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Normalized Counts Table (ENSG00000161011.20)

binID	chr	start	end	testable	status	baseMean	dispersion	pvalue	padjust	log2FC (mutant/control)	log2FCvst (mutant/control)	Normalized Coverage Counts
												MCF10A-parental-DMSO-1	MCF10A-parental-DMSO-2	MCF10A-parental-DMSO-3	MCF10A-KI-DMSO-7	MCF10A-KI-DMSO-8	MCF10A-KI-DMSO-9
E001	chr5	179806397	179806407	TRUE	OK	38.6	0.0637	0.0527	0.5412	-0.837	-0.419	30.7	39.6	46.6	56.3	17.8	40.3
E002	chr5	179806407	179806591	TRUE	OK	1324.0	0.00349	1.704e-14	3.406e-11	-0.801	-0.400	1311.9	1221.4	1386.8	1406.3	1331.4	1286.1
E003	chr5	179807323	179808427	TRUE	OK	62.4	0.00818	6.292e-09	4.223e-06	-1.236	-0.618	62.3	79.2	73.2	63.3	46.1	50.4
E004	chr5	179811573	179811614	TRUE	OK	298.5	0.0114	0.0001124	0.01673	-0.736	-0.368	295.1	313.8	259.4	362.7	272.4	287.5
E005	chr5	179811614	179811682	TRUE	OK	391.9	0.00545	1.157e-08	7.361e-06	-0.782	-0.391	382.1	403.8	372.5	443.7	378.2	371.2
E006	chr5	179811987	179812406	TRUE	OK	52.7	0.0151	8.864e-06	0.002205	-1.180	-0.590	65.7	71.3	39.9	44.5	54.5	40.3
E007	chr5	179812406	179813024	TRUE	OK	248.9	0.00191	1.606e-26	9.942e-23	-1.113	-0.556	267.8	291.0	261.6	218.4	256.6	197.7
E008	chr5	179813024	179813598	TRUE	OK	193.1	0.00201	4.475e-34	3.784e-30	-1.381	-0.690	237.1	228.6	222.8	137.4	181.2	151.3
E009	chr5	179813598	179813641	TRUE	OK	46.9	0.00993	4.638e-10	4.144e-07	-1.503	-0.751	67.4	55.4	49.9	43.5	37.7	27.2
E010	chr5	179818877	179818966	FALSE	LOW_COUNTS_INDEP_FILTER	3.1	0.165	0.9214	NA	NA	NA	0.9	2.0	3.3	4.9	7.3	0.0
E011	chr5	179818966	179819037	TRUE	OK	5.1	0.17	0.4559	0.8314	-0.452	-0.226	6.0	4.0	3.3	5.9	11.5	0.0
E012	chr5	179820103	179820387	TRUE	OK	5.1	0.0908	0.03108	0.4578	-1.672	-0.836	7.7	10.9	1.1	4.0	3.1	4.0
E013	chr5	179820606	179820706	FALSE	LOW_COUNTS_INDEP_FILTER	1.5	0.085	0.3182	NA	NA	NA	1.7	2.0	1.1	2.0	0.0	2.0
E014	chr5	179820877	179820884	TRUE	OK	3.8	0.0317	0.8586	0.9646	-0.120	-0.060	2.6	4.0	2.2	4.0	6.3	4.0
E015	chr5	179820884	179820904	TRUE	OK	18.7	0.0103	0.367	0.7977	-0.293	-0.146	11.9	19.8	14.4	25.7	23.0	17.1
E016	chr5	179820904	179820920	TRUE	OK	1349.2	0.00588	0.7376	0.9288	0.041	0.020	1015.9	906.7	954.5	1858.0	1642.5	1717.8
E017	chr5	179820920	179821141	TRUE	OK	6422.2	0.00643	0.6631	0.9054	-0.062	-0.031	4904.6	4588.7	4790.0	8506.2	7596.7	8147.3
E018	chr5	179821550	179821567	TRUE	OK	34.3	0.0269	0.2067	0.7272	0.442	0.221	24.7	19.8	15.5	52.4	34.6	58.5
E019	chr5	179821567	179821707	TRUE	OK	68.3	0.0153	0.6596	0.9043	0.117	0.059	48.6	46.5	45.5	88.9	71.2	108.9
E020	chr5	179822484	179822888	TRUE	OK	357.7	0.0168	0.5738	0.8745	-0.137	-0.068	318.2	286.1	218.4	409.1	399.1	515.4
E021	chr5	179822888	179822957	TRUE	OK	211.2	0.0161	0.4866	0.8428	0.145	0.073	171.4	141.5	115.3	299.5	242.0	297.6
E022	chr5	179822957	179823025	TRUE	OK	7092.8	0.00795	0.3115	0.7759	-0.155	-0.077	5771.2	5245.0	5306.6	9483.6	8183.3	8566.9
