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Normalized Counts Table (ENSG00000134333.14)

binID	chr	start	end	testable	status	baseMean	dispersion	pvalue	padjust	log2FC (mutant/control)	log2FCvst (mutant/control)	Normalized Coverage Counts
												MCF10A-parental-DMSO-1	MCF10A-parental-DMSO-2	MCF10A-parental-DMSO-3	MCF10A-KI-DMSO-7	MCF10A-KI-DMSO-8	MCF10A-KI-DMSO-9
E001	chr11	18394559	18394560	TRUE	OK	58.3	0.00606	0.01768	0.3697	-0.483	-0.242	65.7	75.2	48.8	56.3	50.3	53.5
E002	chr11	18394560	18394561	TRUE	OK	60.6	0.00516	0.01212	0.3137	-0.487	-0.244	68.2	77.2	52.1	59.3	52.4	54.5
E003	chr11	18394561	18394562	TRUE	OK	61.0	0.00475	0.01082	0.2984	-0.486	-0.243	68.2	77.2	53.2	59.3	52.4	55.5
E004	chr11	18394562	18394585	TRUE	OK	4504.3	0.0108	0.01686	0.3627	-0.398	-0.199	4707.5	4663.0	4886.5	4878.2	3281.9	4608.8
E005	chr11	18394585	18394611	TRUE	OK	13001.0	0.0123	0.05423	0.5451	-0.335	-0.168	13350.7	13278.2	13489.9	14649.3	9644.6	13593.3
E006	chr11	18394611	18394636	TRUE	OK	15848.8	0.0122	0.08026	0.603	-0.302	-0.151	16100.7	16134.8	16078.3	18104.4	11982.6	16692.0
E007	chr11	18394636	18394641	TRUE	OK	15.8	0.0109	0.444	0.8274	-0.261	-0.131	13.6	18.8	15.5	12.8	13.6	20.2
E008	chr11	18394641	18394703	TRUE	OK	3.6	0.107	0.1322	0.6722	1.266	0.633	4.3	0.0	1.1	7.9	5.2	3.0
E009	chr11	18394703	18394886	TRUE	OK	6.8	0.0348	0.1048	0.6415	0.940	0.470	5.1	4.0	3.3	14.8	6.3	7.1
E010	chr11	18395123	18395273	FALSE	LOW_COUNTS_INDEP_FILTER	2.8	0.0461	0.3923	NA	NA	NA	4.3	2.0	3.3	3.0	3.1	1.0
E011	chr11	18396265	18396277	FALSE	LOW_COUNTS_INDEP_FILTER	2.9	0.149	0.6989	NA	NA	NA	3.4	1.0	2.2	7.9	2.1	1.0
E012	chr11	18396277	18396479	TRUE	OK	34.4	0.00943	0.01264	0.3201	0.663	0.331	21.3	23.8	27.7	44.5	34.6	54.5
E013	chr11	18396479	18396553	TRUE	OK	40.6	0.00773	0.02196	0.4025	0.554	0.277	28.1	29.7	32.1	50.4	40.9	62.5
E014	chr11	18396553	18396610	TRUE	OK	39.4	0.00504	0.04062	0.5006	0.461	0.231	28.1	31.7	31.0	49.4	41.9	54.5
E015	chr11	18396610	18396817	TRUE	OK	16.9	0.0505	0.1811	0.7114	-0.587	-0.293	14.5	20.8	22.2	19.8	5.2	19.2
E016	chr11	18396817	18396818	TRUE	OK	399.5	0.025	0.1922	0.7187	-0.356	-0.178	301.1	454.3	496.6	372.6	293.3	479.1
E017	chr11	18396818	18396842	TRUE	OK	19921.5	0.0118	0.09125	0.6228	-0.287	-0.144	20103.7	20080.1	20133.4	22744.4	15338.9	21128.3
E018	chr11	18396842	18396954	TRUE	OK	36617.8	0.00765	0.1303	0.6702	-0.212	-0.106	35299.4	35534.9	36758.2	40806.2	31479.2	39828.6
E019	chr11	18396954	18396968	TRUE	OK	32881.4	0.0065	0.119	0.6595	-0.202	-0.101	31896.9	31750.9	32837.3	36502.3	28671.8	35629.4
E020	chr11	18396968	18397398	TRUE	OK	585.0	0.0193	0.6887	0.9139	0.074	0.037	375.3	555.3	643.0	665.1	546.8	724.2
