| << | < Prev Gene | TOP | Next Gene > | >> | |
| binID | chr | start | end | testable | status | baseMean | dispersion | pvalue | padjust | log2FC (mutant/control) | log2FCvst (mutant/control) | Raw Counts | |||||
| MCF10A-parental-DMSO-1 | MCF10A-parental-DMSO-2 | MCF10A-parental-DMSO-3 | MCF10A-KI-DMSO-7 | MCF10A-KI-DMSO-8 | MCF10A-KI-DMSO-9 | ||||||||||||
| E001 | chr5 | 151029944 | 151029946 | TRUE | OK | 15.1 | 0.0116 | 0.6161 | 0.8891 | -0.171 | -0.086 | 13.0 | 13.0 | 16.0 | 14.0 | 21.0 | 13.0 |
| E002 | chr5 | 151029946 | 151029948 | TRUE | OK | 20.8 | 0.0104 | 0.6582 | 0.9038 | -0.130 | -0.065 | 19.0 | 16.0 | 22.0 | 18.0 | 29.0 | 20.0 |
| E003 | chr5 | 151029948 | 151029960 | TRUE | OK | 82.5 | 0.0115 | 0.2051 | 0.7262 | -0.260 | -0.130 | 93.0 | 76.0 | 71.0 | 78.0 | 113.0 | 66.0 |
| E004 | chr5 | 151029960 | 151030123 | TRUE | OK | 942.6 | 0.0157 | 0.3904 | 0.8061 | 0.227 | 0.114 | 826.0 | 771.0 | 678.0 | 948.0 | 1503.0 | 917.0 |
| E005 | chr5 | 151030123 | 151030483 | TRUE | OK | 2538.2 | 0.0141 | 0.2213 | 0.736 | 0.276 | 0.138 | 2226.0 | 2073.0 | 1809.0 | 2571.0 | 3857.0 | 2669.0 |
| E006 | chr5 | 151030483 | 151030491 | TRUE | OK | 919.9 | 0.00866 | 0.3873 | 0.805 | 0.162 | 0.081 | 878.0 | 724.0 | 681.0 | 941.0 | 1339.0 | 958.0 |
| E007 | chr5 | 151030491 | 151030580 | TRUE | OK | 1010.1 | 0.0082 | 0.3035 | 0.7726 | 0.183 | 0.092 | 938.0 | 822.0 | 727.0 | 1048.0 | 1474.0 | 1052.0 |
| E008 | chr5 | 151030580 | 151030618 | TRUE | OK | 820.6 | 0.00785 | 0.3265 | 0.7821 | 0.172 | 0.086 | 750.0 | 686.0 | 589.0 | 863.0 | 1193.0 | 842.0 |
| E009 | chr5 | 151030618 | 151030673 | TRUE | OK | 937.2 | 0.0071 | 0.5041 | 0.8492 | 0.118 | 0.059 | 884.0 | 786.0 | 693.0 | 936.0 | 1330.0 | 996.0 |
| E010 | chr5 | 151030673 | 151030688 | TRUE | OK | 685.8 | 0.00368 | 0.9127 | 0.9791 | 0.021 | 0.011 | 692.0 | 583.0 | 520.0 | 698.0 | 898.0 | 734.0 |
| E011 | chr5 | 151030688 | 151030747 | TRUE | OK | 759.0 | 0.00395 | 0.7237 | 0.9248 | 0.051 | 0.025 | 747.0 | 647.0 | 570.0 | 783.0 | 1010.0 | 806.0 |
| E012 | chr5 | 151032049 | 151032286 | TRUE | OK | 11.3 | 0.0142 | 0.789 | 0.9445 | 0.106 | 0.053 | 13.0 | 10.0 | 6.0 | 14.0 | 10.0 | 16.0 |
| E013 | chr5 | 151032286 | 151032383 | TRUE | OK | 712.9 | 0.00237 | 0.953 | 0.9896 | 0.011 | 0.005 | 695.0 | 641.0 | 535.0 | 748.0 | 908.0 | 760.0 |
| E014 | chr5 | 151032383 | 151032400 | TRUE | OK | 40.8 | 0.00646 | 0.602 | 0.8842 | -0.117 | -0.059 | 37.0 | 37.0 | 38.0 | 43.0 | 37.0 | 53.0 |