E023	chr5	179823025	179823053	TRUE	OK	5562.4	0.0094	0.1806	0.7109	-0.220	-0.110	4721.2	4165.1	4259.0	7508.0	6219.2	6502.1
E024	chr5	179823564	179823857	TRUE	OK	183.6	0.00989	0.005543	0.214	0.538	0.269	116.0	109.9	82.0	247.1	331.0	215.9
E025	chr5	179823857	179823939	TRUE	OK	6644.1	0.00637	0.391	0.8063	-0.120	-0.060	5425.8	4682.8	4994.0	8778.9	8043.9	7939.5
E026	chr5	179823939	179823968	TRUE	OK	5827.5	0.005	0.7756	0.9406	-0.039	-0.020	4618.0	4050.3	4178.1	7703.7	7336.9	7078.1
E027	chr5	179823968	179824057	TRUE	OK	7501.8	0.00585	0.8058	0.9491	0.026	0.013	5874.4	5156.9	5093.8	10097.3	9644.6	9143.9
E028	chr5	179824057	179824087	TRUE	OK	6218.3	0.00524	0.4399	0.8259	0.089	0.044	4741.7	4232.4	4058.4	8438.0	8214.7	7624.8
E029	chr5	179824181	179824237	TRUE	OK	7746.6	0.0024	0.2811	0.7631	0.087	0.043	5586.1	5441.9	5237.9	10270.2	10485.7	9457.6
E030	chr5	179824237	179824287	TRUE	OK	6890.9	0.000973	0.0137	0.3322	0.133	0.067	4780.9	4757.0	4659.2	8989.4	9717.9	8440.8
E031	chr5	179824287	179824314	TRUE	OK	7290.4	0.000577	0.02541	0.4251	0.095	0.047	5079.4	5081.7	5093.8	9352.1	10209.2	8926.0
E032	chr5	179824314	179824323	TRUE	OK	7175.4	0.000493	0.05708	0.5524	0.075	0.038	5026.6	5024.2	5079.3	9114.9	9984.0	8823.1
E033	chr5	179825145	179825226	TRUE	OK	9728.5	0.00126	0.4171	0.8173	0.046	0.023	6898.8	6948.4	6918.4	12479.1	13098.3	12027.8
E034	chr5	179833031	179833227	TRUE	OK	11081.8	0.00145	0.4236	0.8196	0.048	0.024	7816.6	7888.7	7944.9	14277.7	14848.7	13714.3
E035	chr5	179833227	179833246	TRUE	OK	5165.8	0.00144	0.9524	0.9895	-0.006	-0.003	3736.9	3682.1	3824.5	6682.8	6856.1	6212.6
E036	chr5	179833246	179833386	TRUE	OK	277.2	0.00259	0.07652	0.5965	-0.198	-0.099	195.3	210.8	251.6	313.3	363.5	328.8
E037	chr5	179833586	179833782	TRUE	OK	10613.3	0.000974	0.5204	0.8554	-0.037	-0.018	7809.8	7620.5	7911.7	13334.9	14266.2	12736.9
E038	chr5	179836435	179836470	TRUE	OK	6581.5	0.0016	0.2692	0.7577	-0.077	-0.039	5151.9	4787.7	4776.7	8039.7	8915.5	7817.4
E039	chr5	179836470	179837218	TRUE	OK	20625.0	0.00367	0.3721	0.7996	0.101	0.050	14286.4	14617.4	14639.4	24476.8	31515.8	24213.9
E040	chr5	179837218	179837255	TRUE	OK	2398.5	0.00236	0.1005	0.6359	0.148	0.074	1563.5	1651.0	1671.7	2861.1	3775.3	2868.7
E041	chr5	179837255	179838078	TRUE	OK	3711.0	0.00314	0.1983	0.7224	0.134	0.067	2598.2	2501.2	2515.3	4411.7	5885.0	4354.6
J042	chr5	179806591	179811573	TRUE	OK	116.1	0.0127	0.0004958	0.04934	-0.759	-0.379	113.4	127.7	99.8	143.3	102.7	109.9
J043	chr5	179808427	179811573	TRUE	OK	3.6	0.0429	0.1461	0.685	-1.026	-0.513	2.6	5.9	3.3	5.9	2.1	2.0
J044	chr5	179811682	179811987	TRUE	OK	6.4	0.0181	7.531e-05	0.01228	-2.107	-1.054	9.4	7.9	10.0	6.9	2.1	2.0
J045	chr5	179811682	179812406	TRUE	OK	50.2	0.022	0.001199	0.08785	-0.991	-0.495	44.4	73.2	42.1	56.3	45.0	40.3
J046	chr5	179811682	179822957	TRUE	OK	220.6	0.00122	1.007e-12	1.465e-09	-0.704	-0.352	219.2	200.9	213.9	232.2	246.2	210.8
J047	chr5	179819037	179820103	FALSE	ALL_ZERO	0.0	NA	NA	NA	NA	NA	0.0	0.0	0.0	0.0	0.0	0.0