E021	chr11	18398629	18398797	FALSE	LOW_COUNTS_INDEP_FILTER	1.1	0.12	0.8369	NA	NA	NA	1.7	1.0	0.0	2.0	0.0	2.0
E022	chr11	18398797	18398865	TRUE	OK	9.5	0.0725	0.5435	0.8634	-0.395	-0.197	16.2	4.9	8.9	10.9	4.2	12.1
E023	chr11	18398865	18398988	TRUE	OK	9.1	0.0866	0.7084	0.9199	-0.155	-0.078	11.9	7.9	6.7	7.9	3.1	17.1
E024	chr11	18398988	18399430	TRUE	OK	654.0	0.00957	7.083e-07	0.0002669	0.843	0.421	356.5	410.8	502.2	890.4	779.4	984.5
E025	chr11	18399430	18399521	TRUE	OK	40321.3	0.00694	0.0726	0.5887	-0.242	-0.121	40085.4	38985.4	40198.0	44725.8	34937.0	42995.9
E026	chr11	18399521	18399548	TRUE	OK	28660.2	0.00512	0.05589	0.5495	-0.223	-0.111	29195.5	27586.8	27970.8	31629.0	25403.5	30175.3
E027	chr11	18399548	18399725	TRUE	OK	49.0	0.0304	0.3783	0.8016	0.315	0.157	51.2	35.6	32.1	56.3	38.8	79.7
E028	chr11	18399725	18400360	TRUE	OK	101.4	0.0195	0.514	0.853	-0.144	-0.072	109.2	96.0	89.8	98.8	74.4	140.2
E029	chr11	18400360	18400629	TRUE	OK	49.2	0.0389	0.8035	0.9486	-0.095	-0.048	58.9	52.5	28.8	38.5	44.0	72.6
E030	chr11	18400629	18400745	TRUE	OK	39.2	0.0396	0.8454	0.9607	0.020	0.010	54.6	29.7	22.2	42.5	33.5	52.5
E031	chr11	18400745	18400836	TRUE	OK	501.5	0.00464	3.971e-13	6.258e-10	0.924	0.462	278.9	329.6	328.1	729.4	608.6	734.3
E032	chr11	18400836	18400872	TRUE	OK	27630.1	0.00492	0.03055	0.4553	-0.248	-0.124	28423.6	26681.1	27256.9	30325.5	24405.2	28688.5
E033	chr11	18400872	18400906	TRUE	OK	32521.2	0.00547	0.1771	0.7085	-0.163	-0.082	33483.4	31000.6	29868.6	36727.6	29807.3	34239.4
E034	chr11	18400906	18400934	TRUE	OK	33767.7	0.00493	0.2967	0.77	-0.119	-0.059	34002.0	31995.4	30675.6	38460.1	31538.9	35934.0
E035	chr11	18400934	18400935	TRUE	OK	29241.3	0.00503	0.4054	0.8125	-0.095	-0.048	29320.0	27806.6	26075.1	33611.5	27425.2	31209.3
E036	chr11	18400935	18400936	TRUE	OK	29160.0	0.00502	0.4025	0.8112	-0.096	-0.048	29223.6	27740.2	26019.7	33526.5	27338.3	31111.4
E037	chr11	18400936	18401010	TRUE	OK	34703.0	0.00452	0.3482	0.7905	-0.103	-0.051	34830.2	32773.4	31253.2	39513.6	32935.2	36912.5
E038	chr11	18401010	18401025	TRUE	OK	39.4	0.00543	0.4208	0.8186	0.184	0.092	29.0	37.6	35.5	49.4	37.7	47.4
E039	chr11	18402534	18402839	TRUE	OK	217.4	0.00435	5.177e-46	9.104e-42	2.123	1.062	66.5	81.2	66.5	411.1	339.4	339.9
E040	chr11	18402839	18402891	TRUE	OK	30976.6	0.00318	0.824	0.9545	-0.021	-0.011	30565.4	28769.6	26806.8	35094.0	31227.8	33396.1
E041	chr11	18402891	18403013	TRUE	OK	38666.2	0.00127	0.3708	0.799	-0.054	-0.027	37578.5	35933.8	34994.5	42304.5	39990.3	41195.4
E042	chr11	18403693	18403737	TRUE	OK	30175.0	0.000622	0.6611	0.9048	-0.019	-0.009	28773.3	27769.9	27302.3	32839.7	32395.8	31968.8