| E015 | chr5 | 151032400 | 151032865 | TRUE | OK | 23.0 | 0.00759 | 0.07285 | 0.5893 | -0.508 | -0.254 | 26.0 | 25.0 | 22.0 | 18.0 | 20.0 | 28.0 |
| E016 | chr5 | 151033479 | 151033579 | TRUE | OK | 5.0 | 0.03 | 0.7723 | 0.9397 | -0.171 | -0.086 | 4.0 | 6.0 | 4.0 | 8.0 | 5.0 | 3.0 |
| E017 | chr5 | 151033607 | 151033799 | TRUE | OK | 1077.3 | 0.00107 | 0.02196 | 0.4025 | -0.152 | -0.076 | 1120.0 | 950.0 | 921.0 | 1138.0 | 1193.0 | 1163.0 |
| E018 | chr5 | 151034495 | 151035001 | TRUE | OK | 19.7 | 0.00869 | 0.162 | 0.6973 | 0.442 | 0.221 | 17.0 | 12.0 | 14.0 | 23.0 | 22.0 | 30.0 |
| E019 | chr5 | 151035001 | 151035040 | TRUE | OK | 1060.7 | 0.000993 | 0.03069 | 0.456 | -0.140 | -0.070 | 1098.0 | 943.0 | 893.0 | 1141.0 | 1170.0 | 1141.0 |
| E020 | chr5 | 151035040 | 151035067 | TRUE | OK | 989.8 | 0.00109 | 0.009512 | 0.2812 | -0.176 | -0.088 | 1048.0 | 892.0 | 835.0 | 1059.0 | 1065.0 | 1065.0 |
| E021 | chr5 | 151035581 | 151035654 | TRUE | OK | 1304.5 | 0.00139 | 0.05191 | 0.5387 | -0.140 | -0.070 | 1365.0 | 1193.0 | 1052.0 | 1440.0 | 1398.0 | 1416.0 |
| E022 | chr5 | 151035654 | 151035707 | TRUE | OK | 1187.7 | 0.00167 | 0.2716 | 0.7589 | -0.086 | -0.043 | 1226.0 | 1096.0 | 910.0 | 1334.0 | 1305.0 | 1290.0 |
| E023 | chr5 | 151036789 | 151036921 | TRUE | OK | 1542.6 | 0.00188 | 0.8798 | 0.9705 | -0.014 | -0.007 | 1563.0 | 1388.0 | 1143.0 | 1754.0 | 1723.0 | 1728.0 |
| E024 | chr5 | 151036921 | 151037438 | TRUE | OK | 21.0 | 0.0103 | 0.002884 | 0.1488 | 0.963 | 0.482 | 13.0 | 16.0 | 7.0 | 30.0 | 25.0 | 35.0 |
| E025 | chr5 | 151039096 | 151039198 | TRUE | OK | 1439.2 | 0.00284 | 0.898 | 0.9754 | 0.010 | 0.005 | 1494.0 | 1271.0 | 1032.0 | 1648.0 | 1650.0 | 1588.0 |
| E026 | chr5 | 151039198 | 151039225 | TRUE | OK | 1202.4 | 0.0028 | 0.8451 | 0.9606 | -0.020 | -0.010 | 1270.0 | 1022.0 | 911.0 | 1387.0 | 1351.0 | 1312.0 |
| E027 | chr5 | 151042539 | 151042671 | TRUE | OK | 1883.4 | 0.00274 | 0.5636 | 0.871 | -0.055 | -0.028 | 1970.0 | 1668.0 | 1432.0 | 2159.0 | 2055.0 | 2077.0 |
| E028 | chr5 | 151042895 | 151042897 | TRUE | OK | 1274.5 | 0.00329 | 0.2243 | 0.7374 | -0.125 | -0.063 | 1336.0 | 1152.0 | 1024.0 | 1472.0 | 1312.0 | 1391.0 |
| E029 | chr5 | 151042897 | 151042961 | TRUE | OK | 1755.9 | 0.00337 | 0.1855 | 0.7144 | -0.136 | -0.068 | 1811.0 | 1591.0 | 1437.0 | 1986.0 | 1783.0 | 1975.0 |
