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binID | chr | start | end | testable | status | baseMean | dispersion | pvalue | padjust | log2FC (mutant/control) | log2FCvst (mutant/control) | Normalized Coverage Counts | |||||
MCF10A-parental-DMSO-1 | MCF10A-parental-DMSO-2 | MCF10A-parental-DMSO-3 | MCF10A-KI-DMSO-7 | MCF10A-KI-DMSO-8 | MCF10A-KI-DMSO-9 | ||||||||||||
E001 | chr10 | 125836336 | 125836339 | TRUE | OK | 994.0 | 0.0158 | 4.401e-06 | 0.001243 | 1.010 | 0.505 | 836.8 | 842.3 | 737.2 | 1005.1 | 1536.7 | 1005.7 |
E002 | chr10 | 125836339 | 125836855 | TRUE | OK | 2079.3 | 0.0167 | 0.003749 | 0.1729 | 0.654 | 0.327 | 1953.3 | 2002.4 | 1972.1 | 1896.5 | 2757.1 | 1894.3 |
E003 | chr10 | 125838205 | 125838387 | TRUE | OK | 829.5 | 0.00113 | 0.7639 | 0.9372 | -0.021 | -0.011 | 928.0 | 893.8 | 947.8 | 748.1 | 775.2 | 683.9 |
E004 | chr10 | 125839000 | 125839188 | TRUE | OK | 808.2 | 0.0019 | 0.01521 | 0.3471 | -0.207 | -0.104 | 961.3 | 922.5 | 950.0 | 713.5 | 666.2 | 635.5 |
E005 | chr10 | 125840846 | 125840996 | TRUE | OK | 733.7 | 0.00193 | 2.003e-07 | 9.058e-05 | -0.454 | -0.227 | 938.3 | 836.4 | 961.1 | 549.5 | 584.5 | 532.6 |
E006 | chr10 | 125841742 | 125841934 | TRUE | OK | 1021.5 | 0.00249 | 0.2201 | 0.7353 | -0.116 | -0.058 | 1220.6 | 1072.9 | 1200.6 | 885.5 | 872.6 | 876.6 |
E007 | chr10 | 125852292 | 125852451 | TRUE | OK | 878.8 | 0.00228 | 0.001934 | 0.1186 | -0.282 | -0.141 | 1056.8 | 983.9 | 1097.5 | 743.2 | 696.6 | 695.0 |
E008 | chr10 | 125852542 | 125852642 | TRUE | OK | 803.6 | 0.0054 | 0.03238 | 0.4642 | -0.279 | -0.140 | 961.3 | 887.9 | 1021.0 | 717.5 | 601.3 | 632.5 |
E009 | chr10 | 125853960 | 125854203 | TRUE | OK | 917.4 | 0.00452 | 0.007185 | 0.2447 | -0.322 | -0.161 | 1103.7 | 1066.0 | 1136.3 | 791.6 | 669.4 | 737.4 |
E010 | chr10 | 125854203 | 125854859 | TRUE | OK | 14.4 | 0.0213 | 0.4678 | 0.836 | -0.296 | -0.148 | 21.3 | 11.9 | 18.8 | 11.9 | 7.3 | 15.1 |
E011 | chr10 | 125859602 | 125859975 | TRUE | OK | 995.4 | 0.00441 | 0.01902 | 0.3804 | -0.277 | -0.138 | 1182.2 | 1171.9 | 1190.6 | 834.1 | 737.5 | 856.4 |
E012 | chr10 | 125866989 | 125867128 | TRUE | OK | 710.3 | 0.00463 | 0.02283 | 0.4086 | -0.280 | -0.140 | 876.0 | 828.5 | 834.7 | 603.8 | 518.5 | 600.2 |
E013 | chr10 | 125867128 | 125867183 | TRUE | OK | 503.6 | 0.00501 | 0.006383 | 0.2299 | -0.356 | -0.178 | 647.4 | 594.9 | 597.5 | 414.1 | 352.0 | 415.6 |
E014 | chr10 | 125880542 | 125881071 | TRUE | OK | 1220.4 | 0.0129 | 0.03894 | 0.4945 | -0.391 | -0.195 | 1518.3 | 1503.5 | 1427.8 | 1058.5 | 782.5 | 1031.9 |
E015 | chr10 | 125881071 | 125881315 | TRUE | OK | 23.2 | 0.0162 | 0.3603 | 0.7952 | -0.292 | -0.146 | 30.7 | 26.7 | 26.6 | 26.7 | 12.6 | 16.1 |