J048	chr5	179819037	179822957	FALSE	LOW_COUNTS_INDEP_FILTER	1.7	0.0582	0.4398	NA	NA	NA	1.7	1.0	2.2	2.0	3.1	0.0
J049	chr5	179820387	179822957	FALSE	LOW_COUNTS_INDEP_FILTER	0.3	0.252	0.1217	NA	NA	NA	0.9	0.0	1.1	0.0	0.0	0.0
J050	chr5	179820706	179822957	FALSE	LOW_COUNTS_INDEP_FILTER	0.3	0.254	0.4233	NA	NA	NA	0.0	0.0	0.0	1.0	0.0	1.0
J051	chr5	179821141	179821550	FALSE	LOW_COUNTS_INDEP_FILTER	0.7	0.156	0.1412	NA	NA	NA	0.0	0.0	0.0	2.0	2.1	0.0
J052	chr5	179821141	179822888	FALSE	LOW_COUNTS_INDEP_FILTER	2.3	0.219	0.2012	NA	NA	NA	6.8	0.0	2.2	2.0	1.0	2.0
J053	chr5	179821141	179822957	TRUE	OK	4461.0	0.0053	0.3874	0.8051	-0.110	-0.055	3492.9	3299.0	3326.7	5833.8	5279.5	5533.7
J054	chr5	179821141	179823025	FALSE	LOW_COUNTS_INDEP_FILTER	1.8	0.0435	0.6032	NA	NA	NA	1.7	2.0	1.1	2.0	2.1	2.0
J055	chr5	179821707	179822957	FALSE	LOW_COUNTS_INDEP_FILTER	1.9	0.047	0.1998	NA	NA	NA	0.9	0.0	1.1	3.0	4.2	2.0
J056	chr5	179823053	179823857	TRUE	OK	4406.1	0.0103	0.2091	0.7287	-0.217	-0.109	3787.2	3210.9	3424.3	5943.5	4860.5	5209.9
J057	chr5	179824087	179824181	TRUE	OK	5504.5	0.00518	0.3733	0.7999	0.102	0.051	4174.4	3765.2	3527.4	7478.3	7290.8	6790.6
J058	chr5	179824323	179825145	TRUE	OK	7026.6	0.000331	0.09028	0.6209	0.057	0.028	4939.6	4952.0	5032.8	8873.8	9716.8	8644.6
J059	chr5	179825226	179833031	TRUE	OK	6486.6	0.00118	0.3995	0.8099	0.047	0.024	4646.1	4584.8	4592.7	8332.2	8693.4	8070.6
J060	chr5	179833227	179836470	FALSE	ALL_ZERO	0.0	NA	NA	NA	NA	NA	0.0	0.0	0.0	0.0	0.0	0.0
J061	chr5	179833246	179833586	TRUE	OK	4647.2	0.000991	0.7276	0.926	-0.021	-0.011	3370.9	3322.8	3484.2	5947.5	6190.9	5567.0
J062	chr5	179833782	179836435	TRUE	OK	5191.0	0.000847	0.1761	0.7077	-0.071	-0.036	4000.4	3783.0	3803.4	6340.8	7051.9	6166.2
N063	chr5	179801969	179806486	TRUE	OK	966.5	0.00365	1.712e-13	2.929e-10	-0.799	-0.399	968.1	856.2	1040.9	1022.9	1013.0	897.7
N064	chr5	179806563	179811573	TRUE	OK	21.1	0.0471	0.02007	0.3877	-1.000	-0.500	25.6	23.8	17.7	31.6	12.6	15.1
N065	chr5	179807123	179811573	TRUE	OK	71.2	0.00981	0.0003336	0.03752	-0.783	-0.391	72.5	79.2	58.8	76.1	61.8	78.7
N066	chr5	179825226	179826185	TRUE	OK	9.6	0.0301	0.4418	0.8267	-0.400	-0.200	13.6	4.9	5.5	10.9	11.5	11.1
N067	chr5	179826291	179833031	TRUE	OK	78.6	0.0134	0.9447	0.9874	0.012	0.006	66.5	49.5	53.2	117.6	85.9	98.9
N068	chr5	179833437	179833586	TRUE	OK	12.9	0.0121	0.6175	0.8895	-0.193	-0.096	7.7	10.9	12.2	15.8	11.5	19.2
N069	chr5	179836565	179837716	TRUE	OK	32.6	0.0231	0.2071	0.7274	-0.440	-0.220	39.2	19.8	25.5	43.5	33.5	34.3
N070	chr5	179837204	179837759	TRUE	OK	55.3	0.0221	0.006476	0.2317	-0.833	-0.417	69.9	59.4	36.6	55.3	50.3	60.5
N071	chr5	179837885	179840871	TRUE	OK	39.5	0.01	0.09154	0.6234	-0.428	-0.214	37.5	33.7	31.0	42.5	37.7	54.5

Color Codes
NO TEST	p > 0.05	p < 0.05	p < 0.005	p < 5e-04	p < 5e-05

Gene ENSG00000161011.20
expr	exprTX	normCt	normCtTX	rExpr	rExprTX	rawCt	rawCtTX
PLOT	PLOT	PLOT	PLOT	PLOT	PLOT	PLOT	PLOT
TABLE	TABLE	TABLE	TABLE	TABLE	TABLE	TABLE	TABLE