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binID | chr | start | end | testable | status | baseMean | dispersion | pvalue | padjust | log2FC (mutant/control) | log2FCvst (mutant/control) | Mean Normalized Coverage Counts | |
control | mutant | ||||||||||||
E001 | chr17 | 7583528 | 7583665 | TRUE | OK | 53.3 | 0.00609 | 0.0164 | 0.3584 | -0.503 | -0.251 | 58.9 | 48.0 |
E002 | chr17 | 7583665 | 7583820 | TRUE | OK | 61.8 | 0.0178 | 0.1085 | 0.6463 | -0.423 | -0.211 | 66.2 | 57.0 |
E003 | chr17 | 7583820 | 7583827 | TRUE | OK | 45.0 | 0.0199 | 0.2118 | 0.7304 | -0.358 | -0.179 | 47.3 | 42.5 |
E004 | chr17 | 7583827 | 7583847 | TRUE | OK | 97.9 | 0.0108 | 0.2938 | 0.7687 | -0.216 | -0.108 | 98.3 | 97.6 |
E005 | chr17 | 7583847 | 7583848 | TRUE | OK | 96.7 | 0.0111 | 0.3103 | 0.7754 | -0.212 | -0.106 | 97.0 | 96.6 |
E006 | chr17 | 7583848 | 7583851 | TRUE | OK | 105.2 | 0.0103 | 0.2527 | 0.7506 | -0.232 | -0.116 | 106.2 | 104.3 |
E007 | chr17 | 7583851 | 7583852 | TRUE | OK | 104.8 | 0.0105 | 0.2566 | 0.7519 | -0.232 | -0.116 | 105.8 | 104.0 |
E008 | chr17 | 7583852 | 7583859 | TRUE | OK | 118.1 | 0.00944 | 0.4179 | 0.8175 | -0.158 | -0.079 | 116.3 | 120.2 |
E009 | chr17 | 7583859 | 7583861 | TRUE | OK | 119.0 | 0.00878 | 0.3925 | 0.807 | -0.164 | -0.082 | 117.5 | 120.9 |
E010 | chr17 | 7583861 | 7583864 | TRUE | OK | 131.4 | 0.0114 | 0.4134 | 0.8157 | -0.167 | -0.083 | 129.7 | 133.3 |
E011 | chr17 | 7583864 | 7583869 | TRUE | OK | 235.0 | 0.0109 | 0.5118 | 0.8522 | -0.124 | -0.062 | 228.4 | 242.0 |
E012 | chr17 | 7583869 | 7583873 | TRUE | OK | 294.2 | 0.0112 | 0.4282 | 0.8213 | -0.151 | -0.076 | 288.5 | 300.4 |
E013 | chr17 | 7583873 | 7583874 | TRUE | OK | 328.5 | 0.0124 | 0.5233 | 0.8563 | -0.127 | -0.064 | 319.5 | 338.1 |
E014 | chr17 | 7583874 | 7583884 | TRUE | OK | 454.9 | 0.0123 | 0.5512 | 0.8661 | -0.122 | -0.061 | 441.1 | 469.4 |
E015 | chr17 | 7583884 | 7583892 | TRUE | OK | 555.7 | 0.011 | 0.6837 | 0.9122 | -0.082 | -0.041 | 531.5 | 580.6 |
E016 | chr17 | 7583892 | 7583894 | TRUE | OK | 568.0 | 0.011 | 0.7207 | 0.924 | -0.073 | -0.037 | 541.5 | 595.1 |
E017 | chr17 | 7583894 | 7583965 | TRUE | OK | 864.8 | 0.0107 | 0.5104 | 0.8517 | -0.125 | -0.062 | 836.6 | 893.6 |
E018 | chr17 | 7583965 | 7584256 | TRUE | OK | 64.7 | 0.00518 | 0.6879 | 0.9135 | -0.080 | -0.040 | 61.7 | 67.3 |
E019 | chr17 | 7585694 | 7585731 | TRUE | OK | 13.9 | 0.0138 | 0.2609 | 0.7538 | 0.415 | 0.208 | 11.0 | 16.9 |
E020 | chr17 | 7585731 | 7585797 | TRUE | OK | 1094.3 | 0.0072 | 0.597 | 0.8824 | -0.087 | -0.043 | 1044.9 | 1144.3 |
E021 | chr17 | 7585945 | 7585950 | TRUE | OK | 862.6 | 0.00661 | 0.7097 | 0.9203 | -0.062 | -0.031 | 818.5 | 907.4 |
