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Normalized Counts Table (ENSG00000151503.12)

binID	chr	start	end	testable	status	baseMean	dispersion	pvalue	padjust	log2FC (mutant/control)	log2FCvst (mutant/control)	Normalized Coverage Counts
												MCF10A-parental-DMSO-1	MCF10A-parental-DMSO-2	MCF10A-parental-DMSO-3	MCF10A-KI-DMSO-7	MCF10A-KI-DMSO-8	MCF10A-KI-DMSO-9
E001	chr11	134150118	134150583	TRUE	OK	226.7	0.0026	5.601e-23	2.767e-19	-1.189	-0.594	356.5	312.8	302.6	143.3	103.7	141.2
E002	chr11	134152433	134152444	TRUE	OK	13.6	0.017	0.6668	0.9067	0.156	0.078	14.5	13.9	12.2	10.9	17.8	12.1
E003	chr11	134152444	134152846	TRUE	OK	753.9	0.0381	0.1629	0.6981	0.477	0.239	663.6	704.7	674.0	686.9	1081.0	713.2
E004	chr11	134152846	134153052	TRUE	OK	1016.9	0.0259	0.2763	0.7611	0.290	0.145	1048.3	967.0	930.1	980.4	1249.7	926.0
E005	chr11	134153139	134153200	TRUE	OK	738.5	0.0161	0.5131	0.8527	0.126	0.063	841.0	710.7	697.3	734.3	790.9	656.7
E006	chr11	134153288	134153363	TRUE	OK	766.6	0.0108	0.5701	0.8733	0.087	0.043	848.7	756.2	759.4	755.0	775.2	705.1
E007	chr11	134153363	134154049	TRUE	OK	231.2	0.00872	0.6815	0.9115	-0.083	-0.041	260.2	237.6	253.9	194.7	221.0	219.9
E008	chr11	134156874	134157017	TRUE	OK	82.1	0.00529	0.003569	0.1679	-0.522	-0.261	115.2	101.0	86.5	77.1	47.1	65.6
E009	chr11	134157017	134157095	TRUE	OK	648.4	0.00509	0.5051	0.8496	0.074	0.037	674.7	653.3	679.5	633.5	611.8	637.5
E010	chr11	134157927	134158049	TRUE	OK	683.9	0.00576	0.5907	0.8803	0.061	0.030	698.6	687.9	740.5	652.3	645.3	678.9
E011	chr11	134158049	134158067	TRUE	OK	389.4	0.00612	0.8785	0.9701	0.010	0.005	406.0	381.1	443.4	381.5	365.6	359.1
E012	chr11	134158328	134158495	TRUE	OK	724.6	0.00657	0.2636	0.7552	0.145	0.072	784.7	684.9	723.9	712.6	706.0	735.3
E013	chr11	134159889	134159891	TRUE	OK	4.0	0.0427	0.5957	0.882	-0.355	-0.178	6.0	5.9	2.2	2.0	2.1	6.1
E014	chr11	134159891	134160074	TRUE	OK	777.8	0.00766	0.3242	0.7812	0.133	0.067	864.9	721.6	777.1	772.8	760.5	769.6
E015	chr11	134161779	134161780	TRUE	OK	4.2	0.0336	0.3843	0.804	0.569	0.285	2.6	4.9	3.3	3.0	5.2	6.1
E016	chr11	134161780	134161891	TRUE	OK	478.1	0.00372	0.4446	0.8276	0.083	0.042	519.5	483.0	472.2	525.8	422.2	445.8
E017	chr11	134167995	134168195	TRUE	OK	748.9	0.00148	0.3389	0.7868	0.076	0.038	828.2	704.7	784.8	799.5	584.5	791.8
E018	chr11	134168195	134168468	TRUE	OK	7.1	0.0683	0.004514	0.1916	1.874	0.937	0.9	2.0	7.8	12.8	6.3	13.1
E019	chr11	134168468	134168472	TRUE	OK	466.1	0.00341	0.7191	0.9235	0.053	0.026	505.8	434.5	513.3	507.0	324.7	511.4
