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Normalized Counts Table (ENSG00000145901.15)

binID	chr	start	end	testable	status	baseMean	dispersion	pvalue	padjust	log2FC (mutant/control)	log2FCvst (mutant/control)	Normalized Coverage Counts
												MCF10A-parental-DMSO-1	MCF10A-parental-DMSO-2	MCF10A-parental-DMSO-3	MCF10A-KI-DMSO-7	MCF10A-KI-DMSO-8	MCF10A-KI-DMSO-9
E001	chr5	151029944	151029946	TRUE	OK	15.1	0.0116	0.6161	0.8891	-0.171	-0.086	11.1	12.9	17.7	13.8	22.0	13.1
E002	chr5	151029946	151029948	TRUE	OK	20.8	0.0104	0.6582	0.9038	-0.130	-0.065	16.2	15.8	24.4	17.8	30.4	20.2
E003	chr5	151029948	151029960	TRUE	OK	82.5	0.0115	0.2051	0.7262	-0.260	-0.130	79.3	75.2	78.7	77.1	118.4	66.6
E004	chr5	151029960	151030123	TRUE	OK	942.6	0.0157	0.3904	0.8061	0.227	0.114	704.6	763.1	751.6	936.9	1574.4	925.0
E005	chr5	151030123	151030483	TRUE	OK	2538.2	0.0141	0.2213	0.736	0.276	0.138	1898.7	2051.9	2005.4	2540.9	4040.3	2692.2
E006	chr5	151030483	151030491	TRUE	OK	919.9	0.00866	0.3873	0.805	0.162	0.081	748.9	716.6	754.9	930.0	1402.6	966.3
E007	chr5	151030491	151030580	TRUE	OK	1010.1	0.0082	0.3035	0.7726	0.183	0.092	800.1	813.6	805.9	1035.7	1544.1	1061.2
E008	chr5	151030580	151030618	TRUE	OK	820.6	0.00785	0.3265	0.7821	0.172	0.086	639.7	679.0	652.9	852.9	1249.7	849.3
E009	chr5	151030618	151030673	TRUE	OK	937.2	0.0071	0.5041	0.8492	0.118	0.059	754.0	778.0	768.2	925.0	1393.2	1004.7
E010	chr5	151030673	151030688	TRUE	OK	685.8	0.00368	0.9127	0.9791	0.021	0.011	590.3	577.1	576.4	689.8	940.7	740.4
E011	chr5	151030688	151030747	TRUE	OK	759.0	0.00395	0.7237	0.9248	0.051	0.025	637.2	640.4	631.9	773.8	1058.0	813.0
E012	chr5	151032049	151032286	TRUE	OK	11.3	0.0142	0.789	0.9445	0.106	0.053	11.1	9.9	6.7	13.8	10.5	16.1
E013	chr5	151032286	151032383	TRUE	OK	712.9	0.00237	0.953	0.9896	0.011	0.005	592.8	634.5	593.1	739.2	951.2	766.6
E014	chr5	151032383	151032400	TRUE	OK	40.8	0.00646	0.602	0.8842	-0.117	-0.059	31.6	36.6	42.1	42.5	38.8	53.5
E015	chr5	151032400	151032865	TRUE	OK	23.0	0.00759	0.07285	0.5893	-0.508	-0.254	22.2	24.7	24.4	17.8	21.0	28.2
E016	chr5	151033479	151033579	TRUE	OK	5.0	0.03	0.7723	0.9397	-0.171	-0.086	3.4	5.9	4.4	7.9	5.2	3.0
E017	chr5	151033607	151033799	TRUE	OK	1077.3	0.00107	0.02196	0.4025	-0.152	-0.076	955.3	940.3	1021.0	1124.7	1249.7	1173.1
E018	chr5	151034495	151035001	TRUE	OK	19.7	0.00869	0.162	0.6973	0.442	0.221	14.5	11.9	15.5	22.7	23.0	30.3
E019	chr5	151035001	151035040	TRUE	OK	1060.7	0.000993	0.03069	0.456	-0.140	-0.070	936.6	933.4	989.9	1127.6	1225.6	1150.9
E020	chr5	151035040	151035067	TRUE	OK	989.8	0.00109	0.009512	0.2812	-0.176	-0.088	893.9	882.9	925.6	1046.6	1115.6	1074.3
E021	chr5	151035581	151035654	TRUE	OK	1304.5	0.00139	0.05191	0.5387	-0.140	-0.070	1164.3	1180.8	1166.2	1423.1	1464.4	1428.3