E022 | chr17 | 7585950 | 7586078 | TRUE | OK | 1420.5 | 0.00776 | 0.454 | 0.8306 | -0.124 | -0.062 | 1367.9 | 1473.6 |
E023 | chr17 | 7586078 | 7586180 | TRUE | OK | 12.8 | 0.0134 | 0.1289 | 0.6687 | -0.588 | -0.294 | 14.6 | 11.2 |
E024 | chr17 | 7586180 | 7586214 | TRUE | OK | 7.1 | 0.0241 | 0.8987 | 0.9755 | -0.068 | -0.034 | 6.8 | 7.4 |
E025 | chr17 | 7586214 | 7586374 | TRUE | OK | 9.8 | 0.0288 | 0.9515 | 0.9892 | -0.032 | -0.016 | 9.3 | 10.5 |
E026 | chr17 | 7586374 | 7586438 | TRUE | OK | 7.4 | 0.0869 | 0.8859 | 0.9722 | -0.049 | -0.024 | 7.0 | 7.8 |
E027 | chr17 | 7586438 | 7586468 | TRUE | OK | 8.5 | 0.0812 | 0.6147 | 0.8887 | -0.225 | -0.113 | 8.6 | 8.5 |
E028 | chr17 | 7586468 | 7586488 | TRUE | OK | 9.7 | 0.0557 | 0.3398 | 0.7869 | -0.467 | -0.234 | 10.6 | 8.8 |
E029 | chr17 | 7586488 | 7586655 | TRUE | OK | 19.6 | 0.0299 | 0.6149 | 0.8887 | -0.201 | -0.101 | 19.6 | 19.7 |
E030 | chr17 | 7586655 | 7586691 | TRUE | OK | 83.2 | 0.00318 | 0.07532 | 0.5943 | 0.285 | 0.142 | 69.2 | 96.7 |
E031 | chr17 | 7586691 | 7586746 | TRUE | OK | 1232.0 | 0.00615 | 0.2919 | 0.7677 | -0.153 | -0.077 | 1198.0 | 1266.5 |
E032 | chr17 | 7586746 | 7586777 | TRUE | OK | 1023.4 | 0.00615 | 0.4816 | 0.8411 | -0.106 | -0.053 | 983.4 | 1064.1 |
E033 | chr17 | 7586777 | 7586838 | TRUE | OK | 214.9 | 0.00692 | 0.006983 | 0.241 | -0.448 | -0.224 | 232.6 | 198.3 |
E034 | chr17 | 7586838 | 7586898 | TRUE | OK | 40.7 | 0.00773 | 0.01205 | 0.3129 | 0.596 | 0.298 | 29.8 | 51.7 |
E035 | chr17 | 7586898 | 7586961 | TRUE | OK | 971.4 | 0.00646 | 0.6929 | 0.915 | -0.063 | -0.032 | 921.3 | 1021.8 |
E036 | chr17 | 7586961 | 7587017 | TRUE | OK | 939.7 | 0.0014 | 0.1627 | 0.6981 | 0.103 | 0.051 | 845.8 | 1033.4 |
E037 | chr17 | 7587017 | 7587043 | TRUE | OK | 8.7 | 0.0324 | 0.6009 | 0.8837 | 0.247 | 0.123 | 7.4 | 10.1 |
E038 | chr17 | 7587043 | 7587160 | TRUE | OK | 134.3 | 0.00329 | 0.004848 | 0.1995 | 0.392 | 0.196 | 107.7 | 161.6 |
E039 | chr17 | 7587160 | 7587169 | TRUE | OK | 1042.7 | 0.00237 | 0.6307 | 0.8944 | -0.046 | -0.023 | 983.5 | 1102.1 |
E040 | chr17 | 7587169 | 7587201 | TRUE | OK | 1268.0 | 0.00226 | 0.4664 | 0.8355 | -0.067 | -0.033 | 1202.5 | 1333.6 |
E041 | chr17 | 7587201 | 7587243 | TRUE | OK | 1398.4 | 0.00243 | 0.6151 | 0.8888 | -0.047 | -0.024 | 1318.0 | 1478.6 |
E042 | chr17 | 7587243 | 7587258 | TRUE | OK | 1321.7 | 0.00272 | 0.5604 | 0.8697 | -0.056 | -0.028 | 1249.0 | 1394.1 |
E043 | chr17 | 7587258 | 7587271 | TRUE | OK | 1258.6 | 0.00328 | 0.7778 | 0.9414 | -0.030 | -0.015 | 1180.8 | 1336.1 |
E044 | chr17 | 7587425 | 7587474 | TRUE | OK | 1412.1 | 0.00354 | 0.6274 | 0.8932 | -0.055 | -0.027 | 1333.7 | 1490.5 |