E020	chr11	134168472	134168528	TRUE	OK	568.9	0.00258	0.5898	0.88	0.065	0.032	621.0	549.3	596.4	614.7	403.3	628.4
E021	chr11	134168528	134168602	TRUE	OK	636.5	0.0012	0.9786	0.9956	0.006	0.003	695.2	658.2	659.6	645.3	480.8	679.9
E022	chr11	134168916	134169054	TRUE	OK	595.7	0.00117	0.4263	0.8207	-0.058	-0.029	636.3	648.3	637.4	584.1	456.7	611.3
E023	chr11	134176306	134176386	TRUE	OK	431.7	0.00222	0.4977	0.8467	-0.058	-0.029	467.4	459.3	466.7	417.1	305.9	474.1
E024	chr11	134177218	134177457	TRUE	OK	631.8	0.00208	0.2866	0.7653	-0.086	-0.043	708.8	653.3	692.8	639.4	429.5	666.8
E025	chr11	134177457	134178075	TRUE	OK	5.3	0.0227	0.02141	0.3983	1.360	0.680	3.4	3.0	3.3	8.9	5.2	8.1
E026	chr11	134178482	134178633	TRUE	OK	5.4	0.0325	0.5282	0.858	0.395	0.197	2.6	6.9	5.5	8.9	3.1	5.0
E027	chr11	134178633	134178741	TRUE	OK	486.9	0.00165	0.9091	0.9782	-0.002	-0.001	519.5	482.0	544.3	531.7	349.9	494.3
E028	chr11	134178821	134178914	TRUE	OK	487.1	0.00177	0.4828	0.8415	0.064	0.032	524.6	451.4	537.6	534.7	380.3	494.3
E029	chr11	134178914	134178936	TRUE	OK	360.8	0.0021	0.6906	0.9144	0.044	0.022	378.7	345.4	404.6	407.2	277.6	351.0
E030	chr11	134181076	134181184	TRUE	OK	515.2	0.00148	0.7154	0.9221	0.035	0.017	522.0	550.3	544.3	562.3	398.1	514.4
E031	chr11	134183012	134183153	TRUE	OK	19.6	0.00773	0.4169	0.8171	-0.243	-0.122	21.3	24.7	21.1	16.8	13.6	20.2
E032	chr11	134184636	134184752	TRUE	OK	459.9	0.00232	0.2226	0.7366	0.120	0.060	499.0	472.1	430.1	512.9	375.0	470.1
E033	chr11	134184902	134185000	TRUE	OK	502.2	0.00929	0.9748	0.9946	0.024	0.012	568.9	503.8	506.6	633.5	339.4	461.0
E034	chr11	134185334	134185526	TRUE	OK	796.1	0.0146	0.4876	0.8431	-0.094	-0.047	956.2	781.9	855.8	949.7	448.3	784.8
E035	chr11	134192688	134192909	TRUE	OK	987.5	0.00905	0.4424	0.8269	-0.088	-0.044	1132.7	1023.5	1054.2	1115.8	591.9	1006.7
E036	chr11	134194015	134194150	TRUE	OK	735.1	0.00628	0.2344	0.7426	-0.137	-0.069	841.0	783.9	801.5	791.6	445.2	747.4
E037	chr11	134194664	134194738	TRUE	OK	650.3	0.00441	0.2558	0.7518	-0.116	-0.058	729.3	667.1	738.3	701.7	411.7	653.6
E038	chr11	134202815	134202905	TRUE	OK	578.5	0.00622	0.175	0.707	-0.167	-0.083	668.7	587.0	671.8	634.5	352.0	556.8
E039	chr11	134203141	134203198	TRUE	OK	460.0	0.0062	0.1511	0.6891	-0.180	-0.090	543.3	474.1	522.1	483.3	271.3	466.0
E040	chr11	134203653	134203906	TRUE	OK	863.4	0.00967	0.3404	0.7872	-0.123	-0.062	1011.6	895.8	929.0	976.4	507.0	860.4
E041	chr11	134204045	134204171	TRUE	OK	748.6	0.0119	0.2055	0.7265	-0.193	-0.096	824.8	779.0	906.8	845.0	413.8	722.2
E042	chr11	134204898	134204971	TRUE	OK	551.9	0.0125	0.1211	0.6612	-0.268	-0.134	616.7	544.4	732.7	575.2	299.6	542.7