E043	chr11	18403737	18403759	TRUE	OK	27157.2	0.000587	0.844	0.9603	0.008	0.004	25642.0	24877.7	24313.7	29802.7	29371.5	28935.6
E044	chr11	18403759	18403784	TRUE	OK	29713.6	0.00035	0.8479	0.9614	0.006	0.003	27718.2	27489.8	26720.3	32505.6	32057.4	31790.3
E045	chr11	18403784	18403788	TRUE	OK	26247.1	0.000611	0.5048	0.8495	0.028	0.014	24556.2	24140.3	23169.7	28910.3	28555.5	28150.9
E046	chr11	18403788	18403811	TRUE	OK	29671.5	0.000689	0.2806	0.7629	0.047	0.024	27564.6	27247.3	25938.8	32710.2	32608.4	31959.7
E047	chr11	18405448	18405495	TRUE	OK	31827.2	0.000729	0.1021	0.6378	0.074	0.037	29350.7	28916.1	27644.8	35488.3	35328.8	34234.4
E048	chr11	18405495	18405572	TRUE	OK	35546.0	0.000965	0.1053	0.6423	0.084	0.042	32743.0	32195.3	30765.4	39680.6	39970.4	37921.2
E049	chr11	18405572	18405574	TRUE	OK	351.0	0.00301	5.11e-05	0.009043	0.454	0.227	264.4	290.0	253.9	453.6	460.9	383.3
E050	chr11	18407116	18407158	TRUE	OK	28147.9	0.00152	0.1385	0.6779	0.097	0.048	25944.8	25482.5	23953.4	31764.4	32102.4	29639.7
E051	chr11	18407158	18407238	TRUE	OK	33092.5	0.00191	0.2447	0.7472	0.085	0.043	31016.6	29629.8	28388.7	37702.0	37378.8	34439.1
E052	chr11	18407238	18407281	TRUE	OK	29903.9	0.00271	0.2408	0.7456	0.102	0.051	28338.3	26507.9	25135.1	34804.4	33582.6	31054.9
E053	chr11	18407281	18407584	TRUE	OK	64364.3	0.005	0.1596	0.6959	0.168	0.084	58961.6	56292.1	55354.0	70914.3	78178.9	66484.6
E054	chr11	18407584	18407642	TRUE	OK	27416.6	0.00305	0.6914	0.9146	-0.034	-0.017	26498.4	25308.3	24753.8	29608.0	31542.0	26789.1
E055	chr11	18407642	18407667	TRUE	OK	18857.1	0.00338	0.5581	0.8688	-0.056	-0.028	18684.3	17991.7	16402.0	20510.8	21216.6	18337.2
E056	chr11	18407667	18407740	TRUE	OK	18650.6	0.00328	0.4691	0.8365	-0.068	-0.034	18497.5	17835.3	16373.2	20357.7	20840.5	17999.3
E057	chr11	18407740	18407847	TRUE	OK	10454.1	0.00309	0.01372	0.3324	-0.227	-0.113	10869.4	10280.1	10046.7	11383.1	10714.1	9431.4
E058	chr11	18407847	18408218	TRUE	OK	231.4	0.0075	0.7654	0.9377	-0.040	-0.020	208.1	227.7	212.8	211.5	299.6	229.0
E059	chr11	18408218	18408425	TRUE	OK	85.5	0.00323	0.2341	0.7425	-0.187	-0.094	75.1	92.1	86.5	92.9	88.0	78.7
J060	chr11	18394636	18395123	FALSE	LOW_COUNTS_INDEP_FILTER	0.2	0.5	0.4989	NA	NA	NA	0.0	0.0	1.1	0.0	0.0	0.0
J061	chr11	18394636	18396818	TRUE	OK	15826.4	0.0125	0.08346	0.6091	-0.302	-0.151	16083.6	16110.0	16057.2	18084.6	11965.9	16656.7
J062	chr11	18394641	18396818	TRUE	OK	13.2	0.0223	0.4821	0.8412	-0.284	-0.142	9.4	17.8	13.3	10.9	9.4	18.2
J063	chr11	18394886	18396479	FALSE	LOW_COUNTS_INDEP_FILTER	0.2	0.531	0.6093	NA	NA	NA	0.0	0.0	0.0	0.0	0.0	1.0