E045 | chr17 | 7587474 | 7587542 | TRUE | OK | 1466.7 | 0.0033 | 0.2522 | 0.7504 | -0.122 | -0.061 | 1410.8 | 1522.4 |
E046 | chr17 | 7587542 | 7587595 | TRUE | OK | 1299.8 | 0.00275 | 0.3986 | 0.8095 | -0.085 | -0.042 | 1239.2 | 1361.2 |
E047 | chr17 | 7587595 | 7587643 | TRUE | OK | 1294.4 | 0.000863 | 0.7896 | 0.9447 | -0.017 | -0.009 | 1210.0 | 1378.6 |
E048 | chr17 | 7587643 | 7587681 | TRUE | OK | 1236.2 | 0.00136 | 0.281 | 0.7631 | 0.080 | 0.040 | 1121.4 | 1349.0 |
E049 | chr17 | 7587681 | 7587685 | TRUE | OK | 985.1 | 0.00277 | 0.2875 | 0.7657 | 0.110 | 0.055 | 884.1 | 1084.5 |
E050 | chr17 | 7587685 | 7587696 | TRUE | OK | 1038.0 | 0.00359 | 0.2268 | 0.7388 | 0.138 | 0.069 | 923.7 | 1150.9 |
E051 | chr17 | 7587696 | 7587790 | TRUE | OK | 1383.3 | 0.00367 | 0.2845 | 0.7645 | 0.122 | 0.061 | 1241.0 | 1524.3 |
E052 | chr17 | 7587790 | 7587817 | TRUE | OK | 1100.0 | 0.00398 | 0.2182 | 0.7344 | 0.146 | 0.073 | 977.2 | 1221.5 |
E053 | chr17 | 7587817 | 7587938 | TRUE | OK | 1283.0 | 0.00953 | 0.06287 | 0.5669 | 0.339 | 0.169 | 1075.3 | 1490.3 |
E054 | chr17 | 7587938 | 7587955 | TRUE | OK | 543.2 | 0.019 | 0.01111 | 0.302 | 0.654 | 0.327 | 396.4 | 690.0 |
E055 | chr17 | 7587955 | 7588094 | TRUE | OK | 571.1 | 0.0197 | 0.01139 | 0.3051 | 0.663 | 0.331 | 415.9 | 726.4 |
E056 | chr17 | 7588094 | 7588176 | TRUE | OK | 161.1 | 0.0228 | 0.1227 | 0.663 | 0.475 | 0.237 | 124.7 | 197.6 |
E057 | chr17 | 7588176 | 7588177 | TRUE | OK | 19.2 | 0.00878 | 0.4034 | 0.8117 | 0.262 | 0.131 | 16.2 | 22.3 |
E058 | chr17 | 7588177 | 7588187 | TRUE | OK | 60.8 | 0.00439 | 0.0005352 | 0.05197 | -0.655 | -0.327 | 70.0 | 51.4 |
E059 | chr17 | 7588187 | 7588212 | TRUE | OK | 97.8 | 0.00752 | 0.003113 | 0.1558 | -0.566 | -0.283 | 109.8 | 85.9 |
E060 | chr17 | 7592443 | 7592494 | TRUE | OK | 21.6 | 0.0167 | 0.3542 | 0.7929 | -0.310 | -0.155 | 22.2 | 20.6 |
E061 | chr17 | 7592494 | 7592789 | TRUE | OK | 637.9 | 0.00152 | 0.01618 | 0.3568 | -0.200 | -0.100 | 632.8 | 643.0 |
J062 | chr17 | 7583965 | 7585694 | FALSE | LOW_COUNTS_INDEP_FILTER | 0.3 | 0.249 | 0.942 | NA | NA | NA | NA | NA |
J063 | chr17 | 7583965 | 7585731 | TRUE | OK | 787.4 | 0.0114 | 0.5954 | 0.8819 | -0.106 | -0.053 | 757.8 | 817.7 |
J064 | chr17 | 7583965 | 7586691 | TRUE | OK | 3.7 | 0.0252 | 0.4424 | 0.8269 | -0.517 | -0.258 | 4.2 | 3.4 |
J065 | chr17 | 7585797 | 7585945 | TRUE | OK | 841.6 | 0.00611 | 0.679 | 0.9106 | -0.066 | -0.033 | 799.7 | 884.4 |
J066 | chr17 | 7585797 | 7585950 | TRUE | OK | 22.0 | 0.0154 | 0.6015 | 0.8839 | -0.173 | -0.087 | 21.5 | 22.0 |
J067 | chr17 | 7585797 | 7586691 | TRUE | OK | 12.9 | 0.0525 | 0.5005 | 0.8479 | 0.375 | 0.187 | 10.4 | 15.5 |
J068 | chr17 | 7586078 | 7586655 | TRUE | OK | 41.9 | 0.00912 | 0.6778 | 0.9103 | -0.105 | -0.053 | 40.1 | 42.9 |
