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Normalized Counts Table (ENSG00000134955.11)

binID	chr	start	end	testable	status	baseMean	dispersion	pvalue	padjust	log2FC (mutant/control)	log2FCvst (mutant/control)	Normalized Coverage Counts
												MCF10A-parental-DMSO-1	MCF10A-parental-DMSO-2	MCF10A-parental-DMSO-3	MCF10A-KI-DMSO-7	MCF10A-KI-DMSO-8	MCF10A-KI-DMSO-9
E001	chr11	125063066	125063301	TRUE	OK	50.2	0.00653	0.6676	0.9069	0.086	0.043	64.8	57.4	46.6	50.4	33.5	48.4
E002	chr11	125063301	125063334	TRUE	OK	119.5	0.00944	0.8075	0.9497	-0.040	-0.020	156.1	126.7	135.2	107.7	71.2	120.0
E003	chr11	125063334	125063335	TRUE	OK	118.6	0.00841	0.8513	0.9624	-0.027	-0.013	149.3	124.7	139.7	104.8	72.3	121.0
E004	chr11	125063335	125063351	TRUE	OK	138.7	0.0137	0.6964	0.916	-0.071	-0.036	178.3	138.6	172.9	122.5	79.6	140.2
E005	chr11	125063351	125063426	TRUE	OK	189.7	0.013	0.5648	0.8714	-0.108	-0.054	249.9	187.1	239.4	155.2	113.1	193.7
E006	chr11	125076756	125076838	TRUE	OK	234.7	0.0155	0.6256	0.8925	-0.097	-0.048	313.9	220.7	299.3	184.8	143.5	246.1
E007	chr11	125077229	125077323	TRUE	OK	234.6	0.0126	0.2768	0.7614	-0.205	-0.103	336.1	250.4	270.5	161.1	144.6	245.1
E008	chr11	125077449	125077528	TRUE	OK	226.4	0.0172	0.5098	0.8515	-0.133	-0.067	324.1	239.5	248.3	181.8	126.8	238.1
E009	chr11	125079111	125079247	TRUE	OK	268.9	0.0179	0.7046	0.9186	-0.067	-0.033	369.3	292.0	286.0	244.1	150.8	271.3
E010	chr11	125079683	125079760	TRUE	OK	196.5	0.0185	0.7596	0.9358	0.084	0.042	270.4	197.0	196.2	208.5	121.5	185.6
E011	chr11	125080613	125080647	TRUE	OK	204.6	0.0245	0.746	0.9315	-0.065	-0.032	289.2	210.8	220.6	223.4	116.3	167.4
E012	chr11	125080647	125080780	TRUE	OK	269.2	0.0193	0.7759	0.9407	-0.047	-0.023	362.5	288.0	292.7	278.7	156.1	237.0
E013	chr11	125081420	125081458	TRUE	OK	203.1	0.0124	0.7733	0.94	-0.047	-0.024	268.7	224.7	218.4	196.7	122.6	187.6
E014	chr11	125081753	125081906	TRUE	OK	285.8	0.00976	0.8444	0.9604	0.048	0.024	370.2	296.0	309.3	244.1	188.6	306.6
E015	chr11	125082243	125082334	TRUE	OK	261.9	0.0171	0.9776	0.9953	0.025	0.013	327.5	284.1	288.2	241.1	150.8	279.4
E016	chr11	125083138	125083424	TRUE	OK	92.5	0.00431	0.01485	0.3435	-0.413	-0.206	126.2	119.8	110.9	77.1	52.4	68.6
E017	chr11	125083814	125083847	TRUE	OK	302.5	0.0137	0.3735	0.8	-0.164	-0.082	395.8	350.4	347.0	270.8	170.7	280.4
E018	chr11	125083847	125083877	TRUE	OK	342.2	0.0134	0.6383	0.8972	-0.074	-0.037	415.4	405.8	386.9	319.2	204.3	321.8
E019	chr11	125084233	125084319	TRUE	OK	367.7	0.0135	0.641	0.8982	0.112	0.056	456.3	394.9	382.4	374.6	238.8	359.1
E020	chr11	125084824	125084873	TRUE	OK	374.7	0.0076	0.9193	0.981	-0.010	-0.005	461.5	432.5	405.7	357.8	257.7	332.9
E021	chr11	125085065	125085139	TRUE	OK	394.4	0.0105	0.8849	0.972	-0.016	-0.008	506.7	424.6	439.0	376.5	254.5	365.2
E022	chr11	125085394	125085473	TRUE	OK	363.7	0.00698	0.621	0.8908	-0.078	-0.039	489.6	380.1	414.6	333.1	249.3	315.7
E023	chr11	125085576	125085674	TRUE	OK	401.4	0.00609	0.2445	0.7471	-0.170	-0.085	537.4	413.7	500.0	334.0	269.2	354.1
E024	chr11	125085953	125086018	TRUE	OK	362.9	0.00425	0.09756	0.632	-0.216	-0.108	505.0	373.2	449.0	268.8	258.7	322.8
E025	chr11	125086018	125086203	TRUE	OK	29.8	0.0447	0.7976	0.9471	0.118	0.059	37.5	18.8	43.2	17.8	21.0	40.3
E026	chr11	125086203	125086260	TRUE	OK	363.7	0.00419	2.687e-07	0.0001165	-0.655	-0.328	530.5	431.6	508.8	218.4	210.6	282.4
