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Normalized Counts Table (ENSG00000167881.15)

binID	chr	start	end	testable	status	baseMean	dispersion	pvalue	padjust	log2FC (mutant/control)	log2FCvst (mutant/control)	Normalized Coverage Counts
												MCF10A-parental-DMSO-1	MCF10A-parental-DMSO-2	MCF10A-parental-DMSO-3	MCF10A-KI-DMSO-7	MCF10A-KI-DMSO-8	MCF10A-KI-DMSO-9
E001	chr17	76038774	76038784	FALSE	LOW_COUNTS_INDEP_FILTER	0.8	0.152	0.7436	NA	NA	NA	0.9	0.0	2.2	1.0	0.0	1.0
E002	chr17	76038784	76039103	TRUE	OK	184.7	0.00852	0.4335	0.8233	0.140	0.070	149.3	184.1	204.0	191.7	215.8	163.4
E003	chr17	76039103	76039105	TRUE	OK	148.7	0.0103	0.7208	0.924	0.077	0.038	126.2	148.5	167.4	154.2	176.0	120.0
E004	chr17	76039105	76039550	TRUE	OK	2281.0	0.00771	0.152	0.6901	0.219	0.110	2239.9	2151.8	2136.2	2328.4	2693.2	2136.4
E005	chr17	76039550	76039933	TRUE	OK	3123.3	0.00462	0.4134	0.8157	0.096	0.048	3263.5	2975.3	3044.1	3166.5	3345.8	2944.4
E006	chr17	76040418	76040474	TRUE	OK	1492.5	0.00216	0.1848	0.7139	-0.112	-0.056	1640.3	1442.1	1614.0	1434.0	1470.7	1353.7
E007	chr17	76040474	76040902	TRUE	OK	44.3	0.00782	0.483	0.8415	0.167	0.084	36.7	46.5	44.3	37.6	45.0	55.5
E008	chr17	76040902	76040978	TRUE	OK	1406.5	0.00218	0.1657	0.7009	-0.118	-0.059	1556.7	1369.9	1507.6	1344.1	1383.8	1277.0
E009	chr17	76040978	76041628	TRUE	OK	78.3	0.0198	0.7727	0.9398	0.077	0.039	84.4	88.1	58.8	62.3	96.4	79.7
E010	chr17	76043374	76043828	TRUE	OK	36.7	0.00691	0.9443	0.9873	0.024	0.012	35.8	36.6	38.8	37.6	26.2	45.4
E011	chr17	76043828	76043958	TRUE	OK	1566.6	0.00206	0.1631	0.6982	-0.116	-0.058	1758.0	1525.3	1649.5	1497.3	1495.9	1473.7
E012	chr17	76044753	76045291	TRUE	OK	21.8	0.00892	0.9595	0.9911	-0.010	-0.005	17.1	25.7	24.4	24.7	22.0	17.1
E013	chr17	76045291	76045386	TRUE	OK	1318.7	0.00309	0.3281	0.7826	-0.099	-0.049	1508.1	1242.2	1384.6	1322.3	1188.9	1265.9
E014	chr17	76046037	76046061	TRUE	OK	1160.0	0.00446	0.2074	0.7275	-0.146	-0.073	1346.0	1115.5	1229.4	1204.7	974.2	1090.4
E015	chr17	76046061	76046194	TRUE	OK	1984.5	0.00495	0.05705	0.5524	-0.226	-0.113	2213.5	1942.0	2274.7	2015.1	1575.5	1886.3
E016	chr17	76047905	76047970	TRUE	OK	1876.8	0.00444	0.05274	0.5412	-0.217	-0.108	2013.9	1888.5	2169.4	1922.2	1488.5	1778.3
E017	chr17	76047970	76049647	TRUE	OK	40.3	0.00653	0.0002472	0.03047	0.860	0.430	28.1	26.7	33.3	56.3	38.8	58.5
E018	chr17	76050427	76050526	TRUE	OK	1936.5	0.00251	0.05282	0.5413	-0.169	-0.084	2045.4	1933.1	2203.8	1936.0	1620.5	1880.2
E019	chr17	76053448	76053648	TRUE	OK	55.4	0.0051	5.101e-30	3.934e-26	-2.650	-1.325	86.2	100.0	102.0	20.8	11.5	12.1