E022	chr5	151035654	151035707	TRUE	OK	1187.7	0.00167	0.2716	0.7589	-0.086	-0.043	1045.7	1084.8	1008.8	1318.4	1367.0	1301.2
E023	chr5	151036789	151036921	TRUE	OK	1542.6	0.00188	0.8798	0.9705	-0.014	-0.007	1333.2	1373.8	1267.1	1733.5	1804.9	1743.0
E024	chr5	151036921	151037438	TRUE	OK	21.0	0.0103	0.002884	0.1488	0.963	0.482	11.1	15.8	7.8	29.6	26.2	35.3
E025	chr5	151039096	151039198	TRUE	OK	1439.2	0.00284	0.898	0.9754	0.010	0.005	1274.3	1258.0	1144.0	1628.7	1728.4	1601.8
E026	chr5	151039198	151039225	TRUE	OK	1202.4	0.0028	0.8451	0.9606	-0.020	-0.010	1083.3	1011.6	1009.9	1370.7	1415.2	1323.4
E027	chr5	151042539	151042671	TRUE	OK	1883.4	0.00274	0.5636	0.871	-0.055	-0.028	1680.4	1651.0	1587.4	2133.7	2152.7	2095.1
E028	chr5	151042895	151042897	TRUE	OK	1274.5	0.00329	0.2243	0.7374	-0.125	-0.063	1139.6	1140.3	1135.1	1454.8	1374.4	1403.1
E029	chr5	151042897	151042961	TRUE	OK	1755.9	0.00337	0.1855	0.7144	-0.136	-0.068	1544.7	1574.8	1593.0	1962.7	1867.7	1992.2
E030	chr5	151045860	151045865	TRUE	OK	1481.0	0.00534	0.2315	0.741	-0.152	-0.076	1315.3	1339.2	1345.8	1679.1	1503.2	1703.7
E031	chr5	151045865	151045920	TRUE	OK	1786.1	0.00524	0.2713	0.7587	-0.138	-0.069	1572.0	1598.5	1625.1	2017.1	1832.1	2071.9
E032	chr5	151045920	151045950	TRUE	OK	1570.1	0.00698	0.3479	0.7904	-0.134	-0.067	1421.1	1354.1	1438.9	1764.1	1574.4	1868.1
E033	chr5	151045950	151046361	TRUE	OK	30.0	0.0334	0.3493	0.7909	0.384	0.192	17.9	25.7	22.2	38.5	23.0	52.5
E034	chr5	151049823	151049903	TRUE	OK	1625.6	0.00512	0.3761	0.8009	-0.110	-0.055	1442.4	1423.3	1461.1	1809.5	1683.4	1933.7
E035	chr5	151049903	151049947	TRUE	OK	1261.8	0.00472	0.3902	0.806	-0.104	-0.052	1152.4	1115.5	1087.5	1386.6	1325.1	1504.0
E036	chr5	151052164	151052259	TRUE	OK	1387.2	0.00635	0.6264	0.8928	-0.070	-0.035	1305.9	1212.5	1126.3	1572.4	1482.2	1624.0
E037	chr5	151056765	151056957	TRUE	OK	1737.1	0.0052	0.5969	0.8824	-0.068	-0.034	1599.3	1491.6	1466.6	1971.6	1873.0	2020.4
E038	chr5	151060317	151060321	TRUE	OK	1055.4	0.00507	0.6682	0.9071	-0.056	-0.028	984.3	884.9	891.3	1169.1	1141.8	1260.9
E039	chr5	151060321	151060353	TRUE	OK	1278.2	0.00509	0.2423	0.7461	-0.147	-0.074	1207.0	1089.8	1152.9	1406.3	1339.8	1473.7
E040	chr5	151060353	151060395	TRUE	OK	1222.9	0.00632	0.2296	0.7402	-0.167	-0.084	1172.8	1042.3	1108.5	1362.8	1250.7	1400.1
E041	chr5	151062126	151062212	TRUE	OK	1553.5	0.00707	0.1262	0.6664	-0.222	-0.111	1464.6	1327.3	1499.9	1714.7	1548.2	1766.2
E042	chr5	151063612	151063747	TRUE	OK	1543.4	0.00626	0.3311	0.7838	-0.133	-0.067	1393.8	1312.5	1435.6	1744.3	1575.5	1798.5
E043	chr5	151064959	151065095	TRUE	OK	1237.7	0.00756	0.7726	0.9398	0.044	0.022	1015.0	1074.9	1035.4	1500.2	1270.6	1530.2
