<< | < Prev Gene | TOP | Next Gene > | >> |
binID | chr | start | end | testable | status | baseMean | dispersion | pvalue | padjust | log2FC (mutant/control) | log2FCvst (mutant/control) | Normalized Coverage Counts | |||||
MCF10A-parental-DMSO-1 | MCF10A-parental-DMSO-2 | MCF10A-parental-DMSO-3 | MCF10A-KI-DMSO-7 | MCF10A-KI-DMSO-8 | MCF10A-KI-DMSO-9 | ||||||||||||
E001 | chr2 | 229357628 | 229358651 | TRUE | OK | 2384.1 | 0.022 | 0.2465 | 0.7478 | 0.308 | 0.154 | 1273.5 | 1335.2 | 1295.9 | 3118.0 | 4355.6 | 2926.2 |
E002 | chr2 | 229366872 | 229367119 | TRUE | OK | 1085.4 | 0.0014 | 0.1135 | 0.6523 | -0.117 | -0.058 | 679.8 | 683.0 | 696.2 | 1577.3 | 1481.2 | 1395.0 |
E003 | chr2 | 229388264 | 229388396 | TRUE | OK | 1017.4 | 0.00362 | 0.06843 | 0.5796 | -0.196 | -0.098 | 662.8 | 633.5 | 697.3 | 1474.5 | 1246.6 | 1390.0 |
E004 | chr2 | 229407231 | 229407345 | TRUE | OK | 911.8 | 0.00413 | 0.328 | 0.7826 | -0.110 | -0.055 | 574.9 | 563.2 | 589.7 | 1296.6 | 1119.8 | 1326.4 |
E005 | chr2 | 229418107 | 229418230 | TRUE | OK | 944.4 | 0.00569 | 0.169 | 0.7029 | -0.179 | -0.090 | 625.2 | 580.0 | 634.1 | 1332.2 | 1121.9 | 1372.8 |
E006 | chr2 | 229447315 | 229447540 | TRUE | OK | 966.4 | 0.00514 | 0.1194 | 0.6599 | -0.195 | -0.097 | 657.6 | 598.8 | 636.3 | 1404.4 | 1158.6 | 1342.6 |
E007 | chr2 | 229477139 | 229477253 | TRUE | OK | 804.6 | 0.00759 | 0.1767 | 0.7081 | -0.201 | -0.100 | 563.0 | 508.8 | 511.0 | 1186.9 | 927.1 | 1130.8 |
E008 | chr2 | 229512782 | 229512936 | TRUE | OK | 1097.2 | 0.00887 | 0.5252 | 0.857 | -0.094 | -0.047 | 699.4 | 697.8 | 665.1 | 1690.0 | 1267.5 | 1563.5 |
E009 | chr2 | 229546946 | 229547092 | TRUE | OK | 1128.4 | 0.00901 | 0.2089 | 0.7285 | -0.196 | -0.098 | 741.2 | 721.6 | 743.8 | 1704.8 | 1265.4 | 1593.7 |
E010 | chr2 | 229580153 | 229580344 | TRUE | OK | 10.1 | 0.0533 | 0.0006135 | 0.05706 | -1.813 | -0.906 | 13.6 | 13.9 | 8.9 | 11.9 | 2.1 | 10.1 |
E011 | chr2 | 229585857 | 229586024 | TRUE | OK | 1026.0 | 0.00818 | 0.05277 | 0.5413 | -0.298 | -0.149 | 698.6 | 648.3 | 743.8 | 1452.8 | 1147.0 | 1465.6 |
E012 | chr2 | 229586693 | 229587177 | TRUE | OK | 257.5 | 0.0021 | 5.502e-20 | 2.219e-16 | -0.983 | -0.491 | 232.9 | 228.6 | 239.4 | 278.7 | 264.0 | 301.6 |
E013 | chr2 | 229588393 | 229588488 | TRUE | OK | 378.8 | 0.017 | 0.05459 | 0.5463 | 0.460 | 0.230 | 200.4 | 163.3 | 186.2 | 666.1 | 427.4 | 629.4 |
E014 | chr2 | 229591579 | 229591888 | TRUE | OK | 505.3 | 0.0177 | 0.07532 | 0.5943 | 0.433 | 0.216 | 272.1 | 240.5 | 233.9 | 877.6 | 564.6 | 843.3 |
E015 | chr2 | 229714147 | 229714555 | TRUE | OK | 355.3 | 0.0138 | 0.03008 | 0.4529 | 0.474 | 0.237 | 178.3 | 156.4 | 177.4 | 651.3 | 416.9 | 551.8 |
J016 | chr2 | 229358651 | 229366872 | TRUE | OK | 435.4 | 0.00201 | 0.937 | 0.9856 | 0.010 | 0.005 | 269.5 | 266.3 | 247.2 | 629.5 | 646.3 | 553.8 |
J017 | chr2 | 229367119 | 229388264 | TRUE | OK | 552.8 | 0.00257 | 0.03744 | 0.4879 | -0.207 | -0.103 | 364.2 | 354.3 | 376.9 | 813.4 | 683.0 | 725.3 |
