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binID | chr | start | end | testable | status | baseMean | dispersion | pvalue | padjust | log2FC (mutant/control) | log2FCvst (mutant/control) | Normalized Coverage Counts | |||||
MCF10A-parental-DMSO-1 | MCF10A-parental-DMSO-2 | MCF10A-parental-DMSO-3 | MCF10A-KI-DMSO-7 | MCF10A-KI-DMSO-8 | MCF10A-KI-DMSO-9 | ||||||||||||
E001 | chr20 | 62387102 | 62387122 | TRUE | OK | 2250.0 | 0.0024 | 0.7364 | 0.9285 | -0.046 | -0.023 | 2035.2 | 2147.9 | 2026.4 | 2101.1 | 3114.3 | 2074.9 |
E002 | chr20 | 62387122 | 62387136 | TRUE | OK | 9158.2 | 0.00393 | 0.1608 | 0.6966 | -0.177 | -0.088 | 8497.3 | 8878.5 | 8458.2 | 8197.8 | 12440.4 | 8477.1 |
E003 | chr20 | 62387296 | 62387317 | TRUE | OK | 150.7 | 0.00453 | 0.6086 | 0.8865 | 0.057 | 0.028 | 137.3 | 126.7 | 136.4 | 136.4 | 203.2 | 164.4 |
E004 | chr20 | 62387317 | 62387320 | TRUE | OK | 359.8 | 0.00571 | 0.5305 | 0.8589 | 0.069 | 0.034 | 307.9 | 304.9 | 340.3 | 316.3 | 488.1 | 401.5 |
E005 | chr20 | 62387320 | 62387324 | TRUE | OK | 10730.2 | 0.00422 | 0.159 | 0.6956 | -0.185 | -0.092 | 9922.6 | 10338.5 | 9907.0 | 9486.5 | 14649.6 | 10076.9 |
E006 | chr20 | 62387324 | 62387388 | TRUE | OK | 15727.6 | 0.00732 | 0.1527 | 0.6906 | -0.250 | -0.124 | 14373.4 | 15179.6 | 14216.0 | 13813.2 | 22041.0 | 14742.2 |
E007 | chr20 | 62387610 | 62387674 | TRUE | OK | 18510.8 | 0.00864 | 0.2937 | 0.7687 | -0.200 | -0.099 | 16566.4 | 17661.1 | 16543.9 | 16119.9 | 26843.9 | 17329.5 |
E008 | chr20 | 62387674 | 62387842 | TRUE | OK | 824.3 | 0.0022 | 8.771e-15 | 1.828e-11 | 0.678 | 0.339 | 517.8 | 598.8 | 590.9 | 896.4 | 1375.4 | 966.3 |
E009 | chr20 | 62387842 | 62387914 | TRUE | OK | 20122.6 | 0.00456 | 0.01168 | 0.3086 | -0.287 | -0.138 | 17739.2 | 19150.7 | 18068.1 | 17254.4 | 29754.9 | 18767.9 |
E010 | chr20 | 62387914 | 62388115 | TRUE | OK | 223.4 | 0.007 | 0.0001637 | 0.02235 | 0.579 | 0.290 | 172.3 | 173.2 | 131.9 | 257.0 | 349.9 | 256.2 |
E011 | chr20 | 62388115 | 62388308 | TRUE | OK | 208.3 | 0.00291 | 2.432e-19 | 8.986e-16 | 1.131 | 0.566 | 113.4 | 124.7 | 105.3 | 264.9 | 402.2 | 239.1 |
E012 | chr20 | 62388308 | 62388364 | TRUE | OK | 10249.4 | 0.00868 | 0.4525 | 0.83 | 0.136 | 0.068 | 9606.2 | 9198.2 | 8309.6 | 9062.6 | 15986.3 | 9333.5 |
E013 | chr20 | 62388364 | 62388456 | TRUE | OK | 1214.4 | 0.0033 | 0.0001379 | 0.01957 | 0.396 | 0.198 | 828.2 | 1065.0 | 947.8 | 1179.0 | 2093.0 | 1173.1 |
E014 | chr20 | 62388456 | 62388519 | TRUE | OK | 8240.7 | 0.00459 | 0.6108 | 0.8873 | 0.078 | 0.039 | 7639.2 | 7444.3 | 6909.5 | 7051.4 | 12842.7 | 7557.2 |
E015 | chr20 | 62388519 | 62388520 | TRUE | OK | 58.5 | 0.0219 | 0.07959 | 0.602 | -0.549 | -0.274 | 70.8 | 62.4 | 58.8 | 62.3 | 53.4 | 43.4 |
J016 | chr20 | 62387136 | 62387320 | TRUE | OK | 9155.5 | 0.00375 | 0.1519 | 0.69 | -0.177 | -0.088 | 8495.6 | 8876.6 | 8453.7 | 8194.9 | 12435.2 | 8477.1 |
J017 | chr20 | 62387388 | 62387610 | TRUE | OK | 15674.2 | 0.00707 | 0.1396 | 0.6789 | -0.252 | -0.125 | 14327.4 | 15139.0 | 14173.8 | 13762.8 | 21965.5 | 14676.6 |
J018 | chr20 | 62387674 | 62387842 | TRUE | OK | 17562.0 | 0.00504 | 0.07712 | 0.5977 | -0.231 | -0.114 | 15847.4 | 16791.0 | 15785.7 | 15179.1 | 25413.0 | 16356.1 |
J019 | chr20 | 62387914 | 62388308 | TRUE | OK | 9995.7 | 0.00895 | 0.5507 | 0.866 | 0.115 | 0.057 | 9439.0 | 8998.3 | 8104.6 | 8763.1 | 15587.2 | 9082.4 |
J020 | chr20 | 62388364 | 62388456 | TRUE | OK | 8005.4 | 0.00453 | 0.7199 | 0.9237 | 0.062 | 0.031 | 7454.1 | 7241.4 | 6743.3 | 6800.4 | 12485.4 | 7308.0 |
N021 | chr20 | 62387088 | 62387320 | TRUE | OK | 35.3 | 0.00417 | 0.68 | 0.911 | 0.091 | 0.045 | 32.4 | 28.7 | 31.0 | 25.7 | 54.5 | 39.3 |
N022 | chr20 | 62387674 | 62388308 | TRUE | OK | 46.2 | 0.00299 | 0.9626 | 0.992 | 0.008 | 0.004 | 40.9 | 39.6 | 44.3 | 37.6 | 72.3 | 42.4 |
Color Codes | |||||
---|---|---|---|---|---|
NO TEST | p > 0.05 | p < 0.05 | p < 0.005 | p < 5e-04 | p < 5e-05 |
Gene ENSG00000171858.18 | |||||||
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expr | exprTX | normCt | normCtTX | rExpr | rExprTX | rawCt | rawCtTX |
PLOT | PLOT | PLOT | PLOT | PLOT | PLOT | PLOT | PLOT |
TABLE | TABLE | TABLE | TABLE | TABLE | TABLE | TABLE | TABLE |