16.1
E002	chr5	177439913	177440031	TRUE	OK	13.1	0.0664	0.3086	0.7748	0.605	0.303	6.0	6.9	13.3	21.7	10.5	20.2
E003	chr5	177442802	177442960	TRUE	OK	28.1	0.00811	0.113	0.6516	-0.448	-0.224	30.7	27.7	23.3	27.7	21.0	38.3
E004	chr5	177443066	177443302	TRUE	OK	28.9	0.00807	0.7902	0.9449	-0.093	-0.047	34.1	24.7	15.5	33.6	26.2	39.3
E005	chr5	177443302	177443486	TRUE	OK	23.6	0.00804	0.7073	0.9196	-0.126	-0.063	26.4	22.8	12.2	23.7	23.0	33.3
E006	chr5	177443486	177443502	TRUE	OK	14.7	0.0152	0.891	0.9735	0.064	0.032	11.1	12.9	12.2	10.9	17.8	23.2
E007	chr5	177444395	177444477	TRUE	OK	21.9	0.0374	0.9017	0.9763	0.000	0.000	21.3	26.7	6.7	24.7	19.9	32.3
E008	chr5	177444477	177444580	TRUE	OK	24.1	0.0102	0.8731	0.9685	-0.064	-0.032	25.6	24.7	11.1	20.8	28.3	34.3
E009	chr5	177444580	177444594	TRUE	OK	15.5	0.0287	0.7585	0.9354	-0.126	-0.063	19.6	11.9	8.9	10.9	13.6	28.2
E010	chr5	177445978	177446344	TRUE	OK	40.8	0.0521	0.6223	0.8912	-0.168	-0.084	46.1	32.7	28.8	22.7	62.9	51.4
E011	chr5	177447643	177447698	TRUE	OK	43.3	0.0185	0.2236	0.7372	-0.386	-0.193	51.2	29.7	41.0	50.4	42.9	44.4
E012	chr5	177447698	177447699	TRUE	OK	39.8	0.0249	0.4288	0.8216	-0.288	-0.144	47.8	24.7	36.6	49.4	38.8	41.4
J013	chr5	177438870	177439913	FALSE	LOW_COUNTS_INDEP_FILTER	1.2	0.098	0.5017	NA	NA	NA	1.7	0.0	2.2	2.0	0.0	1.0
J014	chr5	177440031	177444395	FALSE	LOW_COUNTS_INDEP_FILTER	1.2	0.0764	0.4673	NA	NA	NA	0.9	0.0	1.1	1.0	1.0	3.0
J015	chr5	177442960	177443302	FALSE	ALL_ZERO	0.0	NA	NA	NA	NA	NA	0.0	0.0	0.0	0.0	0.0	0.0
J016	chr5	177443486	177444395	FALSE	ALL_ZERO	0.0	NA	NA	NA	NA	NA	0.0	0.0	0.0	0.0	0.0	0.0
J017	chr5	177443502	177444395	FALSE	ALL_ZERO	0.0	NA	NA	NA	NA	NA	0.0	0.0	0.0	0.0	0.0	0.0
J018	chr5	177444594	177447643	FALSE	LOW_COUNTS_INDEP_FILTER	2.8	0.0651	0.04721	NA	NA	NA	2.6	0.0	0.0	3.0	3.1	8.1
J019	chr5	177446344	177447643	TRUE	OK	6.7	0.0195	0.01689	0.3629	-1.287	-0.644	13.6	6.9	4.4	4.9	6.3	4.0
N020	chr5	177436530	177440699	TRUE	OK	332.7	3.32	0.4878	0.8431	-28.179	-4.586	447.8	363.3	427.9	258.9	276.5	221.9
N021	chr5	177440837	177440918	TRUE	OK	280.6	2.37	0.04808	0.5267	-28.618	-5.447	373.6	321.7	345.9	176.9	278.6	186.6
N022	chr5	177441053	177441734	TRUE	OK	77.2	0.0303	6.543e-08	3.416e-05	-1.823	-0.910	101.5	89.1	86.5	50.4	76.5	59.5
N023	chr5	177441053	177441736	TRUE	OK	166.3	0.0475	3.682e-36	3.948e-32	-30.860	-6.680	222.6	190.0	211.7	131.4	127.8	114.0
N024	chr5	177446960	177454828	TRUE	OK	115.5	0.126	0.3523	0.7921	-0.443	-0.221	92.1	118.8	99.8	113.7	148.7	120.0

Color Codes
NO TEST	p > 0.05	p < 0.05	p < 0.005	p < 5e-04	p < 5e-05

Gene ENSG00000246334.2
expr	exprTX	normCt	normCtTX	rExpr	rExprTX	rawCt	rawCtTX
PLOT	PLOT	PLOT	PLOT	PLOT	PLOT	PLOT	PLOT
TABLE	TABLE	TABLE	TABLE	TABLE	TABLE	TABLE	TABLE