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| binID | chr | start | end | testable | status | baseMean | dispersion | pvalue | padjust | log2FC (mutant/control) | log2FCvst (mutant/control) | Raw Counts | |||||
| MCF10A-parental-DMSO-1 | MCF10A-parental-DMSO-2 | MCF10A-parental-DMSO-3 | MCF10A-KI-DMSO-7 | MCF10A-KI-DMSO-8 | MCF10A-KI-DMSO-9 | ||||||||||||
| E001 | chr2 | 229357628 | 229358651 | TRUE | OK | 2384.1 | 0.022 | 0.2465 | 0.7478 | 0.308 | 0.154 | 1493.0 | 1349.0 | 1169.0 | 3155.0 | 4158.0 | 2901.0 |
| E002 | chr2 | 229366872 | 229367119 | TRUE | OK | 1085.4 | 0.0014 | 0.1135 | 0.6523 | -0.117 | -0.058 | 797.0 | 690.0 | 628.0 | 1596.0 | 1414.0 | 1383.0 |
| E003 | chr2 | 229388264 | 229388396 | TRUE | OK | 1017.4 | 0.00362 | 0.06843 | 0.5796 | -0.196 | -0.098 | 777.0 | 640.0 | 629.0 | 1492.0 | 1190.0 | 1378.0 |
| E004 | chr2 | 229407231 | 229407345 | TRUE | OK | 911.8 | 0.00413 | 0.328 | 0.7826 | -0.110 | -0.055 | 674.0 | 569.0 | 532.0 | 1312.0 | 1069.0 | 1315.0 |
| E005 | chr2 | 229418107 | 229418230 | TRUE | OK | 944.4 | 0.00569 | 0.169 | 0.7029 | -0.179 | -0.090 | 733.0 | 586.0 | 572.0 | 1348.0 | 1071.0 | 1361.0 |
| E006 | chr2 | 229447315 | 229447540 | TRUE | OK | 966.4 | 0.00514 | 0.1194 | 0.6599 | -0.195 | -0.097 | 771.0 | 605.0 | 574.0 | 1421.0 | 1106.0 | 1331.0 |
| E007 | chr2 | 229477139 | 229477253 | TRUE | OK | 804.6 | 0.00759 | 0.1767 | 0.7081 | -0.201 | -0.100 | 660.0 | 514.0 | 461.0 | 1201.0 | 885.0 | 1121.0 |
| E008 | chr2 | 229512782 | 229512936 | TRUE | OK | 1097.2 | 0.00887 | 0.5252 | 0.857 | -0.094 | -0.047 | 820.0 | 705.0 | 600.0 | 1710.0 | 1210.0 | 1550.0 |
| E009 | chr2 | 229546946 | 229547092 | TRUE | OK | 1128.4 | 0.00901 | 0.2089 | 0.7285 | -0.196 | -0.098 | 869.0 | 729.0 | 671.0 | 1725.0 | 1208.0 | 1580.0 |
| E010 | chr2 | 229580153 | 229580344 | TRUE | OK | 10.1 | 0.0533 | 0.0006135 | 0.05706 | -1.813 | -0.906 | 16.0 | 14.0 | 8.0 | 12.0 | 2.0 | 10.0 |
| E011 | chr2 | 229585857 | 229586024 | TRUE | OK | 1026.0 | 0.00818 | 0.05277 | 0.5413 | -0.298 | -0.149 | 819.0 | 655.0 | 671.0 | 1470.0 | 1095.0 | 1453.0 |
| E012 | chr2 | 229586693 | 229587177 | TRUE | OK | 257.5 | 0.0021 | 5.502e-20 | 2.219e-16 | -0.983 | -0.491 | 273.0 | 231.0 | 216.0 | 282.0 | 252.0 | 299.0 |
| E013 | chr2 | 229588393 | 229588488 | TRUE | OK | 378.8 | 0.017 | 0.05459 | 0.5463 | 0.460 | 0.230 | 235.0 | 165.0 | 168.0 | 674.0 | 408.0 | 624.0 |
| E014 | chr2 | 229591579 | 229591888 | TRUE | OK | 505.3 | 0.0177 | 0.07532 | 0.5943 | 0.433 | 0.216 | 319.0 | 243.0 | 211.0 | 888.0 | 539.0 | 836.0 |
| E015 | chr2 | 229714147 | 229714555 | TRUE | OK | 355.3 | 0.0138 | 0.03008 | 0.4529 | 0.474 | 0.237 | 209.0 | 158.0 | 160.0 | 659.0 | 398.0 | 547.0 |
| J016 | chr2 | 229358651 | 229366872 | TRUE | OK | 435.4 | 0.00201 | 0.937 | 0.9856 | 0.010 | 0.005 | 316.0 | 269.0 | 223.0 | 637.0 | 617.0 | 549.0 |
| J017 | chr2 | 229367119 | 229388264 | TRUE | OK | 552.8 | 0.00257 | 0.03744 | 0.4879 | -0.207 | -0.103 | 427.0 | 358.0 | 340.0 | 823.0 | 652.0 | 719.0 |