E027	chr11	125086260	125086397	TRUE	OK	58.4	0.00396	0.2999	0.7714	-0.204	-0.102	81.9	60.4	70.9	39.5	45.0	52.5
E028	chr11	125086397	125088118	TRUE	OK	293.7	0.0038	0.08021	0.6029	-0.228	-0.114	424.8	331.6	320.4	214.5	209.5	261.3
E029	chr11	125088118	125089235	TRUE	OK	1699.6	0.00438	0.979	0.9957	-0.002	-0.001	2065.9	1892.5	1924.4	1304.5	1537.8	1472.7
E030	chr11	125089235	125089237	TRUE	OK	160.5	0.00197	0.9808	0.9961	-0.008	-0.004	203.9	184.1	167.4	127.5	132.0	148.3
E031	chr11	125089237	125090312	TRUE	OK	988.2	0.0102	0.4478	0.8286	0.137	0.069	1165.2	1101.7	1045.4	781.7	1017.1	818.1
J032	chr11	125063351	125076756	FALSE	LOW_COUNTS_INDEP_FILTER	1.3	0.122	0.102	NA	NA	NA	0.9	0.0	1.1	2.0	0.0	4.0
J033	chr11	125063426	125076756	TRUE	OK	175.8	0.0134	0.5424	0.8631	-0.121	-0.061	234.6	168.3	226.1	136.4	107.9	181.6
J034	chr11	125076838	125077229	TRUE	OK	163.8	0.00944	0.2612	0.7539	-0.213	-0.107	238.0	161.3	200.6	116.6	105.8	160.4
J035	chr11	125077323	125077449	TRUE	OK	147.6	0.0134	0.2674	0.757	-0.224	-0.112	213.2	161.3	167.4	93.9	92.2	157.4
J036	chr11	125077528	125079111	TRUE	OK	161.4	0.0213	0.4551	0.831	-0.163	-0.081	224.3	173.2	186.2	134.4	81.7	168.5
J037	chr11	125079247	125079683	TRUE	OK	143.1	0.0118	0.6785	0.9105	0.083	0.042	197.0	141.5	144.1	142.3	94.3	139.2
J038	chr11	125079760	125080613	TRUE	OK	154.3	0.0261	0.7402	0.9296	-0.074	-0.037	222.6	159.4	163.0	169.0	86.9	125.1
J039	chr11	125080780	125081420	TRUE	OK	163.4	0.0182	0.6424	0.8986	-0.092	-0.046	220.1	189.1	170.7	156.1	89.0	155.3
J040	chr11	125081458	125081753	TRUE	OK	165.4	0.00713	0.8343	0.9576	0.038	0.019	215.8	170.2	179.6	151.2	108.9	166.4
J041	chr11	125081906	125082243	TRUE	OK	158.8	0.0108	0.9985	1	0.012	0.006	214.1	164.3	168.5	121.6	105.8	178.5
J042	chr11	125082334	125083814	TRUE	OK	178.0	0.0194	0.8182	0.9529	-0.022	-0.011	220.9	195.0	204.0	166.0	96.4	185.6
J043	chr11	125083424	125083814	TRUE	OK	69.1	0.00303	0.002752	0.1453	-0.530	-0.265	99.8	93.0	80.9	54.4	40.9	45.4
J044	chr11	125083877	125084233	TRUE	OK	251.0	0.0163	0.8803	0.9706	0.060	0.030	308.8	277.1	268.3	248.1	149.8	254.2
J045	chr11	125083877	125084824	TRUE	OK	45.4	0.0269	0.005928	0.2213	-0.928	-0.464	52.0	81.2	63.2	32.6	24.1	19.2
J046	chr11	125084319	125084824	TRUE	OK	260.1	0.013	0.3811	0.8027	0.192	0.096	316.5	280.1	255.0	275.7	176.0	257.2
J047	chr11	125084873	125085065	TRUE	OK	300.5	0.00475	0.6807	0.9112	-0.053	-0.027	377.0	338.5	339.2	273.8	205.3	269.3
J048	chr11	125085139	125085394	TRUE	OK	249.3	0.008	0.6023	0.8843	-0.092	-0.046	344.6	252.4	287.1	230.3	168.7	212.8
J049	chr11	125085473	125085576	TRUE	OK	259.0	0.00822	0.3875	0.8051	-0.145	-0.072	351.4	273.2	307.1	234.2	164.5	223.9
J050	chr11	125085674	125085953	TRUE	OK	254.5	0.00556	0.1808	0.7111	-0.199	-0.100	348.0	256.4	323.7	189.8	173.9	235.0
J051	chr11	125086018	125086203	TRUE	OK	250.7	0.00557	4.563e-06	0.001279	-0.684	-0.342	388.1	286.1	349.2	138.4	148.7	193.7
J052	chr11	125086018	125088118	TRUE	OK	35.5	0.00469	4.434e-20	1.805e-16	2.230	1.115	19.6	13.9	14.4	61.3	49.2	54.5
J053	chr11	125086260	125088118	TRUE	OK	243.5	0.00194	1.675e-11	2.034e-08	-0.746	-0.373	354.0	298.9	354.7	145.3	140.4	167.4

Color Codes
NO TEST	p > 0.05	p < 0.05	p < 0.005	p < 5e-04	p < 5e-05

Gene ENSG00000134955.11
expr	exprTX	normCt	normCtTX	rExpr	rExprTX	rawCt	rawCtTX
PLOT	PLOT	PLOT	PLOT	PLOT	PLOT	PLOT	PLOT
TABLE	TABLE	TABLE	TABLE	TABLE	TABLE	TABLE	TABLE