E043	chr11	134206598	134206732	TRUE	OK	582.8	0.0162	0.1922	0.7187	-0.234	-0.117	623.5	600.8	756.0	605.8	297.5	613.3
E044	chr11	134208863	134208870	TRUE	OK	307.6	0.0181	0.1894	0.7169	-0.248	-0.124	328.4	328.6	394.6	313.3	146.7	333.9
E045	chr11	134208870	134208878	TRUE	OK	308.2	0.0173	0.1987	0.7227	-0.237	-0.118	335.2	323.7	391.3	314.3	148.7	335.9
E046	chr11	134208878	134208951	TRUE	OK	437.6	0.0144	0.1615	0.697	-0.238	-0.119	501.5	457.3	531.0	450.7	220.0	465.0
E047	chr11	134209144	134209206	TRUE	OK	495.5	0.0087	0.209	0.7286	-0.171	-0.085	574.9	546.4	532.1	540.6	281.8	497.3
E048	chr11	134209312	134209477	TRUE	OK	756.5	0.0104	0.783	0.9428	-0.011	-0.005	843.6	821.5	739.4	856.8	457.8	820.1
E049	chr11	134209477	134209734	TRUE	OK	14.0	0.014	0.003132	0.1562	1.144	0.572	8.5	8.9	11.1	18.8	10.5	26.2
E050	chr11	134210269	134210454	TRUE	OK	752.0	0.0122	0.9092	0.9782	0.021	0.010	868.3	764.1	735.0	847.0	447.3	850.3
E051	chr11	134216935	134217098	TRUE	OK	504.0	0.00823	0.3919	0.8067	-0.114	-0.057	621.0	525.6	506.6	536.6	306.9	527.6
E052	chr11	134220568	134220571	FALSE	LOW_COUNTS_INDEP_FILTER	0.5	0.437	0.7649	NA	NA	NA	0.0	2.0	0.0	0.0	0.0	1.0
E053	chr11	134220571	134220685	TRUE	OK	487.2	0.0111	0.9894	0.998	0.038	0.019	568.1	488.0	468.9	593.0	300.6	504.4
E054	chr11	134220685	134220726	TRUE	OK	354.1	0.0112	0.9098	0.9784	0.066	0.033	380.4	369.2	349.2	441.8	212.6	371.2
E055	chr11	134223092	134223446	TRUE	OK	13.4	0.034	0.6401	0.8978	-0.224	-0.112	10.2	17.8	17.7	9.9	15.7	9.1
E056	chr11	134223446	134223482	TRUE	OK	7.8	0.0188	0.483	0.8415	-0.341	-0.170	6.8	10.9	10.0	6.9	7.3	5.0
E057	chr11	134223862	134223941	TRUE	OK	310.3	0.0122	0.9818	0.9963	0.039	0.020	329.2	342.5	299.3	378.5	182.3	329.8
E058	chr11	134223941	134223991	TRUE	OK	144.0	0.0169	0.6046	0.885	-0.068	-0.034	172.3	145.5	148.5	167.0	71.2	159.4
E059	chr11	134223991	134224000	TRUE	OK	50.1	0.0356	0.5892	0.8798	-0.105	-0.053	62.3	55.4	46.6	59.3	17.8	59.5
E060	chr11	134224000	134224216	TRUE	OK	32.6	0.00663	0.01401	0.3352	-0.612	-0.306	34.1	46.5	43.2	26.7	17.8	27.2
E061	chr11	134224216	134224286	TRUE	OK	20.1	0.0244	0.0457	0.5197	-0.744	-0.372	17.1	28.7	33.3	16.8	7.3	17.1
E062	chr11	134224286	134224532	TRUE	OK	29.5	0.0132	0.01988	0.3864	-0.666	-0.333	36.7	33.7	43.2	32.6	13.6	17.1
E063	chr11	134224532	134224545	TRUE	OK	3.5	0.102	0.03716	0.4866	-1.938	-0.969	8.5	2.0	6.7	3.0	1.0	0.0
E064	chr11	134225096	134225454	TRUE	OK	783.2	0.0018	0.6072	0.8861	0.050	0.025	801.8	765.1	880.2	855.9	580.3	816.0
J065	chr11	134150583	134153288	TRUE	OK	3.3	0.0293	0.7476	0.9321	0.226	0.113	4.3	3.0	2.2	2.0	3.1	5.0
