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Raw Counts Table (ENSG00000129255.16)

binID	chr	start	end	testable	status	baseMean	dispersion	pvalue	padjust	log2FC (mutant/control)	log2FCvst (mutant/control)	Raw Counts
												MCF10A-parental-DMSO-1	MCF10A-parental-DMSO-2	MCF10A-parental-DMSO-3	MCF10A-KI-DMSO-7	MCF10A-KI-DMSO-8	MCF10A-KI-DMSO-9
E001	chr17	7583528	7583665	TRUE	OK	53.3	0.00609	0.0164	0.3584	-0.503	-0.251	74.0	57.0	51.0	58.0	43.0	41.0
E002	chr17	7583665	7583820	TRUE	OK	61.8	0.0178	0.1085	0.6463	-0.423	-0.211	68.0	66.0	69.0	76.0	49.0	44.0
E003	chr17	7583820	7583827	TRUE	OK	45.0	0.0199	0.2118	0.7304	-0.358	-0.179	47.0	52.0	46.0	58.0	35.0	33.0
E004	chr17	7583827	7583847	TRUE	OK	97.9	0.0108	0.2938	0.7687	-0.216	-0.108	112.0	103.0	88.0	122.0	88.0	79.0
E005	chr17	7583847	7583848	TRUE	OK	96.7	0.0111	0.3103	0.7754	-0.212	-0.106	111.0	102.0	86.0	121.0	86.0	79.0
E006	chr17	7583848	7583851	TRUE	OK	105.2	0.0103	0.2527	0.7506	-0.232	-0.116	126.0	111.0	91.0	129.0	94.0	86.0
E007	chr17	7583851	7583852	TRUE	OK	104.8	0.0105	0.2566	0.7519	-0.232	-0.116	127.0	109.0	91.0	129.0	93.0	86.0
E008	chr17	7583852	7583859	TRUE	OK	118.1	0.00944	0.4179	0.8175	-0.158	-0.079	138.0	119.0	102.0	146.0	106.0	104.0
E009	chr17	7583859	7583861	TRUE	OK	119.0	0.00878	0.3925	0.807	-0.164	-0.082	142.0	121.0	100.0	145.0	108.0	105.0
E010	chr17	7583861	7583864	TRUE	OK	131.4	0.0114	0.4134	0.8157	-0.167	-0.083	157.0	133.0	111.0	164.0	115.0	116.0
E011	chr17	7583864	7583869	TRUE	OK	235.0	0.0109	0.5118	0.8522	-0.124	-0.062	284.0	227.0	196.0	292.0	215.0	210.0
E012	chr17	7583869	7583873	TRUE	OK	294.2	0.0112	0.4282	0.8213	-0.151	-0.076	366.0	280.0	248.0	358.0	264.0	268.0
E013	chr17	7583873	7583874	TRUE	OK	328.5	0.0124	0.5233	0.8563	-0.127	-0.064	411.0	307.0	273.0	403.0	293.0	306.0
E014	chr17	7583874	7583884	TRUE	OK	454.9	0.0123	0.5512	0.8661	-0.122	-0.061	577.0	427.0	367.0	541.0	408.0	442.0
E015	chr17	7583884	7583892	TRUE	OK	555.7	0.011	0.6837	0.9122	-0.082	-0.041	678.0	531.0	441.0	640.0	505.0	575.0
E016	chr17	7583892	7583894	TRUE	OK	568.0	0.011	0.7207	0.924	-0.073	-0.037	690.0	540.0	451.0	657.0	517.0	589.0
E017	chr17	7583894	7583965	TRUE	OK	864.8	0.0107	0.5104	0.8517	-0.125	-0.062	1043.0	827.0	722.0	970.0	779.0	898.0
E018	chr17	7583965	7584256	TRUE	OK	64.7	0.00518	0.6879	0.9135	-0.080	-0.040	68.0	55.0	67.0	74.0	65.0	60.0
E019	chr17	7585694	7585731	TRUE	OK	13.9	0.0138	0.2609	0.7538	0.415	0.208	13.0	12.0	9.0	18.0	12.0	20.0
E020	chr17	7585731	7585797	TRUE	OK	1094.3	0.0072	0.597	0.8824	-0.087	-0.043	1291.0	1034.0	910.0	1168.0	1056.0	1162.0