| E030 | chr5 | 151045860 | 151045865 | TRUE | OK | 1481.0 | 0.00534 | 0.2315 | 0.741 | -0.152 | -0.076 | 1542.0 | 1353.0 | 1214.0 | 1699.0 | 1435.0 | 1689.0 |
| E031 | chr5 | 151045865 | 151045920 | TRUE | OK | 1786.1 | 0.00524 | 0.2713 | 0.7587 | -0.138 | -0.069 | 1843.0 | 1615.0 | 1466.0 | 2041.0 | 1749.0 | 2054.0 |
| E032 | chr5 | 151045920 | 151045950 | TRUE | OK | 1570.1 | 0.00698 | 0.3479 | 0.7904 | -0.134 | -0.067 | 1666.0 | 1368.0 | 1298.0 | 1785.0 | 1503.0 | 1852.0 |
| E033 | chr5 | 151045950 | 151046361 | TRUE | OK | 30.0 | 0.0334 | 0.3493 | 0.7909 | 0.384 | 0.192 | 21.0 | 26.0 | 20.0 | 39.0 | 22.0 | 52.0 |
| E034 | chr5 | 151049823 | 151049903 | TRUE | OK | 1625.6 | 0.00512 | 0.3761 | 0.8009 | -0.110 | -0.055 | 1691.0 | 1438.0 | 1318.0 | 1831.0 | 1607.0 | 1917.0 |
| E035 | chr5 | 151049903 | 151049947 | TRUE | OK | 1261.8 | 0.00472 | 0.3902 | 0.806 | -0.104 | -0.052 | 1351.0 | 1127.0 | 981.0 | 1403.0 | 1265.0 | 1491.0 |
| E036 | chr5 | 151052164 | 151052259 | TRUE | OK | 1387.2 | 0.00635 | 0.6264 | 0.8928 | -0.070 | -0.035 | 1531.0 | 1225.0 | 1016.0 | 1591.0 | 1415.0 | 1610.0 |
| E037 | chr5 | 151056765 | 151056957 | TRUE | OK | 1737.1 | 0.0052 | 0.5969 | 0.8824 | -0.068 | -0.034 | 1875.0 | 1507.0 | 1323.0 | 1995.0 | 1788.0 | 2003.0 |
| E038 | chr5 | 151060317 | 151060321 | TRUE | OK | 1055.4 | 0.00507 | 0.6682 | 0.9071 | -0.056 | -0.028 | 1154.0 | 894.0 | 804.0 | 1183.0 | 1090.0 | 1250.0 |
| E039 | chr5 | 151060321 | 151060353 | TRUE | OK | 1278.2 | 0.00509 | 0.2423 | 0.7461 | -0.147 | -0.074 | 1415.0 | 1101.0 | 1040.0 | 1423.0 | 1279.0 | 1461.0 |
| E040 | chr5 | 151060353 | 151060395 | TRUE | OK | 1222.9 | 0.00632 | 0.2296 | 0.7402 | -0.167 | -0.084 | 1375.0 | 1053.0 | 1000.0 | 1379.0 | 1194.0 | 1388.0 |
| E041 | chr5 | 151062126 | 151062212 | TRUE | OK | 1553.5 | 0.00707 | 0.1262 | 0.6664 | -0.222 | -0.111 | 1717.0 | 1341.0 | 1353.0 | 1735.0 | 1478.0 | 1751.0 |
| E042 | chr5 | 151063612 | 151063747 | TRUE | OK | 1543.4 | 0.00626 | 0.3311 | 0.7838 | -0.133 | -0.067 | 1634.0 | 1326.0 | 1295.0 | 1765.0 | 1504.0 | 1783.0 |
| E043 | chr5 | 151064959 | 151065095 | TRUE | OK | 1237.7 | 0.00756 | 0.7726 | 0.9398 | 0.044 | 0.022 | 1190.0 | 1086.0 | 934.0 | 1518.0 | 1213.0 | 1517.0 |
| E044 | chr5 | 151065095 | 151065131 | TRUE | OK | 649.0 | 0.0139 | 0.5817 | 0.8773 | 0.115 | 0.058 | 576.0 | 604.0 | 455.0 | 873.0 | 602.0 | 800.0 |
