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Normalized Counts Table (ENSG00000176890.16)

binID	chr	start	end	testable	status	baseMean	dispersion	pvalue	padjust	log2FC (mutant/control)	log2FCvst (mutant/control)	Normalized Coverage Counts
												MCF10A-parental-DMSO-1	MCF10A-parental-DMSO-2	MCF10A-parental-DMSO-3	MCF10A-KI-DMSO-7	MCF10A-KI-DMSO-8	MCF10A-KI-DMSO-9
E001	chr18	657652	657664	TRUE	OK	240.7	0.0112	0.2827	0.7638	-0.213	-0.107	264.4	219.7	208.4	277.7	221.0	253.2
E002	chr18	657664	657742	TRUE	OK	1209.8	0.00913	0.2045	0.7258	-0.207	-0.104	1184.8	1100.7	1169.5	1404.4	1134.5	1264.9
E003	chr18	657742	657947	TRUE	OK	2486.8	0.00829	0.3674	0.7978	-0.143	-0.072	2292.8	2250.8	2369.0	2831.4	2452.3	2724.5
E004	chr18	658263	658748	TRUE	OK	15.7	0.0705	0.2363	0.7434	-0.618	-0.309	11.9	24.7	15.5	21.7	6.3	14.1
E005	chr18	659640	659689	TRUE	OK	2111.8	0.00676	0.8003	0.9478	-0.039	-0.019	1885.9	1862.8	1947.7	2473.7	2171.5	2329.1
E006	chr18	659689	659714	TRUE	OK	2132.9	0.00535	0.9153	0.9799	-0.018	-0.009	1845.8	1905.4	1964.3	2477.6	2252.2	2352.3
E007	chr18	662145	662320	TRUE	OK	3432.8	0.00538	0.7273	0.9259	-0.051	-0.025	3017.8	3003.1	3251.4	3861.2	3675.8	3787.7
E008	chr18	667720	667752	TRUE	OK	199.4	0.00452	1.062e-16	2.865e-13	-1.181	-0.590	278.1	238.5	249.4	132.4	141.4	156.3
E009	chr18	669071	669173	TRUE	OK	2971.4	0.00376	0.3626	0.7961	-0.101	-0.051	2761.9	2548.7	2835.7	3257.4	3247.3	3177.4
E010	chr18	669173	669464	TRUE	OK	115.8	0.0214	0.05969	0.5591	-0.526	-0.263	156.1	118.8	95.3	123.5	91.1	109.9
E011	chr18	670691	670867	TRUE	OK	3069.1	0.00303	0.3969	0.8087	-0.085	-0.042	2854.0	2611.1	2907.7	3379.9	3458.9	3202.6
E012	chr18	671379	671451	TRUE	OK	2452.1	0.00254	0.7756	0.9406	-0.025	-0.013	2183.6	2039.0	2362.3	2680.2	2985.4	2462.2
E013	chr18	672859	672997	TRUE	OK	2424.6	0.00112	0.1463	0.6852	0.094	0.047	2095.8	2078.6	2101.8	2617.0	3118.5	2535.9
E014	chr18	672997	673363	TRUE	OK	3842.1	0.00982	0.1557	0.6931	0.256	0.128	3196.9	3325.7	3050.7	4004.5	5546.6	3927.9
E015	chr18	673363	673484	TRUE	OK	949.0	0.013	0.1546	0.6922	0.295	0.148	820.6	804.7	641.8	1034.7	1464.4	928.0
E016	chr18	673484	673578	TRUE	OK	198.8	0.0139	0.8748	0.969	-0.008	-0.004	201.3	159.4	169.6	196.7	298.5	167.4
J017	chr18	657947	659640	TRUE	OK	1558.6	0.00849	0.568	0.8726	-0.091	-0.045	1438.1	1414.4	1426.7	1813.5	1523.1	1736.0
J018	chr18	657947	669071	FALSE	LOW_COUNTS_INDEP_FILTER	2.2	0.039	0.2787	NA	NA	NA	1.7	3.0	3.3	1.0	2.1	2.0
J019	chr18	658748	659640	FALSE	LOW_COUNTS_INDEP_FILTER	0.2	0.537	0.4837	NA	NA	NA	0.0	1.0	0.0	0.0	0.0	0.0
J020	chr18	659714	662145	TRUE	OK	1832.2	0.00534	0.6338	0.8955	-0.063	-0.032	1613.8	1653.0	1716.0	2122.8	1900.2	1987.1
J021	chr18	662320	669071	TRUE	OK	1807.1	0.00395	0.6973	0.9163	0.037	0.018	1566.9	1477.8	1714.9	2055.6	2002.9	2024.5
J022	chr18	662320	670691	TRUE	OK	13.1	0.0141	0.001196	0.08776	-1.257	-0.628	22.2	16.8	12.2	9.9	11.5	6.1
J023	chr18	667752	669071	TRUE	OK	124.2	0.00416	3.719e-18	1.22e-14	-1.340	-0.670	172.3	158.4	166.3	80.1	73.3	94.8
J024	chr18	669173	670691	TRUE	OK	1722.3	0.00262	0.1997	0.723	-0.120	-0.060	1644.5	1491.6	1634.0	1865.9	1880.3	1817.7
J025	chr18	670867	671379	TRUE	OK	1725.4	0.00216	0.3144	0.777	-0.084	-0.042	1572.0	1461.9	1691.6	1883.7	2041.6	1701.7
J026	chr18	671451	672859	TRUE	OK	1407.7	0.00177	0.215	0.7326	0.098	0.049	1219.7	1132.3	1274.8	1585.2	1795.5	1438.4
N027	chr18	657659	657687	TRUE	OK	55.2	1.01	0.5404	0.8623	0.293	0.146	80.2	50.5	0.0	75.1	61.8	63.5
N028	chr18	673076	674160	TRUE	OK	33.4	0.0143	0.1452	0.6843	-0.405	-0.202	35.0	34.6	33.3	20.8	34.6	42.4

Color Codes
NO TEST	p > 0.05	p < 0.05	p < 0.005	p < 5e-04	p < 5e-05

Gene ENSG00000176890.16
expr	exprTX	normCt	normCtTX	rExpr	rExprTX	rawCt	rawCtTX
PLOT	PLOT	PLOT	PLOT	PLOT	PLOT	PLOT	PLOT
TABLE	TABLE	TABLE	TABLE	TABLE	TABLE	TABLE	TABLE