E044	chr5	151065095	151065131	TRUE	OK	649.0	0.0139	0.5817	0.8773	0.115	0.058	491.3	597.8	504.4	862.8	630.6	807.0
E045	chr5	151078402	151078443	FALSE	LOW_COUNTS_INDEP_FILTER	1.1	0.438	0.9272	NA	NA	NA	0.0	0.0	3.3	0.0	1.0	2.0
E046	chr5	151080072	151080323	TRUE	OK	5.8	0.118	0.299	0.7711	-0.919	-0.459	0.9	9.9	10.0	4.0	4.2	6.1
E047	chr5	151080323	151080359	TRUE	OK	8.4	0.0214	0.1736	0.7061	-0.644	-0.322	9.4	10.9	6.7	7.9	4.2	11.1
E048	chr5	151080879	151081015	TRUE	OK	526.8	0.0166	0.002986	0.152	-0.648	-0.324	522.0	623.6	543.2	577.2	385.5	509.4
E049	chr5	151081015	151081016	TRUE	OK	79.6	0.0278	0.07765	0.5985	-0.534	-0.267	91.3	92.1	64.3	103.8	61.8	64.6
E050	chr5	151081016	151081034	TRUE	OK	80.1	0.0267	0.1152	0.6547	-0.491	-0.245	95.5	92.1	57.6	97.8	63.9	73.6
E051	chr5	151081034	151081054	TRUE	OK	54.8	0.0365	0.6862	0.913	-0.208	-0.104	69.1	55.4	26.6	60.3	61.8	55.5
E052	chr5	151081054	151081074	TRUE	OK	32.5	0.0607	0.8666	0.9668	-0.168	-0.084	45.2	30.7	12.2	27.7	42.9	36.3
E053	chr5	151081074	151081084	TRUE	OK	22.7	0.0101	0.3099	0.7752	0.310	0.155	21.3	15.8	13.3	20.8	34.6	30.3
E054	chr5	151087084	151087158	TRUE	OK	142.6	0.0184	2.048e-46	3.915e-42	4.587	2.293	6.8	11.9	7.8	312.3	224.2	292.5
E055	chr5	151087158	151087166	TRUE	OK	10.0	0.0197	2.5e-09	1.856e-06	3.866	1.933	1.7	0.0	1.1	12.8	21.0	23.2
E056	chr5	151087590	151087660	FALSE	LOW_COUNTS_INDEP_FILTER	0.5	0.844	0.424	NA	NA	NA	0.0	0.0	0.0	0.0	0.0	3.0
E057	chr5	151093437	151093577	TRUE	OK	10.9	0.0163	0.677	0.91	0.172	0.086	11.1	6.9	7.8	14.8	9.4	15.1
J058	chr5	151030123	151035040	TRUE	OK	3.8	0.0289	0.4336	0.8234	0.545	0.273	2.6	2.0	3.3	3.0	4.2	8.1
J059	chr5	151030673	151032286	TRUE	OK	43.1	0.0123	0.1765	0.708	0.375	0.187	30.7	32.7	31.0	36.6	73.3	54.5
J060	chr5	151030747	151032286	TRUE	OK	548.3	0.00225	0.8352	0.9577	-0.013	-0.007	460.6	479.1	473.3	561.3	735.4	580.0
J061	chr5	151030747	151035001	FALSE	LOW_COUNTS_INDEP_FILTER	0.3	0.25	0.1722	NA	NA	NA	0.0	1.0	1.1	0.0	0.0	0.0
J062	chr5	151032383	151033479	FALSE	ALL_ZERO	0.0	NA	NA	NA	NA	NA	0.0	0.0	0.0	0.0	0.0	0.0
J063	chr5	151032383	151033607	TRUE	OK	273.0	0.00174	0.672	0.9083	0.044	0.022	219.2	250.4	218.4	304.4	356.2	289.5
J064	chr5	151032383	151035001	TRUE	OK	9.0	0.0943	0.4065	0.8128	-0.475	-0.238	6.8	12.9	7.8	13.8	10.5	2.0
J065	chr5	151032400	151033607	TRUE	OK	15.2	0.0702	0.3825	0.8032	-0.435	-0.217	16.2	9.9	20.0	16.8	6.3	22.2
J066	chr5	151032865	151045920	FALSE	LOW_COUNTS_INDEP_FILTER	0.5	0.15	0.1513	NA	NA	NA	0.0	0.0	0.0	1.0	1.0	1.0
J067	chr5	151033579	151035001	FALSE	ALL_ZERO	0.0	NA	NA	NA	NA	NA	0.0	0.0	0.0	0.0	0.0	0.0
J068	chr5	151033799	151035001	TRUE	OK	793.7	0.00152	0.0203	0.3894	-0.182	-0.091	731.8	682.0	760.5	831.1	893.5	863.4