| E045 | chr5 | 151078402 | 151078443 | FALSE | LOW_COUNTS_INDEP_FILTER | 1.1 | 0.438 | 0.9272 | NA | NA | NA | 0.0 | 0.0 | 3.0 | 0.0 | 1.0 | 2.0 |
| E046 | chr5 | 151080072 | 151080323 | TRUE | OK | 5.8 | 0.118 | 0.299 | 0.7711 | -0.919 | -0.459 | 1.0 | 10.0 | 9.0 | 4.0 | 4.0 | 6.0 |
| E047 | chr5 | 151080323 | 151080359 | TRUE | OK | 8.4 | 0.0214 | 0.1736 | 0.7061 | -0.644 | -0.322 | 11.0 | 11.0 | 6.0 | 8.0 | 4.0 | 11.0 |
| E048 | chr5 | 151080879 | 151081015 | TRUE | OK | 526.8 | 0.0166 | 0.002986 | 0.152 | -0.648 | -0.324 | 612.0 | 630.0 | 490.0 | 584.0 | 368.0 | 505.0 |
| E049 | chr5 | 151081015 | 151081016 | TRUE | OK | 79.6 | 0.0278 | 0.07765 | 0.5985 | -0.534 | -0.267 | 107.0 | 93.0 | 58.0 | 105.0 | 59.0 | 64.0 |
| E050 | chr5 | 151081016 | 151081034 | TRUE | OK | 80.1 | 0.0267 | 0.1152 | 0.6547 | -0.491 | -0.245 | 112.0 | 93.0 | 52.0 | 99.0 | 61.0 | 73.0 |
| E051 | chr5 | 151081034 | 151081054 | TRUE | OK | 54.8 | 0.0365 | 0.6862 | 0.913 | -0.208 | -0.104 | 81.0 | 56.0 | 24.0 | 61.0 | 59.0 | 55.0 |
| E052 | chr5 | 151081054 | 151081074 | TRUE | OK | 32.5 | 0.0607 | 0.8666 | 0.9668 | -0.168 | -0.084 | 53.0 | 31.0 | 11.0 | 28.0 | 41.0 | 36.0 |
| E053 | chr5 | 151081074 | 151081084 | TRUE | OK | 22.7 | 0.0101 | 0.3099 | 0.7752 | 0.310 | 0.155 | 25.0 | 16.0 | 12.0 | 21.0 | 33.0 | 30.0 |
| E054 | chr5 | 151087084 | 151087158 | TRUE | OK | 142.6 | 0.0184 | 2.048e-46 | 3.915e-42 | 4.587 | 2.293 | 8.0 | 12.0 | 7.0 | 316.0 | 214.0 | 290.0 |
| E055 | chr5 | 151087158 | 151087166 | TRUE | OK | 10.0 | 0.0197 | 2.5e-09 | 1.856e-06 | 3.866 | 1.933 | 2.0 | 0.0 | 1.0 | 13.0 | 20.0 | 23.0 |
| E056 | chr5 | 151087590 | 151087660 | FALSE | LOW_COUNTS_INDEP_FILTER | 0.5 | 0.844 | 0.424 | NA | NA | NA | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 3.0 |
| E057 | chr5 | 151093437 | 151093577 | TRUE | OK | 10.9 | 0.0163 | 0.677 | 0.91 | 0.172 | 0.086 | 13.0 | 7.0 | 7.0 | 15.0 | 9.0 | 15.0 |
| J058 | chr5 | 151030123 | 151035040 | TRUE | OK | 3.8 | 0.0289 | 0.4336 | 0.8234 | 0.545 | 0.273 | 3.0 | 2.0 | 3.0 | 3.0 | 4.0 | 8.0 |
| J059 | chr5 | 151030673 | 151032286 | TRUE | OK | 43.1 | 0.0123 | 0.1765 | 0.708 | 0.375 | 0.187 | 36.0 | 33.0 | 28.0 | 37.0 | 70.0 | 54.0 |
| J060 | chr5 | 151030747 | 151032286 | TRUE | OK | 548.3 | 0.00225 | 0.8352 | 0.9577 | -0.013 | -0.007 | 540.0 | 484.0 | 427.0 | 568.0 | 702.0 | 575.0 |
| J061 | chr5 | 151030747 | 151035001 | FALSE | LOW_COUNTS_INDEP_FILTER | 0.3 | 0.25 | 0.1722 | NA | NA | NA | 0.0 | 1.0 | 1.0 | 0.0 | 0.0 | 0.0 |