J066	chr11	134153052	134153139	TRUE	OK	617.5	0.0169	0.5687	0.8728	0.113	0.056	705.4	596.9	585.3	621.6	659.9	535.6
J067	chr11	134153200	134153288	TRUE	OK	501.9	0.0153	0.6247	0.8922	0.090	0.045	574.0	493.9	476.7	502.0	528.0	436.8
J068	chr11	134153363	134157017	TRUE	OK	427.1	0.0059	0.3522	0.7921	0.119	0.060	451.2	432.5	417.9	411.1	414.8	434.8
J069	chr11	134157095	134157927	TRUE	OK	464.0	0.00496	0.7793	0.9418	0.026	0.013	477.7	473.1	507.7	438.8	432.6	453.9
J070	chr11	134158067	134158328	TRUE	OK	357.6	0.00534	0.7317	0.9271	0.036	0.018	377.9	342.5	400.2	354.8	336.3	333.9
J071	chr11	134158495	134159891	TRUE	OK	452.0	0.00985	0.2908	0.7673	0.165	0.083	519.5	414.7	422.4	442.8	455.7	456.9
J072	chr11	134160074	134161780	TRUE	OK	347.5	0.00379	0.5764	0.8754	0.059	0.029	383.8	333.6	362.5	363.7	317.4	323.8
J073	chr11	134161891	134167995	TRUE	OK	284.4	0.00364	0.1991	0.7228	0.149	0.075	316.5	271.2	269.4	309.3	261.9	278.4
J074	chr11	134168195	134168468	TRUE	OK	459.2	0.00311	0.7499	0.9328	0.046	0.023	500.7	426.6	507.7	495.1	320.5	504.4
J075	chr11	134168528	134168916	FALSE	LOW_COUNTS_INDEP_FILTER	3.1	0.0331	0.07334	NA	NA	NA	1.7	4.0	0.0	4.0	4.2	5.0
J076	chr11	134168602	134168916	TRUE	OK	400.2	0.00106	0.323	0.7807	-0.080	-0.040	436.7	436.5	426.8	378.5	318.4	404.5
J077	chr11	134169054	134176306	TRUE	OK	325.3	0.00322	0.9196	0.981	-0.002	-0.001	331.8	349.4	351.4	308.3	237.8	373.2
J078	chr11	134176386	134177218	TRUE	OK	284.5	0.0018	0.07516	0.594	-0.169	-0.084	319.9	315.7	314.8	274.7	183.3	298.6
J079	chr11	134177457	134178633	TRUE	OK	299.0	0.00121	0.9002	0.9759	-0.005	-0.003	321.6	292.0	337.0	323.2	214.7	305.6
J080	chr11	134178741	134178821	TRUE	OK	325.8	0.00121	0.8754	0.9692	0.019	0.009	352.3	313.8	361.4	358.7	240.9	327.8
J081	chr11	134178936	134181076	TRUE	OK	317.8	0.00144	0.7087	0.92	0.041	0.020	336.9	303.9	354.7	356.8	234.6	319.8
J082	chr11	134181184	134183012	TRUE	OK	9.5	0.0283	0.2524	0.7504	-0.565	-0.282	6.8	16.8	12.2	6.9	7.3	7.1
J083	chr11	134181184	134184636	TRUE	OK	310.0	0.00108	0.3615	0.7956	0.081	0.041	323.3	328.6	304.8	332.1	253.5	317.7
J084	chr11	134183153	134184636	TRUE	OK	11.2	0.0131	0.5497	0.8657	-0.237	-0.119	17.1	9.9	11.1	8.9	6.3	14.1
J085	chr11	134184752	134184902	TRUE	OK	267.5	0.00483	0.2844	0.7644	0.147	0.073	281.5	283.1	242.8	317.2	228.4	252.2
J086	chr11	134185000	134185334	TRUE	OK	349.4	0.0207	0.5824	0.8776	-0.073	-0.036	426.5	344.5	361.4	455.6	189.6	318.7
J087	chr11	134185526	134192688	TRUE	OK	453.9	0.0129	0.3468	0.7898	-0.143	-0.072	551.0	450.4	501.1	528.7	252.5	439.8