E021	chr17	7585945	7585950	TRUE	OK	862.6	0.00661	0.7097	0.9203	-0.062	-0.031	1034.0	809.0	695.0	897.0	855.0	932.0
E022	chr17	7585950	7586078	TRUE	OK	1420.5	0.00776	0.454	0.8306	-0.124	-0.062	1707.0	1334.0	1196.0	1539.0	1369.0	1453.0
E023	chr17	7586078	7586180	TRUE	OK	12.8	0.0134	0.1289	0.6687	-0.588	-0.294	17.0	19.0	9.0	11.0	10.0	12.0
E024	chr17	7586180	7586214	TRUE	OK	7.1	0.0241	0.8987	0.9755	-0.068	-0.034	10.0	7.0	4.0	4.0	8.0	10.0
E025	chr17	7586214	7586374	TRUE	OK	9.8	0.0288	0.9515	0.9892	-0.032	-0.016	16.0	7.0	6.0	7.0	15.0	9.0
E026	chr17	7586374	7586438	TRUE	OK	7.4	0.0869	0.8859	0.9722	-0.049	-0.024	13.0	4.0	5.0	6.0	14.0	3.0
E027	chr17	7586438	7586468	TRUE	OK	8.5	0.0812	0.6147	0.8887	-0.225	-0.113	14.0	8.0	5.0	6.0	16.0	3.0
E028	chr17	7586468	7586488	TRUE	OK	9.7	0.0557	0.3398	0.7869	-0.467	-0.234	15.0	12.0	6.0	5.0	16.0	5.0
E029	chr17	7586488	7586655	TRUE	OK	19.6	0.0299	0.6149	0.8887	-0.201	-0.101	25.0	26.0	10.0	13.0	26.0	19.0
E030	chr17	7586655	7586691	TRUE	OK	83.2	0.00318	0.07532	0.5943	0.285	0.142	74.0	68.0	71.0	99.0	97.0	90.0
E031	chr17	7586691	7586746	TRUE	OK	1232.0	0.00615	0.2919	0.7677	-0.153	-0.077	1500.0	1134.0	1074.0	1322.0	1202.0	1223.0
E032	chr17	7586746	7586777	TRUE	OK	1023.4	0.00615	0.4816	0.8411	-0.106	-0.053	1259.0	928.0	862.0	1106.0	1017.0	1025.0
E033	chr17	7586777	7586838	TRUE	OK	214.9	0.00692	0.006983	0.241	-0.448	-0.224	325.0	214.0	185.0	192.0	207.0	187.0
E034	chr17	7586838	7586898	TRUE	OK	40.7	0.00773	0.01205	0.3129	0.596	0.298	34.0	34.0	24.0	47.0	47.0	59.0
E035	chr17	7586898	7586961	TRUE	OK	971.4	0.00646	0.6929	0.915	-0.063	-0.032	1129.0	866.0	851.0	1103.0	959.0	962.0
E036	chr17	7586961	7587017	TRUE	OK	939.7	0.0014	0.1627	0.6981	0.103	0.051	1031.0	798.0	782.0	1019.0	1096.0	939.0
E037	chr17	7587017	7587043	TRUE	OK	8.7	0.0324	0.6009	0.8837	0.247	0.123	12.0	5.0	6.0	13.0	6.0	11.0
E038	chr17	7587043	7587160	TRUE	OK	134.3	0.00329	0.004848	0.1995	0.392	0.196	140.0	106.0	87.0	169.0	163.0	146.0
E039	chr17	7587160	7587169	TRUE	OK	1042.7	0.00237	0.6307	0.8944	-0.046	-0.023	1230.0	914.0	897.0	1089.0	1179.0	988.0
E040	chr17	7587169	7587201	TRUE	OK	1268.0	0.00226	0.4664	0.8355	-0.067	-0.033	1491.0	1117.0	1108.0	1311.0	1415.0	1214.0
E041	chr17	7587201	7587243	TRUE	OK	1398.4	0.00243	0.6151	0.8888	-0.047	-0.024	1613.0	1222.0	1234.0	1467.0	1577.0	1324.0
E042	chr17	7587243	7587258	TRUE	OK	1321.7	0.00272	0.5604	0.8697	-0.056	-0.028	1534.0	1157.0	1166.0	1390.0	1501.0	1227.0
E043	chr17	7587258	7587271	TRUE	OK	1258.6	0.00328	0.7778	0.9414	-0.030	-0.015	1463.0	1071.0	1113.0	1312.0	1451.0	1183.0