E020	chr17	76053648	76053656	TRUE	OK	3.4	0.0875	0.1776	0.7086	-1.139	-0.570	1.7	6.9	5.5	4.0	1.0	1.0
E021	chr17	76057396	76057402	TRUE	OK	12.8	0.0169	0.6562	0.9029	-0.165	-0.082	10.2	16.8	14.4	16.8	8.4	10.1
E022	chr17	76057402	76057543	TRUE	OK	1779.2	0.00148	0.7383	0.929	-0.021	-0.011	1762.2	1775.7	1916.7	1847.1	1596.4	1777.3
E023	chr17	76060307	76060390	TRUE	OK	1271.6	0.00226	0.5965	0.8822	-0.041	-0.021	1286.3	1282.8	1353.5	1350.0	1102.0	1254.8
E024	chr17	76060390	76060742	TRUE	OK	23.9	0.0827	0.05454	0.546	0.946	0.473	5.1	16.8	28.8	24.7	29.3	38.3
E025	chr17	76061109	76061149	TRUE	OK	1112.5	0.00217	0.1606	0.6964	-0.116	-0.058	1164.3	1137.3	1209.4	1152.3	938.6	1073.3
E026	chr17	76061149	76061174	TRUE	OK	1016.2	0.00362	0.1313	0.6712	-0.155	-0.077	1083.3	1042.3	1119.6	1052.5	813.9	985.5
E027	chr17	76061174	76061219	TRUE	OK	1057.3	0.00285	0.1239	0.6643	-0.144	-0.072	1137.9	1065.0	1161.8	1084.1	867.4	1027.9
E028	chr17	76061219	76061491	TRUE	OK	14.6	0.0102	0.9166	0.9803	0.040	0.020	14.5	15.8	13.3	11.9	14.7	17.1
E029	chr17	76061491	76061574	TRUE	OK	1237.5	0.00279	0.4132	0.8156	-0.073	-0.037	1304.2	1210.5	1339.1	1285.8	1045.4	1239.7
E030	chr17	76061574	76061653	TRUE	OK	23.2	0.00823	8.734e-05	0.01374	1.167	0.584	11.9	18.8	13.3	33.6	26.2	35.3
E031	chr17	76063975	76064022	TRUE	OK	1136.5	0.0031	0.6633	0.9055	0.046	0.023	1169.4	1038.3	1205.0	1221.5	1001.4	1183.2
E032	chr17	76064022	76064037	TRUE	OK	1010.7	0.00371	0.5511	0.8661	0.068	0.034	1035.5	910.6	1067.5	1086.1	885.2	1079.3
E033	chr17	76064037	76064127	TRUE	OK	1414.7	0.00438	0.7557	0.9346	0.039	0.020	1483.3	1282.8	1492.1	1521.0	1222.5	1486.8
E034	chr17	76064127	76064171	TRUE	OK	1130.7	0.0047	0.7454	0.9313	0.042	0.021	1203.5	1011.6	1183.9	1230.4	976.3	1178.2
E035	chr17	76067216	76067312	TRUE	OK	1650.5	0.00731	0.7283	0.9262	-0.040	-0.020	1790.4	1586.7	1708.3	1832.3	1325.1	1660.3
E036	chr17	76067312	76067330	TRUE	OK	1248.1	0.0122	0.4735	0.8379	-0.114	-0.057	1411.7	1266.9	1254.9	1418.2	915.5	1221.5
E037	chr17	76070377	76070436	TRUE	OK	1476.8	0.0101	0.4598	0.8329	-0.111	-0.055	1647.9	1520.3	1477.7	1631.7	1118.8	1464.6
E038	chr17	76070436	76070444	TRUE	OK	1308.2	0.00952	0.4527	0.8301	-0.109	-0.054	1434.7	1364.9	1315.8	1447.8	992.0	1294.2
E039	chr17	76072307	76072344	TRUE	OK	1333.2	0.00848	0.4509	0.8294	-0.105	-0.052	1460.3	1386.7	1341.3	1466.6	1029.7	1314.3
E040	chr17	76072344	76072491	TRUE	OK	1255.4	0.00801	0.5097	0.8515	-0.088	-0.044	1361.3	1310.5	1253.8	1380.6	980.5	1245.7
E041	chr17	76072491	76072497	TRUE	OK	96.5	0.018	0.691	0.9144	0.139	0.070	89.6	90.1	100.9	135.4	67.0	95.8
E042	chr17	76072497	76072507	TRUE	OK	49.0	0.0458	0.8022	0.9482	0.169	0.085	36.7	52.5	52.1	65.2	24.1	63.5