| J062 | chr5 | 151032383 | 151033479 | FALSE | ALL_ZERO | 0.0 | NA | NA | NA | NA | NA | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 |
| J063 | chr5 | 151032383 | 151033607 | TRUE | OK | 273.0 | 0.00174 | 0.672 | 0.9083 | 0.044 | 0.022 | 257.0 | 253.0 | 197.0 | 308.0 | 340.0 | 287.0 |
| J064 | chr5 | 151032383 | 151035001 | TRUE | OK | 9.0 | 0.0943 | 0.4065 | 0.8128 | -0.475 | -0.238 | 8.0 | 13.0 | 7.0 | 14.0 | 10.0 | 2.0 |
| J065 | chr5 | 151032400 | 151033607 | TRUE | OK | 15.2 | 0.0702 | 0.3825 | 0.8032 | -0.435 | -0.217 | 19.0 | 10.0 | 18.0 | 17.0 | 6.0 | 22.0 |
| J066 | chr5 | 151032865 | 151045920 | FALSE | LOW_COUNTS_INDEP_FILTER | 0.5 | 0.15 | 0.1513 | NA | NA | NA | 0.0 | 0.0 | 0.0 | 1.0 | 1.0 | 1.0 |
| J067 | chr5 | 151033579 | 151035001 | FALSE | ALL_ZERO | 0.0 | NA | NA | NA | NA | NA | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 |
| J068 | chr5 | 151033799 | 151035001 | TRUE | OK | 793.7 | 0.00152 | 0.0203 | 0.3894 | -0.182 | -0.091 | 858.0 | 689.0 | 686.0 | 841.0 | 853.0 | 856.0 |
| J069 | chr5 | 151035067 | 151035581 | TRUE | OK | 890.1 | 0.00109 | 0.00425 | 0.1857 | -0.197 | -0.099 | 942.0 | 816.0 | 757.0 | 966.0 | 931.0 | 952.0 |
| J070 | chr5 | 151035707 | 151036789 | TRUE | OK | 911.1 | 0.00118 | 0.3223 | 0.7803 | -0.070 | -0.035 | 947.0 | 830.0 | 691.0 | 1016.0 | 1029.0 | 981.0 |
| J071 | chr5 | 151036921 | 151039096 | TRUE | OK | 933.3 | 0.00263 | 0.6589 | 0.9041 | -0.044 | -0.022 | 974.0 | 852.0 | 683.0 | 1058.0 | 1004.0 | 1062.0 |
| J072 | chr5 | 151039225 | 151042539 | TRUE | OK | 1007.8 | 0.00211 | 0.6841 | 0.9124 | -0.036 | -0.018 | 1072.0 | 856.0 | 771.0 | 1134.0 | 1162.0 | 1083.0 |
| J073 | chr5 | 151042671 | 151042895 | TRUE | OK | 1243.5 | 0.00298 | 0.1658 | 0.701 | -0.137 | -0.068 | 1315.0 | 1122.0 | 1004.0 | 1431.0 | 1283.0 | 1346.0 |
| J074 | chr5 | 151042961 | 151045860 | TRUE | OK | 1454.3 | 0.00502 | 0.2298 | 0.7403 | -0.148 | -0.074 | 1506.0 | 1336.0 | 1188.0 | 1670.0 | 1413.0 | 1657.0 |
| J075 | chr5 | 151045950 | 151049823 | TRUE | OK | 1295.6 | 0.00566 | 0.2226 | 0.7366 | -0.159 | -0.079 | 1349.0 | 1154.0 | 1099.0 | 1448.0 | 1241.0 | 1518.0 |
| J076 | chr5 | 151049947 | 151052164 | TRUE | OK | 976.3 | 0.00454 | 0.8331 | 0.9571 | -0.029 | -0.014 | 1054.0 | 867.0 | 696.0 | 1099.0 | 1035.0 | 1149.0 |
| J077 | chr5 | 151052259 | 151056765 | TRUE | OK | 819.1 | 0.00581 | 0.3126 | 0.7763 | -0.138 | -0.069 | 912.0 | 742.0 | 627.0 | 963.0 | 811.0 | 898.0 |
