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| binID | chr | start | end | testable | status | baseMean | dispersion | pvalue | padjust | log2FC (mutant/control) | log2FCvst (mutant/control) | Normalized Coverage Counts | |||||
| MCF10A-parental-DMSO-1 | MCF10A-parental-DMSO-2 | MCF10A-parental-DMSO-3 | MCF10A-KI-DMSO-7 | MCF10A-KI-DMSO-8 | MCF10A-KI-DMSO-9 | ||||||||||||
| E001 | chr12 | 106237880 | 106239893 | TRUE | OK | 9797.6 | 0.0141 | 0.4093 | 0.814 | 0.169 | 0.084 | 8690.1 | 8485.6 | 8767.5 | 10044.9 | 12812.3 | 9985.1 |
| E002 | chr12 | 106239893 | 106240321 | TRUE | OK | 3551.1 | 0.0143 | 0.5614 | 0.8701 | -0.121 | -0.060 | 3457.1 | 3304.0 | 3142.7 | 4218.0 | 3337.4 | 3847.2 |
| E003 | chr12 | 106240321 | 106240349 | TRUE | OK | 1253.6 | 0.0198 | 0.1564 | 0.6936 | -0.325 | -0.163 | 1343.4 | 1244.2 | 1176.2 | 1497.3 | 983.6 | 1277.0 |
| E004 | chr12 | 106247368 | 106248020 | TRUE | OK | 2215.4 | 0.0147 | 0.1936 | 0.7194 | -0.265 | -0.132 | 2300.5 | 2083.5 | 2098.5 | 2543.8 | 1914.9 | 2351.3 |
| E005 | chr12 | 106254077 | 106254219 | FALSE | ALL_ZERO | 0.0 | NA | NA | NA | NA | NA | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 |
| E006 | chr12 | 106276414 | 106276549 | FALSE | ALL_ZERO | 0.0 | NA | NA | NA | NA | NA | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 |
| E007 | chr12 | 106304011 | 106304251 | TRUE | OK | 30.6 | 0.0135 | 1.359e-07 | 6.472e-05 | -1.575 | -0.787 | 40.9 | 50.5 | 38.8 | 19.8 | 11.5 | 22.2 |
| E008 | chr12 | 106304251 | 106304279 | FALSE | ALL_ZERO | 0.0 | NA | NA | NA | NA | NA | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 |
| J009 | chr12 | 106240349 | 106247368 | TRUE | OK | 970.1 | 0.0198 | 0.08662 | 0.615 | -0.397 | -0.199 | 1085.8 | 950.2 | 951.1 | 1124.7 | 742.7 | 966.3 |
| J010 | chr12 | 106240349 | 106254077 | FALSE | ALL_ZERO | 0.0 | NA | NA | NA | NA | NA | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 |
| J011 | chr12 | 106240349 | 106276414 | FALSE | ALL_ZERO | 0.0 | NA | NA | NA | NA | NA | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 |
| J012 | chr12 | 106254219 | 106276414 | FALSE | ALL_ZERO | 0.0 | NA | NA | NA | NA | NA | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 |
| J013 | chr12 | 106276549 | 106304011 | FALSE | ALL_ZERO | 0.0 | NA | NA | NA | NA | NA | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 |
| N014 | chr12 | 106302941 | 106311040 | TRUE | OK | 38.1 | 0.00641 | 1.552e-19 | 5.832e-16 | -2.307 | -1.154 | 60.6 | 69.3 | 53.2 | 17.8 | 10.5 | 17.1 |
| N015 | chr12 | 106304231 | 106311040 | TRUE | OK | 16.8 | 0.0159 | 1.827e-05 | 0.003984 | -1.596 | -0.798 | 29.0 | 26.7 | 15.5 | 11.9 | 8.4 | 9.1 |
| Color Codes | |||||
|---|---|---|---|---|---|
| NO TEST | p > 0.05 | p < 0.05 | p < 0.005 | p < 5e-04 | p < 5e-05 |
| Gene ENSG00000136026.14 | |||||||
|---|---|---|---|---|---|---|---|
| expr | exprTX | normCt | normCtTX | rExpr | rExprTX | rawCt | rawCtTX |
| PLOT | PLOT | PLOT | PLOT | PLOT | PLOT | PLOT | PLOT |
| TABLE | TABLE | TABLE | TABLE | TABLE | TABLE | TABLE | TABLE |