E043	chr17	76072507	76072517	TRUE	OK	12.1	0.0116	0.1307	0.6706	0.587	0.294	8.5	7.9	13.3	14.8	13.6	14.1
J044	chr17	76039933	76040418	TRUE	OK	1078.2	0.00269	0.4395	0.8257	-0.073	-0.037	1195.0	1034.3	1127.4	1073.3	1079.0	960.3
J045	chr17	76040474	76040902	TRUE	OK	1096.9	0.00118	0.0103	0.2921	-0.176	-0.088	1223.2	1083.8	1213.9	1029.8	1040.2	990.5
J046	chr17	76040978	76043828	TRUE	OK	1028.2	0.0017	0.03546	0.4792	-0.166	-0.083	1158.3	1019.5	1114.1	964.6	992.0	920.9
J047	chr17	76043958	76045291	TRUE	OK	740.4	0.00261	0.753	0.9338	-0.033	-0.017	834.2	688.9	753.8	713.5	718.6	733.3
J048	chr17	76045386	76046037	TRUE	OK	909.8	0.004	0.1237	0.664	-0.174	-0.087	1075.6	877.0	968.9	921.1	763.6	852.4
J049	chr17	76046194	76047905	TRUE	OK	1450.6	0.00698	0.04488	0.5165	-0.278	-0.139	1644.5	1452.0	1687.2	1489.3	1072.7	1357.7
J050	chr17	76047970	76050427	TRUE	OK	1374.5	0.00315	0.01666	0.3607	-0.236	-0.118	1479.9	1368.9	1636.2	1354.9	1104.1	1303.2
J051	chr17	76050526	76053448	TRUE	OK	47.7	0.00353	1.446e-33	1.2e-29	-2.924	-1.462	76.8	87.1	89.8	13.8	9.4	9.1
J052	chr17	76050526	76057402	TRUE	OK	1098.0	0.000559	0.8645	0.9662	-0.007	-0.003	1085.0	1095.7	1173.9	1123.7	1016.1	1093.4
J053	chr17	76057543	76060307	TRUE	OK	955.1	0.00117	0.5241	0.8567	-0.041	-0.020	966.4	966.0	1015.4	995.2	841.2	946.2
J054	chr17	76060390	76061109	TRUE	OK	845.3	0.00246	0.4135	0.8157	-0.070	-0.035	861.5	869.0	902.4	895.4	711.3	832.2
J055	chr17	76061219	76061491	TRUE	OK	901.8	0.00172	0.01995	0.3868	-0.183	-0.091	974.1	929.4	1002.1	910.2	742.7	852.4
J056	chr17	76061574	76063975	TRUE	OK	871.0	0.00366	0.96	0.9912	-0.001	-0.001	925.5	810.6	917.9	910.2	740.6	920.9
J057	chr17	76061653	76063975	FALSE	ALL_ZERO	0.0	NA	NA	NA	NA	NA	0.0	0.0	0.0	0.0	0.0	0.0
J058	chr17	76064171	76067216	TRUE	OK	897.9	0.00534	0.8816	0.971	0.024	0.012	965.6	812.6	935.6	979.4	752.1	942.1
J059	chr17	76064171	76070377	FALSE	LOW_COUNTS_INDEP_FILTER	3.1	0.323	0.6474	NA	NA	NA	7.7	0.0	1.1	5.9	2.1	2.0
J060	chr17	76067330	76070377	TRUE	OK	1136.4	0.0125	0.4036	0.8118	-0.139	-0.069	1295.7	1171.9	1140.7	1277.9	825.4	1106.5
J061	chr17	76067330	76072344	FALSE	LOW_COUNTS_INDEP_FILTER	2.6	0.156	0.2411	NA	NA	NA	1.7	3.0	0.0	1.0	3.1	7.1
J062	chr17	76070436	76072307	TRUE	OK	3.2	0.0341	0.182	0.7122	-1.014	-0.507	4.3	2.0	6.7	1.0	2.1	3.0
J063	chr17	76070444	76072307	TRUE	OK	1257.5	0.00851	0.3961	0.8084	-0.119	-0.060	1386.9	1301.6	1280.4	1371.7	959.5	1244.7

Color Codes
NO TEST	p > 0.05	p < 0.05	p < 0.005	p < 5e-04	p < 5e-05

Gene ENSG00000167881.15
expr	exprTX	normCt	normCtTX	rExpr	rExprTX	rawCt	rawCtTX
PLOT	PLOT	PLOT	PLOT	PLOT	PLOT	PLOT	PLOT
TABLE	TABLE	TABLE	TABLE	TABLE	TABLE	TABLE	TABLE