J064	chr11	18394886	18396818	FALSE	LOW_COUNTS_INDEP_FILTER	2.5	0.0583	0.656	NA	NA	NA	1.7	2.0	2.2	5.9	1.0	2.0
J065	chr11	18395273	18396818	FALSE	LOW_COUNTS_INDEP_FILTER	0.9	0.119	0.01134	NA	NA	NA	3.4	1.0	1.1	0.0	0.0	0.0
J066	chr11	18396610	18396818	TRUE	OK	21.5	0.00494	0.01707	0.3644	0.683	0.342	14.5	14.8	15.5	27.7	27.2	29.3
J067	chr11	18396954	18400906	FALSE	LOW_COUNTS_INDEP_FILTER	1.6	0.23	0.6019	NA	NA	NA	3.4	0.0	0.0	1.0	2.1	3.0
J068	chr11	18396968	18398797	TRUE	OK	7.0	0.0187	0.06981	0.5824	-0.919	-0.460	11.9	4.9	8.9	5.9	4.2	6.1
J069	chr11	18396968	18399430	TRUE	OK	30413.2	0.00587	0.1052	0.6421	-0.200	-0.100	29744.8	29137.8	30396.3	33633.3	26700.4	32866.6
J070	chr11	18396968	18400836	TRUE	OK	151.0	0.0143	0.1216	0.6617	-0.346	-0.173	122.0	162.3	188.5	150.2	118.4	164.4
J071	chr11	18396968	18402839	FALSE	LOW_COUNTS_INDEP_FILTER	0.8	0.11	0.7734	NA	NA	NA	0.9	1.0	0.0	2.0	0.0	1.0
J072	chr11	18398988	18399430	TRUE	OK	5.1	0.0188	0.426	0.8206	-0.449	-0.225	5.1	5.9	5.5	4.0	3.1	7.1
J073	chr11	18399548	18400629	FALSE	LOW_COUNTS_INDEP_FILTER	0.5	0.842	0.3798	NA	NA	NA	0.0	0.0	0.0	0.0	0.0	3.0
J074	chr11	18399548	18400836	TRUE	OK	23331.9	0.00471	0.01045	0.294	-0.288	-0.144	24254.2	22669.5	23615.3	25161.7	20270.7	24020.2
J075	chr11	18399548	18402839	TRUE	OK	68.4	0.00613	0.07278	0.5891	-0.343	-0.172	75.9	62.4	75.4	76.1	51.3	69.6
J076	chr11	18399548	18403737	TRUE	OK	153.7	0.0037	0.5191	0.8548	0.093	0.047	141.6	126.7	141.9	198.6	160.3	153.3
J077	chr11	18400745	18400836	TRUE	OK	3.5	0.452	0.2498	0.7495	1.320	0.660	5.1	0.0	0.0	10.9	3.1	2.0
J078	chr11	18401010	18402839	TRUE	OK	25215.3	0.00389	0.7469	0.9318	-0.034	-0.017	25184.0	23608.8	21626.6	28732.4	24864.0	27276.3
J079	chr11	18403013	18403693	TRUE	OK	22762.0	0.00033	0.005836	0.2198	-0.087	-0.043	22054.4	21302.6	21308.4	24118.1	24059.6	23728.7
J080	chr11	18403788	18407238	TRUE	OK	44.2	0.0126	0.2192	0.7349	-0.325	-0.163	35.8	60.4	41.0	39.5	39.8	48.4
J081	chr11	18403811	18405448	TRUE	OK	26500.7	0.000494	0.2739	0.7599	0.041	0.020	24727.6	24230.4	23288.3	29246.3	28999.7	28512.0
J082	chr11	18403811	18407116	TRUE	OK	26.8	0.00492	0.8084	0.95	0.064	0.032	23.0	21.8	27.7	33.6	30.4	24.2
J083	chr11	18405572	18407116	TRUE	OK	22616.7	0.00146	0.09566	0.6289	0.107	0.053	20897.8	20418.7	18986.0	25515.5	25900.1	23981.9
N084	chr11	18400429	18400461	TRUE	OK	13.4	0.118	0.1891	0.7166	-0.812	-0.406	21.3	18.8	7.8	7.9	4.2	20.2

Color Codes
NO TEST	p > 0.05	p < 0.05	p < 0.005	p < 5e-04	p < 5e-05

Gene ENSG00000134333.14
expr	exprTX	normCt	normCtTX	rExpr	rExprTX	rawCt	rawCtTX
PLOT	PLOT	PLOT	PLOT	PLOT	PLOT	PLOT	PLOT
TABLE	TABLE	TABLE	TABLE	TABLE	TABLE	TABLE	TABLE