J069 | chr17 | 7586078 | 7586691 | TRUE | OK | 913.7 | 0.00511 | 0.1543 | 0.6919 | -0.188 | -0.094 | 900.7 | 927.5 |
J070 | chr17 | 7586078 | 7586898 | FALSE | LOW_COUNTS_INDEP_FILTER | 1.8 | 0.0574 | 0.1259 | NA | NA | NA | NA | NA |
J071 | chr17 | 7586078 | 7587160 | TRUE | OK | 5.1 | 0.0858 | 0.7072 | 0.9196 | 0.343 | 0.171 | 4.2 | 6.1 |
J072 | chr17 | 7586214 | 7586374 | FALSE | ALL_ZERO | 0.0 | NA | NA | NA | NA | NA | NA | NA |
J073 | chr17 | 7586746 | 7588094 | TRUE | OK | 4.7 | 0.0257 | 0.2541 | 0.7512 | 0.703 | 0.351 | 3.2 | 6.1 |
J074 | chr17 | 7586777 | 7586898 | TRUE | OK | 724.4 | 0.00579 | 0.9636 | 0.9921 | -0.015 | -0.007 | 677.3 | 772.2 |
J075 | chr17 | 7586777 | 7587160 | TRUE | OK | 31.6 | 0.00515 | 0.01379 | 0.3332 | -0.600 | -0.300 | 36.0 | 27.4 |
J076 | chr17 | 7586838 | 7587160 | TRUE | OK | 142.2 | 0.00666 | 0.0005284 | 0.05147 | -0.600 | -0.300 | 161.5 | 123.8 |
J077 | chr17 | 7587017 | 7587160 | TRUE | OK | 687.8 | 0.00113 | 0.8825 | 0.9713 | 0.010 | 0.005 | 637.3 | 737.6 |
J078 | chr17 | 7587017 | 7587169 | TRUE | OK | 5.6 | 0.0176 | 0.3929 | 0.8071 | 0.476 | 0.238 | 4.2 | 6.8 |
J079 | chr17 | 7587271 | 7587425 | TRUE | OK | 1180.3 | 0.00331 | 0.7632 | 0.9369 | -0.034 | -0.017 | 1108.7 | 1251.7 |
J080 | chr17 | 7587271 | 7592443 | FALSE | ALL_ZERO | 0.0 | NA | NA | NA | NA | NA | NA | NA |
N081 | chr17 | 7582531 | 7583917 | TRUE | OK | 10.0 | 0.0119 | 0.4145 | 0.8161 | 0.344 | 0.172 | 8.1 | 11.8 |
N082 | chr17 | 7588546 | 7589143 | TRUE | OK | 783.4 | 0.000655 | 2.445e-27 | 1.558e-23 | -0.676 | -0.338 | 887.6 | 678.8 |
N083 | chr17 | 7589738 | 7589986 | TRUE | OK | 43.5 | 0.00322 | 0.1287 | 0.6685 | -0.308 | -0.154 | 45.1 | 41.9 |
N084 | chr17 | 7591925 | 7592070 | TRUE | OK | 19.1 | 0.0117 | 0.5619 | 0.8703 | -0.186 | -0.093 | 19.1 | 19.3 |
N085 | chr17 | 7591925 | 7592253 | TRUE | OK | 288.2 | 0.00433 | 0.6555 | 0.9027 | -0.045 | -0.023 | 272.2 | 304.0 |
N086 | chr17 | 7592157 | 7592253 | TRUE | OK | 31.6 | 0.00778 | 0.4738 | 0.838 | 0.178 | 0.089 | 27.5 | 35.8 |
N087 | chr17 | 7592354 | 7592503 | TRUE | OK | 394.4 | 0.00183 | 0.2111 | 0.7299 | -0.122 | -0.061 | 382.5 | 406.6 |
N088 | chr17 | 7592599 | 7592693 | TRUE | OK | 301.6 | 0.00563 | 0.08475 | 0.6114 | -0.256 | -0.128 | 306.4 | 297.8 |
Color Codes | |||||
---|---|---|---|---|---|
NO TEST | p > 0.05 | p < 0.05 | p < 0.005 | p < 5e-04 | p < 5e-05 |
Gene ENSG00000129255.16 | |||||||
---|---|---|---|---|---|---|---|
expr | exprTX | normCt | normCtTX | rExpr | rExprTX | rawCt | rawCtTX |
PLOT | PLOT | PLOT | PLOT | PLOT | PLOT | PLOT | PLOT |
TABLE | TABLE | TABLE | TABLE | TABLE | TABLE | TABLE | TABLE |