| J018 | chr2 | 229388396 | 229407231 | TRUE | OK | 588.0 | 0.00411 | 0.09516 | 0.6281 | -0.197 | -0.098 | 448.0 | 369.0 | 372.0 | 845.0 | 669.0 | 825.0 |
| J019 | chr2 | 229407345 | 229418107 | TRUE | OK | 634.0 | 0.00351 | 0.3287 | 0.7828 | -0.106 | -0.053 | 465.0 | 394.0 | 375.0 | 909.0 | 744.0 | 916.0 |
| J020 | chr2 | 229418230 | 229447315 | TRUE | OK | 455.7 | 0.00803 | 0.1293 | 0.669 | -0.239 | -0.120 | 387.0 | 287.0 | 272.0 | 655.0 | 488.0 | 654.0 |
| J021 | chr2 | 229447540 | 229477139 | TRUE | OK | 446.6 | 0.00551 | 0.04122 | 0.5035 | -0.276 | -0.138 | 375.0 | 296.0 | 270.0 | 665.0 | 489.0 | 593.0 |
| J022 | chr2 | 229477253 | 229512782 | TRUE | OK | 494.9 | 0.00625 | 0.5282 | 0.858 | -0.088 | -0.044 | 394.0 | 307.0 | 262.0 | 757.0 | 570.0 | 688.0 |
| J023 | chr2 | 229512936 | 229546946 | TRUE | OK | 734.1 | 0.0138 | 0.5182 | 0.8544 | -0.112 | -0.056 | 542.0 | 483.0 | 409.0 | 1188.0 | 744.0 | 1048.0 |
| J024 | chr2 | 229547092 | 229585857 | TRUE | OK | 504.1 | 0.00342 | 0.009386 | 0.2791 | -0.293 | -0.147 | 411.0 | 314.0 | 339.0 | 696.0 | 582.0 | 684.0 |
| J025 | chr2 | 229580344 | 229585857 | TRUE | OK | 5.7 | 0.128 | 0.04236 | 0.508 | -1.609 | -0.805 | 12.0 | 7.0 | 2.0 | 7.0 | 1.0 | 7.0 |
| J026 | chr2 | 229586024 | 229586693 | TRUE | OK | 152.5 | 0.00181 | 4.399e-18 | 1.391e-14 | -1.042 | -0.521 | 162.0 | 145.0 | 131.0 | 152.0 | 154.0 | 175.0 |
| J027 | chr2 | 229586024 | 229588393 | TRUE | OK | 306.0 | 0.0174 | 0.165 | 0.7002 | 0.348 | 0.174 | 197.0 | 146.0 | 141.0 | 533.0 | 319.0 | 502.0 |
| J028 | chr2 | 229588488 | 229591579 | TRUE | OK | 227.0 | 0.021 | 0.09585 | 0.629 | 0.455 | 0.227 | 144.0 | 108.0 | 89.0 | 398.0 | 235.0 | 391.0 |
| J029 | chr2 | 229591888 | 229714147 | TRUE | OK | 188.0 | 0.0144 | 0.1504 | 0.6885 | 0.343 | 0.171 | 117.0 | 97.0 | 83.0 | 347.0 | 203.0 | 282.0 |
| N030 | chr2 | 229407345 | 229447315 | TRUE | OK | 26.5 | 0.0112 | 0.7959 | 0.9466 | 0.077 | 0.039 | 24.0 | 12.0 | 12.0 | 34.0 | 33.0 | 45.0 |
| N031 | chr2 | 229470822 | 229477139 | TRUE | OK | 7.8 | 0.0559 | 0.08651 | 0.6148 | 1.150 | 0.575 | 5.0 | 3.0 | 0.0 | 16.0 | 16.0 | 7.0 |
| N032 | chr2 | 229512936 | 229544764 | TRUE | OK | 14.5 | 0.00949 | 0.4756 | 0.8386 | 0.269 | 0.135 | 13.0 | 8.0 | 3.0 | 24.0 | 18.0 | 22.0 |
| N033 | chr2 | 229544827 | 229546946 | TRUE | OK | 13.0 | 0.0766 | 0.1562 | 0.6934 | 0.752 | 0.376 | 13.0 | 2.0 | 2.0 | 21.0 | 20.0 | 21.0 |
| N034 | chr2 | 229586024 | 229586128 | TRUE | OK | 13.4 | 0.0104 | 0.4844 | 0.842 | -0.261 | -0.131 | 9.0 | 7.0 | 12.0 | 22.0 | 17.0 | 13.0 |
| N035 | chr2 | 229586024 | 229586750 | TRUE | OK | 65.7 | 0.0113 | 8.015e-05 | 0.01287 | -0.915 | -0.457 | 84.0 | 49.0 | 50.0 | 81.0 | 57.0 | 78.0 |
| Color Codes | |||||
|---|---|---|---|---|---|
| NO TEST | p > 0.05 | p < 0.05 | p < 0.005 | p < 5e-04 | p < 5e-05 |
| Gene ENSG00000187957.8 | |||||||
|---|---|---|---|---|---|---|---|
| expr | exprTX | normCt | normCtTX | rExpr | rExprTX | rawCt | rawCtTX |
| PLOT | PLOT | PLOT | PLOT | PLOT | PLOT | PLOT | PLOT |
| TABLE | TABLE | TABLE | TABLE | TABLE | TABLE | TABLE | TABLE |