J018 | chr2 | 229388396 | 229407231 | TRUE | OK | 588.0 | 0.00411 | 0.09516 | 0.6281 | -0.197 | -0.098 | 382.1 | 365.2 | 412.4 | 835.1 | 700.8 | 832.2 |
J019 | chr2 | 229407345 | 229418107 | TRUE | OK | 634.0 | 0.00351 | 0.3287 | 0.7828 | -0.106 | -0.053 | 396.6 | 390.0 | 415.7 | 898.4 | 779.4 | 924.0 |
J020 | chr2 | 229418230 | 229447315 | TRUE | OK | 455.7 | 0.00803 | 0.1293 | 0.669 | -0.239 | -0.120 | 330.1 | 284.1 | 301.5 | 647.3 | 511.2 | 659.7 |
J021 | chr2 | 229447540 | 229477139 | TRUE | OK | 446.6 | 0.00551 | 0.04122 | 0.5035 | -0.276 | -0.138 | 319.9 | 293.0 | 299.3 | 657.2 | 512.2 | 598.2 |
J022 | chr2 | 229477253 | 229512782 | TRUE | OK | 494.9 | 0.00625 | 0.5282 | 0.858 | -0.088 | -0.044 | 336.1 | 303.9 | 290.4 | 748.1 | 597.1 | 694.0 |
J023 | chr2 | 229512936 | 229546946 | TRUE | OK | 734.1 | 0.0138 | 0.5182 | 0.8544 | -0.112 | -0.056 | 462.3 | 478.1 | 453.4 | 1174.1 | 779.4 | 1057.1 |
J024 | chr2 | 229547092 | 229585857 | TRUE | OK | 504.1 | 0.00342 | 0.009386 | 0.2791 | -0.293 | -0.147 | 350.6 | 310.8 | 375.8 | 687.8 | 609.7 | 690.0 |
J025 | chr2 | 229580344 | 229585857 | TRUE | OK | 5.7 | 0.128 | 0.04236 | 0.508 | -1.609 | -0.805 | 10.2 | 6.9 | 2.2 | 6.9 | 1.0 | 7.1 |
J026 | chr2 | 229586024 | 229586693 | TRUE | OK | 152.5 | 0.00181 | 4.399e-18 | 1.391e-14 | -1.042 | -0.521 | 138.2 | 143.5 | 145.2 | 150.2 | 161.3 | 176.5 |
J027 | chr2 | 229586024 | 229588393 | TRUE | OK | 306.0 | 0.0174 | 0.165 | 0.7002 | 0.348 | 0.174 | 168.0 | 144.5 | 156.3 | 526.8 | 334.2 | 506.4 |
J028 | chr2 | 229588488 | 229591579 | TRUE | OK | 227.0 | 0.021 | 0.09585 | 0.629 | 0.455 | 0.227 | 122.8 | 106.9 | 98.7 | 393.3 | 246.2 | 394.4 |
J029 | chr2 | 229591888 | 229714147 | TRUE | OK | 188.0 | 0.0144 | 0.1504 | 0.6885 | 0.343 | 0.171 | 99.8 | 96.0 | 92.0 | 342.9 | 212.6 | 284.5 |
N030 | chr2 | 229407345 | 229447315 | TRUE | OK | 26.5 | 0.0112 | 0.7959 | 0.9466 | 0.077 | 0.039 | 20.5 | 11.9 | 13.3 | 33.6 | 34.6 | 45.4 |
N031 | chr2 | 229470822 | 229477139 | TRUE | OK | 7.8 | 0.0559 | 0.08651 | 0.6148 | 1.150 | 0.575 | 4.3 | 3.0 | 0.0 | 15.8 | 16.8 | 7.1 |
N032 | chr2 | 229512936 | 229544764 | TRUE | OK | 14.5 | 0.00949 | 0.4756 | 0.8386 | 0.269 | 0.135 | 11.1 | 7.9 | 3.3 | 23.7 | 18.9 | 22.2 |
N033 | chr2 | 229544827 | 229546946 | TRUE | OK | 13.0 | 0.0766 | 0.1562 | 0.6934 | 0.752 | 0.376 | 11.1 | 2.0 | 2.2 | 20.8 | 21.0 | 21.2 |
N034 | chr2 | 229586024 | 229586128 | TRUE | OK | 13.4 | 0.0104 | 0.4844 | 0.842 | -0.261 | -0.131 | 7.7 | 6.9 | 13.3 | 21.7 | 17.8 | 13.1 |
N035 | chr2 | 229586024 | 229586750 | TRUE | OK | 65.7 | 0.0113 | 8.015e-05 | 0.01287 | -0.915 | -0.457 | 71.6 | 48.5 | 55.4 | 80.1 | 59.7 | 78.7 |
Color Codes | |||||
---|---|---|---|---|---|
NO TEST | p > 0.05 | p < 0.05 | p < 0.005 | p < 5e-04 | p < 5e-05 |
Gene ENSG00000187957.8 | |||||||
---|---|---|---|---|---|---|---|
expr | exprTX | normCt | normCtTX | rExpr | rExprTX | rawCt | rawCtTX |
PLOT | PLOT | PLOT | PLOT | PLOT | PLOT | PLOT | PLOT |
TABLE | TABLE | TABLE | TABLE | TABLE | TABLE | TABLE | TABLE |