J088	chr11	134192909	134194015	TRUE	OK	475.9	0.00626	0.2172	0.7337	-0.152	-0.076	545.9	541.4	492.2	512.9	289.1	474.1
J089	chr11	134194150	134194664	TRUE	OK	482.1	0.00783	0.384	0.8039	-0.105	-0.052	547.6	485.0	545.4	531.7	283.9	499.3
J090	chr11	134194738	134202815	TRUE	OK	399.9	0.00288	0.09785	0.6323	-0.172	-0.086	449.5	401.9	485.5	426.9	274.5	361.1
J091	chr11	134202905	134203141	TRUE	OK	372.9	0.00515	0.09371	0.6258	-0.205	-0.102	445.3	387.0	425.7	389.4	220.0	370.2
J092	chr11	134203198	134203653	TRUE	OK	344.4	0.0156	0.2798	0.7626	-0.180	-0.090	415.4	363.3	374.7	389.4	174.9	349.0
J093	chr11	134203906	134204045	TRUE	OK	453.0	0.00782	0.3913	0.8064	-0.104	-0.052	519.5	477.1	485.5	528.7	275.5	431.7
J094	chr11	134204171	134204898	TRUE	OK	453.5	0.0148	0.09439	0.627	-0.324	-0.162	494.7	452.3	635.2	473.4	239.9	425.7
J095	chr11	134204971	134206598	TRUE	OK	374.7	0.0162	0.2043	0.7257	-0.235	-0.118	415.4	370.2	490.0	385.4	190.6	396.4
J096	chr11	134206732	134208863	TRUE	OK	285.6	0.0198	0.1647	0.6999	-0.278	-0.139	307.1	307.8	370.3	284.6	133.0	310.7
J097	chr11	134208951	134209144	TRUE	OK	325.8	0.0122	0.1138	0.6528	-0.261	-0.131	381.3	357.3	379.1	339.0	164.5	333.9
J098	chr11	134209206	134209312	TRUE	OK	390.1	0.00913	0.3446	0.789	-0.130	-0.065	465.7	423.6	396.9	439.8	228.4	386.3
J099	chr11	134209477	134210269	TRUE	OK	449.4	0.00972	0.6913	0.9145	0.102	0.051	494.7	464.2	419.0	508.0	283.9	526.5
J100	chr11	134210454	134216935	TRUE	OK	313.1	0.014	0.3087	0.7748	-0.177	-0.089	403.5	334.6	309.3	336.0	169.7	325.8
J101	chr11	134210454	134220571	TRUE	OK	5.3	0.121	0.9468	0.9881	0.038	0.019	6.8	2.0	7.8	4.0	1.0	10.1
J102	chr11	134217098	134220571	TRUE	OK	260.3	0.00781	0.697	0.9162	-0.062	-0.031	337.8	250.4	251.6	279.7	174.9	267.3
J103	chr11	134220726	134223862	TRUE	OK	286.2	0.0135	0.9881	0.9977	0.048	0.024	298.5	320.7	273.8	357.8	168.7	297.6
J104	chr11	134223482	134223862	TRUE	OK	7.2	0.0142	0.597	0.8824	-0.255	-0.128	6.0	8.9	10.0	6.9	6.3	5.0
J105	chr11	134224000	134224286	TRUE	OK	4.4	0.0244	0.5904	0.8802	0.332	0.166	6.0	2.0	4.4	4.0	3.1	7.1
J106	chr11	134224000	134225096	TRUE	OK	21.2	0.149	0.8162	0.9523	0.043	0.021	28.1	25.7	12.2	28.7	3.1	29.3
N107	chr11	134224761	134224799	TRUE	OK	11.4	0.0252	0.7557	0.9346	0.147	0.073	16.2	7.9	10.0	12.8	5.2	16.1
N108	chr11	134225345	134234896	TRUE	OK	445.0	0.00101	0.477	0.8392	0.061	0.030	446.1	443.4	496.6	479.3	337.3	467.0

Color Codes
NO TEST	p > 0.05	p < 0.05	p < 0.005	p < 5e-04	p < 5e-05

Gene ENSG00000151503.12
expr	exprTX	normCt	normCtTX	rExpr	rExprTX	rawCt	rawCtTX
PLOT	PLOT	PLOT	PLOT	PLOT	PLOT	PLOT	PLOT
TABLE	TABLE	TABLE	TABLE	TABLE	TABLE	TABLE	TABLE