J069	chr5	151035067	151035581	TRUE	OK	890.1	0.00109	0.00425	0.1857	-0.197	-0.099	803.5	807.7	839.2	954.7	975.2	960.3
J070	chr5	151035707	151036789	TRUE	OK	911.1	0.00118	0.3223	0.7803	-0.070	-0.035	807.8	821.5	766.0	1004.1	1077.9	989.5
J071	chr5	151036921	151039096	TRUE	OK	933.3	0.00263	0.6589	0.9041	-0.044	-0.022	830.8	843.3	757.1	1045.6	1051.7	1071.2
J072	chr5	151039225	151042539	TRUE	OK	1007.8	0.00211	0.6841	0.9124	-0.036	-0.018	914.4	847.3	854.7	1120.7	1217.2	1092.4
J073	chr5	151042671	151042895	TRUE	OK	1243.5	0.00298	0.1658	0.701	-0.137	-0.068	1121.7	1110.6	1113.0	1414.2	1344.0	1357.7
J074	chr5	151042961	151045860	TRUE	OK	1454.3	0.00502	0.2298	0.7403	-0.148	-0.074	1284.6	1322.4	1316.9	1650.4	1480.2	1671.4
J075	chr5	151045950	151049823	TRUE	OK	1295.6	0.00566	0.2226	0.7366	-0.159	-0.079	1150.7	1142.2	1218.3	1431.0	1300.0	1531.2
J076	chr5	151049947	151052164	TRUE	OK	976.3	0.00454	0.8331	0.9571	-0.029	-0.014	899.0	858.2	771.5	1086.1	1084.2	1159.0
J077	chr5	151052259	151056765	TRUE	OK	819.1	0.00581	0.3126	0.7763	-0.138	-0.069	777.9	734.4	695.1	951.7	849.5	905.8
J078	chr5	151056957	151060317	TRUE	OK	1032.2	0.0046	0.6536	0.9019	-0.056	-0.028	961.3	864.1	874.6	1144.4	1121.9	1226.6
J079	chr5	151060395	151062126	TRUE	OK	946.2	0.00703	0.1	0.6352	-0.241	-0.121	927.2	812.6	902.4	1044.6	930.2	1060.1
J080	chr5	151062212	151063612	TRUE	OK	1058.6	0.00756	0.0546	0.5463	-0.291	-0.146	1015.9	909.6	1078.6	1160.2	1024.5	1163.0
J081	chr5	151063747	151064959	TRUE	OK	788.7	0.00326	0.6973	0.9163	0.040	0.020	676.4	650.3	666.2	905.3	871.5	962.3
J082	chr5	151063747	151080879	TRUE	OK	79.8	0.00704	4.318e-07	0.0001767	-0.980	-0.490	91.3	82.2	112.0	67.2	56.6	69.6
J083	chr5	151063747	151087084	TRUE	OK	9.6	0.0104	2.141e-12	2.988e-09	5.450	2.725	0.9	0.0	0.0	16.8	21.0	19.2
J084	chr5	151065131	151080323	TRUE	OK	5.0	0.0225	0.082	0.6063	-1.018	-0.509	8.5	5.9	3.3	4.0	3.1	5.0
J085	chr5	151065131	151080879	TRUE	OK	408.5	0.021	0.02016	0.3884	-0.568	-0.284	383.8	489.0	406.8	470.4	297.5	403.5
J086	chr5	151065131	151087084	TRUE	OK	128.7	0.0264	2.471e-35	2.362e-31	4.542	2.271	5.1	11.9	7.8	288.6	193.8	265.3
J087	chr5	151065131	151087590	FALSE	LOW_COUNTS_INDEP_FILTER	0.2	0.531	0.6722	NA	NA	NA	0.0	0.0	0.0	0.0	0.0	1.0
J088	chr5	151065131	151093437	TRUE	OK	9.0	0.0148	0.9738	0.9944	0.012	0.006	10.2	6.9	5.5	10.9	7.3	13.1
J089	chr5	151078443	151080072	FALSE	ALL_ZERO	0.0	NA	NA	NA	NA	NA	0.0	0.0	0.0	0.0	0.0	0.0
J090	chr5	151080359	151080879	TRUE	OK	6.1	0.0691	0.8071	0.9496	-0.187	-0.094	9.4	4.9	2.2	5.9	4.2	10.1

Color Codes
NO TEST	p > 0.05	p < 0.05	p < 0.005	p < 5e-04	p < 5e-05

Gene ENSG00000145901.15
expr	exprTX	normCt	normCtTX	rExpr	rExprTX	rawCt	rawCtTX
PLOT	PLOT	PLOT	PLOT	PLOT	PLOT	PLOT	PLOT
TABLE	TABLE	TABLE	TABLE	TABLE	TABLE	TABLE	TABLE