E044	chr17	7587425	7587474	TRUE	OK	1412.1	0.00354	0.6274	0.8932	-0.055	-0.027	1665.0	1213.0	1244.0	1484.0	1586.0	1333.0
E045	chr17	7587474	7587542	TRUE	OK	1466.7	0.0033	0.2522	0.7504	-0.122	-0.061	1724.0	1316.0	1316.0	1562.0	1564.0	1374.0
E046	chr17	7587542	7587595	TRUE	OK	1299.8	0.00275	0.3986	0.8095	-0.085	-0.042	1548.0	1179.0	1107.0	1376.0	1405.0	1242.0
E047	chr17	7587595	7587643	TRUE	OK	1294.4	0.000863	0.7896	0.9447	-0.017	-0.009	1458.0	1192.0	1086.0	1346.0	1471.0	1257.0
E048	chr17	7587643	7587681	TRUE	OK	1236.2	0.00136	0.281	0.7631	0.080	0.040	1270.0	1168.0	1017.0	1289.0	1495.0	1200.0
E049	chr17	7587681	7587685	TRUE	OK	985.1	0.00277	0.2875	0.7657	0.110	0.055	982.0	934.0	805.0	980.0	1244.0	976.0
E050	chr17	7587685	7587696	TRUE	OK	1038.0	0.00359	0.2268	0.7388	0.138	0.069	1017.0	990.0	835.0	1035.0	1329.0	1031.0
E051	chr17	7587696	7587790	TRUE	OK	1383.3	0.00367	0.2845	0.7645	0.122	0.061	1368.0	1340.0	1111.0	1403.0	1739.0	1355.0
E052	chr17	7587790	7587817	TRUE	OK	1100.0	0.00398	0.2182	0.7344	0.146	0.073	1068.0	1062.0	876.0	1142.0	1403.0	1059.0
E053	chr17	7587817	7587938	TRUE	OK	1283.0	0.00953	0.06287	0.5669	0.339	0.169	1245.0	1141.0	933.0	1318.0	1859.0	1212.0
E054	chr17	7587938	7587955	TRUE	OK	543.2	0.019	0.01111	0.302	0.654	0.327	525.0	386.0	323.0	560.0	947.0	521.0
E055	chr17	7587955	7588094	TRUE	OK	571.1	0.0197	0.01139	0.3051	0.663	0.331	557.0	395.0	343.0	591.0	999.0	545.0
E056	chr17	7588094	7588176	TRUE	OK	161.1	0.0228	0.1227	0.663	0.475	0.237	172.0	112.0	104.0	161.0	283.0	137.0
E057	chr17	7588176	7588177	TRUE	OK	19.2	0.00878	0.4034	0.8117	0.262	0.131	21.0	17.0	12.0	23.0	27.0	16.0
E058	chr17	7588177	7588187	TRUE	OK	60.8	0.00439	0.0005352	0.05197	-0.655	-0.327	77.0	82.0	57.0	47.0	55.0	50.0
E059	chr17	7588187	7588212	TRUE	OK	97.8	0.00752	0.003113	0.1558	-0.566	-0.283	122.0	132.0	85.0	91.0	83.0	80.0
E060	chr17	7592443	7592494	TRUE	OK	21.6	0.0167	0.3542	0.7929	-0.310	-0.155	20.0	21.0	27.0	26.0	20.0	15.0
E061	chr17	7592494	7592789	TRUE	OK	637.9	0.00152	0.01618	0.3568	-0.200	-0.100	758.0	618.0	577.0	638.0	648.0	615.0
J062	chr17	7583965	7585694	FALSE	LOW_COUNTS_INDEP_FILTER	0.3	0.249	0.942	NA	NA	NA	0.0	0.0	1.0	1.0	0.0	0.0
J063	chr17	7583965	7585731	TRUE	OK	787.4	0.0114	0.5954	0.8819	-0.106	-0.053	959.0	752.0	640.0	874.0	711.0	837.0
J064	chr17	7583965	7586691	TRUE	OK	3.7	0.0252	0.4424	0.8269	-0.517	-0.258	7.0	3.0	3.0	4.0	3.0	3.0
J065	chr17	7585797	7585945	TRUE	OK	841.6	0.00611	0.679	0.9106	-0.066	-0.033	1008.0	790.0	681.0	882.0	834.0	900.0
J066	chr17	7585797	7585950	TRUE	OK	22.0	0.0154	0.6015	0.8839	-0.173	-0.087	21.0	17.0	28.0	25.0	24.0	16.0