E016 | chr10 | 125896217 | 125896436 | TRUE | OK | 514.3 | 0.0101 | 0.1803 | 0.7106 | -0.231 | -0.115 | 620.1 | 630.5 | 568.7 | 451.6 | 348.8 | 466.0 |
J017 | chr10 | 125836855 | 125838205 | TRUE | OK | 434.1 | 0.00151 | 0.3958 | 0.8083 | -0.073 | -0.037 | 489.6 | 460.3 | 522.1 | 367.6 | 420.1 | 345.0 |
J018 | chr10 | 125838387 | 125839000 | TRUE | OK | 447.8 | 0.00273 | 0.8065 | 0.9494 | -0.025 | -0.012 | 513.5 | 487.0 | 496.6 | 436.8 | 393.9 | 359.1 |
J019 | chr10 | 125839188 | 125840846 | TRUE | OK | 392.7 | 0.00118 | 2.176e-06 | 0.0006938 | -0.403 | -0.201 | 482.8 | 460.3 | 512.1 | 313.3 | 297.5 | 290.5 |
J020 | chr10 | 125840996 | 125841742 | TRUE | OK | 414.0 | 0.00292 | 2.497e-06 | 0.0007774 | -0.515 | -0.258 | 555.3 | 466.2 | 553.2 | 284.6 | 334.2 | 290.5 |
J021 | chr10 | 125841934 | 125852292 | TRUE | OK | 383.2 | 0.0012 | 0.0007577 | 0.06535 | -0.288 | -0.144 | 464.9 | 431.6 | 482.2 | 315.3 | 302.7 | 302.6 |
J022 | chr10 | 125852451 | 125852542 | TRUE | OK | 589.7 | 0.00337 | 0.01251 | 0.3184 | -0.275 | -0.137 | 712.2 | 655.2 | 741.6 | 516.9 | 450.4 | 462.0 |
J023 | chr10 | 125852642 | 125853960 | TRUE | OK | 525.1 | 0.00489 | 0.01654 | 0.3598 | -0.307 | -0.153 | 633.8 | 593.9 | 667.3 | 472.4 | 388.6 | 394.4 |
J024 | chr10 | 125854203 | 125859602 | TRUE | OK | 339.4 | 0.00332 | 0.005992 | 0.2225 | -0.322 | -0.161 | 387.2 | 413.7 | 432.3 | 273.8 | 243.0 | 286.5 |
J025 | chr10 | 125859975 | 125866989 | TRUE | OK | 421.3 | 0.00374 | 0.06821 | 0.5792 | -0.216 | -0.108 | 518.6 | 476.1 | 491.1 | 366.7 | 314.3 | 361.1 |
J026 | chr10 | 125867183 | 125880542 | TRUE | OK | 388.4 | 0.0038 | 6.331e-05 | 0.01074 | -0.483 | -0.241 | 505.0 | 474.1 | 487.8 | 281.7 | 261.9 | 319.8 |
J027 | chr10 | 125881071 | 125896217 | TRUE | OK | 224.9 | 0.0246 | 0.1559 | 0.6932 | -0.374 | -0.187 | 294.3 | 302.9 | 231.7 | 208.5 | 122.6 | 189.6 |
N028 | chr10 | 125833946 | 125841254 | TRUE | OK | 423.5 | 0.00115 | 3.872e-18 | 1.261e-14 | 0.711 | 0.355 | 351.4 | 386.0 | 378.0 | 484.3 | 472.4 | 469.0 |
N029 | chr10 | 125841330 | 125853124 | TRUE | OK | 147.6 | 0.01 | 0.0005175 | 0.05076 | 0.679 | 0.340 | 110.0 | 152.4 | 126.4 | 140.3 | 203.2 | 153.3 |
N030 | chr10 | 125881071 | 125885364 | TRUE | OK | 96.5 | 0.0347 | 0.01131 | 0.3045 | -0.823 | -0.412 | 144.2 | 141.5 | 110.9 | 83.0 | 36.7 | 62.5 |
Color Codes | |||||
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NO TEST | p > 0.05 | p < 0.05 | p < 0.005 | p < 5e-04 | p < 5e-05 |
Gene ENSG00000089876.11 | |||||||
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expr | exprTX | normCt | normCtTX | rExpr | rExprTX | rawCt | rawCtTX |
PLOT | PLOT | PLOT | PLOT | PLOT | PLOT | PLOT | PLOT |
TABLE | TABLE | TABLE | TABLE | TABLE | TABLE | TABLE | TABLE |