| J078 | chr5 | 151056957 | 151060317 | TRUE | OK | 1032.2 | 0.0046 | 0.6536 | 0.9019 | -0.056 | -0.028 | 1127.0 | 873.0 | 789.0 | 1158.0 | 1071.0 | 1216.0 |
| J079 | chr5 | 151060395 | 151062126 | TRUE | OK | 946.2 | 0.00703 | 0.1 | 0.6352 | -0.241 | -0.121 | 1087.0 | 821.0 | 814.0 | 1057.0 | 888.0 | 1051.0 |
| J080 | chr5 | 151062212 | 151063612 | TRUE | OK | 1058.6 | 0.00756 | 0.0546 | 0.5463 | -0.291 | -0.146 | 1191.0 | 919.0 | 973.0 | 1174.0 | 978.0 | 1153.0 |
| J081 | chr5 | 151063747 | 151064959 | TRUE | OK | 788.7 | 0.00326 | 0.6973 | 0.9163 | 0.040 | 0.020 | 793.0 | 657.0 | 601.0 | 916.0 | 832.0 | 954.0 |
| J082 | chr5 | 151063747 | 151080879 | TRUE | OK | 79.8 | 0.00704 | 4.318e-07 | 0.0001767 | -0.980 | -0.490 | 107.0 | 83.0 | 101.0 | 68.0 | 54.0 | 69.0 |
| J083 | chr5 | 151063747 | 151087084 | TRUE | OK | 9.6 | 0.0104 | 2.141e-12 | 2.988e-09 | 5.450 | 2.725 | 1.0 | 0.0 | 0.0 | 17.0 | 20.0 | 19.0 |
| J084 | chr5 | 151065131 | 151080323 | TRUE | OK | 5.0 | 0.0225 | 0.082 | 0.6063 | -1.018 | -0.509 | 10.0 | 6.0 | 3.0 | 4.0 | 3.0 | 5.0 |
| J085 | chr5 | 151065131 | 151080879 | TRUE | OK | 408.5 | 0.021 | 0.02016 | 0.3884 | -0.568 | -0.284 | 450.0 | 494.0 | 367.0 | 476.0 | 284.0 | 400.0 |
| J086 | chr5 | 151065131 | 151087084 | TRUE | OK | 128.7 | 0.0264 | 2.471e-35 | 2.362e-31 | 4.542 | 2.271 | 6.0 | 12.0 | 7.0 | 292.0 | 185.0 | 263.0 |
| J087 | chr5 | 151065131 | 151087590 | FALSE | LOW_COUNTS_INDEP_FILTER | 0.2 | 0.531 | 0.6722 | NA | NA | NA | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 1.0 |
| J088 | chr5 | 151065131 | 151093437 | TRUE | OK | 9.0 | 0.0148 | 0.9738 | 0.9944 | 0.012 | 0.006 | 12.0 | 7.0 | 5.0 | 11.0 | 7.0 | 13.0 |
| J089 | chr5 | 151078443 | 151080072 | FALSE | ALL_ZERO | 0.0 | NA | NA | NA | NA | NA | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 |
| J090 | chr5 | 151080359 | 151080879 | TRUE | OK | 6.1 | 0.0691 | 0.8071 | 0.9496 | -0.187 | -0.094 | 11.0 | 5.0 | 2.0 | 6.0 | 4.0 | 10.0 |
| Color Codes | |||||
|---|---|---|---|---|---|
| NO TEST | p > 0.05 | p < 0.05 | p < 0.005 | p < 5e-04 | p < 5e-05 |
| Gene ENSG00000145901.15 | |||||||
|---|---|---|---|---|---|---|---|
| expr | exprTX | normCt | normCtTX | rExpr | rExprTX | rawCt | rawCtTX |
| PLOT | PLOT | PLOT | PLOT | PLOT | PLOT | PLOT | PLOT |
| TABLE | TABLE | TABLE | TABLE | TABLE | TABLE | TABLE | TABLE |