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binID | chr | start | end | testable | status | baseMean | dispersion | pvalue | padjust | log2FC (mutant/control) | log2FCvst (mutant/control) | Normalized Coverage Counts | |||||
MCF10A-parental-DMSO-1 | MCF10A-parental-DMSO-2 | MCF10A-parental-DMSO-3 | MCF10A-KI-DMSO-7 | MCF10A-KI-DMSO-8 | MCF10A-KI-DMSO-9 | ||||||||||||
E001 | chr6 | 30070265 | 30071200 | TRUE | OK | 371.2 | 0.00269 | 4.473e-23 | 2.234e-19 | 1.433 | 0.713 | 411.1 | 396.9 | 434.5 | 315.3 | 343.6 | 325.8 |
E002 | chr6 | 30071200 | 30071398 | TRUE | OK | 54.3 | 0.00899 | 0.006923 | 0.2399 | -0.640 | -0.320 | 75.9 | 78.2 | 79.8 | 16.8 | 34.6 | 40.3 |
E003 | chr6 | 30071398 | 30071691 | TRUE | OK | 84.8 | 0.00441 | 1.61e-09 | 1.276e-06 | -1.159 | -0.579 | 122.8 | 124.7 | 146.3 | 30.6 | 34.6 | 49.4 |
E004 | chr6 | 30073156 | 30073248 | TRUE | OK | 46.7 | 0.00519 | 2.095e-07 | 9.419e-05 | -1.249 | -0.624 | 66.5 | 71.3 | 84.2 | 13.8 | 19.9 | 24.2 |
E005 | chr6 | 30073455 | 30073478 | TRUE | OK | 37.4 | 0.00514 | 1.941e-05 | 0.004177 | -1.097 | -0.548 | 52.0 | 57.4 | 65.4 | 14.8 | 16.8 | 18.2 |
E006 | chr6 | 30075222 | 30075849 | TRUE | OK | 109.2 | 0.00254 | 1.075e-16 | 2.883e-13 | -1.378 | -0.689 | 167.2 | 163.3 | 187.3 | 43.5 | 48.2 | 45.4 |
E007 | chr6 | 30075849 | 30075887 | TRUE | OK | 10.5 | 0.0198 | 0.663 | 0.9054 | -0.205 | -0.103 | 16.2 | 7.9 | 17.7 | 7.9 | 5.2 | 8.1 |
J008 | chr6 | 30071200 | 30071398 | FALSE | LOW_COUNTS_INDEP_FILTER | 1.0 | 0.104 | 0.5238 | NA | NA | NA | 0.9 | 0.0 | 2.2 | 2.0 | 0.0 | 1.0 |
J009 | chr6 | 30071691 | 30073156 | TRUE | OK | 26.5 | 0.0103 | 2.734e-06 | 0.0008418 | -1.550 | -0.775 | 44.4 | 39.6 | 47.7 | 4.0 | 7.3 | 16.1 |
J010 | chr6 | 30073248 | 30073455 | TRUE | OK | 25.1 | 0.00617 | 8.928e-07 | 0.0003255 | -1.575 | -0.787 | 34.1 | 42.6 | 48.8 | 7.9 | 9.4 | 8.1 |
J011 | chr6 | 30073478 | 30075222 | TRUE | OK | 17.2 | 0.0221 | 0.0007849 | 0.06683 | -1.459 | -0.729 | 19.6 | 28.7 | 36.6 | 7.9 | 7.3 | 3.0 |
Color Codes | |||||
---|---|---|---|---|---|
NO TEST | p > 0.05 | p < 0.05 | p < 0.005 | p < 5e-04 | p < 5e-05 |
Gene ENSG00000204618.8 | |||||||
---|---|---|---|---|---|---|---|
expr | exprTX | normCt | normCtTX | rExpr | rExprTX | rawCt | rawCtTX |
PLOT | PLOT | PLOT | PLOT | PLOT | PLOT | PLOT | PLOT |
TABLE | TABLE | TABLE | TABLE | TABLE | TABLE | TABLE | TABLE |