J067	chr17	7585797	7586691	TRUE	OK	12.9	0.0525	0.5005	0.8479	0.375	0.187	12.0	10.0	10.0	23.0	7.0	16.0
J068	chr17	7586078	7586655	TRUE	OK	41.9	0.00912	0.6778	0.9103	-0.105	-0.053	38.0	36.0	49.0	45.0	45.0	37.0
J069	chr17	7586078	7586691	TRUE	OK	913.7	0.00511	0.1543	0.6919	-0.188	-0.094	1127.0	872.0	790.0	974.0	883.0	887.0
J070	chr17	7586078	7586898	FALSE	LOW_COUNTS_INDEP_FILTER	1.8	0.0574	0.1259	NA	NA	NA	4.0	1.0	3.0	2.0	0.0	1.0
J071	chr17	7586078	7587160	TRUE	OK	5.1	0.0858	0.7072	0.9196	0.343	0.171	6.0	5.0	2.0	7.0	10.0	1.0
J072	chr17	7586214	7586374	FALSE	ALL_ZERO	0.0	NA	NA	NA	NA	NA	0.0	0.0	0.0	0.0	0.0	0.0
J073	chr17	7586746	7588094	TRUE	OK	4.7	0.0257	0.2541	0.7512	0.703	0.351	2.0	5.0	3.0	6.0	4.0	8.0
J074	chr17	7586777	7586898	TRUE	OK	724.4	0.00579	0.9636	0.9921	-0.015	-0.007	851.0	638.0	607.0	816.0	724.0	745.0
J075	chr17	7586777	7587160	TRUE	OK	31.6	0.00515	0.01379	0.3332	-0.600	-0.300	41.0	40.0	30.0	33.0	23.0	25.0
J076	chr17	7586838	7587160	TRUE	OK	142.2	0.00666	0.0005284	0.05147	-0.600	-0.300	227.0	144.0	131.0	121.0	129.0	116.0
J077	chr17	7587017	7587160	TRUE	OK	687.8	0.00113	0.8825	0.9713	0.010	0.005	769.0	596.0	601.0	727.0	795.0	658.0
J078	chr17	7587017	7587169	TRUE	OK	5.6	0.0176	0.3929	0.8071	0.476	0.238	3.0	4.0	6.0	6.0	8.0	6.0
J079	chr17	7587271	7587425	TRUE	OK	1180.3	0.00331	0.7632	0.9369	-0.034	-0.017	1377.0	996.0	1051.0	1234.0	1348.0	1115.0
J080	chr17	7587271	7592443	FALSE	ALL_ZERO	0.0	NA	NA	NA	NA	NA	0.0	0.0	0.0	0.0	0.0	0.0
N081	chr17	7582531	7583917	TRUE	OK	10.0	0.0119	0.4145	0.8161	0.344	0.172	10.0	6.0	9.0	14.0	14.0	7.0
N082	chr17	7588546	7589143	TRUE	OK	783.4	0.000655	2.445e-27	1.558e-23	-0.676	-0.338	1066.0	860.0	813.0	665.0	717.0	625.0
N083	chr17	7589738	7589986	TRUE	OK	43.5	0.00322	0.1287	0.6685	-0.308	-0.154	55.0	41.0	43.0	44.0	46.0	34.0
N084	chr17	7591925	7592070	TRUE	OK	19.1	0.0117	0.5619	0.8703	-0.186	-0.093	28.0	16.0	15.0	20.0	25.0	12.0
N085	chr17	7591925	7592253	TRUE	OK	288.2	0.00433	0.6555	0.9027	-0.045	-0.023	329.0	273.0	239.0	280.0	372.0	245.0
N086	chr17	7592157	7592253	TRUE	OK	31.6	0.00778	0.4738	0.838	0.178	0.089	34.0	26.0	25.0	35.0	29.0	42.0
N087	chr17	7592354	7592503	TRUE	OK	394.4	0.00183	0.2111	0.7299	-0.122	-0.061	454.0	399.0	328.0	389.0	409.0	404.0
N088	chr17	7592599	7592693	TRUE	OK	301.6	0.00563	0.08475	0.6114	-0.256	-0.128	392.0	305.0	253.0	306.0	277.0	298.0

Color Codes
NO TEST	p > 0.05	p < 0.05	p < 0.005	p < 5e-04	p < 5e-05

Gene ENSG00000129255.16
expr	exprTX	normCt	normCtTX	rExpr	rExprTX	rawCt	rawCtTX
PLOT	PLOT	PLOT	PLOT	PLOT	PLOT	PLOT	PLOT
TABLE	TABLE	TABLE	TABLE	TABLE	TABLE	TABLE	TABLE