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Normalized Counts Table (ENSG00000120708.17)

binID	chr	start	end	testable	status	baseMean	dispersion	pvalue	padjust	log2FC (mutant/control)	log2FCvst (mutant/control)	Normalized Coverage Counts
												MCF10A-parental-DMSO-1	MCF10A-parental-DMSO-2	MCF10A-parental-DMSO-3	MCF10A-KI-DMSO-7	MCF10A-KI-DMSO-8	MCF10A-KI-DMSO-9
E001	chr5	136028987	136028990	TRUE	OK	335.3	0.0101	0.2908	0.7672	-0.177	-0.089	302.8	258.3	264.9	430.9	306.9	447.9
E002	chr5	136028990	136029138	TRUE	OK	22293.7	0.0145	0.3695	0.7985	-0.155	-0.077	18716.7	17489.8	17944.0	31248.5	19734.3	28629.0
E003	chr5	136029138	136029189	TRUE	OK	23651.3	0.0141	0.3447	0.789	-0.163	-0.081	19953.6	18505.4	19144.5	32922.7	21044.8	30336.7
E004	chr5	136033762	136033861	TRUE	OK	28617.2	0.0121	0.3175	0.7782	-0.164	-0.082	24210.7	22152.8	23283.8	38961.1	26299.2	36795.4
E005	chr5	136044057	136044122	TRUE	OK	24041.2	0.0109	0.3999	0.81	-0.134	-0.067	21114.5	18031.3	18777.6	32677.6	23014.1	30632.3
E006	chr5	136044781	136044870	TRUE	OK	88.8	0.025	0.1674	0.7021	-0.418	-0.209	104.1	79.2	56.5	100.8	74.4	118.0
E007	chr5	136045744	136046334	TRUE	OK	398.4	0.00767	1.094e-12	1.582e-09	1.166	0.583	153.5	171.2	192.9	683.9	510.1	678.9
E008	chr5	136046334	136046440	TRUE	OK	29282.9	0.00655	0.3144	0.777	-0.129	-0.065	24636.4	21731.1	23975.6	37948.1	29759.1	37646.8
E009	chr5	136046440	136046495	TRUE	OK	25503.1	0.00515	0.3401	0.7871	-0.109	-0.055	21222.8	18866.6	20769.7	32542.2	26621.8	32995.7
E010	chr5	136046495	136046556	TRUE	OK	1239.1	0.0125	0.03845	0.4924	-0.394	-0.197	1302.5	1092.7	929.0	1363.8	1160.7	1585.7
E011	chr5	136046556	136046850	TRUE	OK	2094.5	0.0133	0.002129	0.1255	-0.586	-0.293	2260.4	2023.2	1747.1	2227.6	1724.2	2584.3
E012	chr5	136046850	136047015	TRUE	OK	34525.4	0.00817	0.2609	0.7538	-0.158	-0.079	28863.7	26612.8	28235.7	45826.7	33799.4	43814.0
E013	chr5	136047015	136047273	TRUE	OK	282.8	0.0273	0.0002273	0.02867	1.120	0.560	107.5	124.7	144.1	591.0	286.0	443.8
E014	chr5	136047273	136047323	TRUE	OK	20913.0	0.0134	0.2141	0.732	-0.217	-0.108	18172.6	16714.8	17127.0	29117.8	18601.9	25744.1
E015	chr5	136047323	136047352	TRUE	OK	19956.6	0.0123	0.136	0.6754	-0.254	-0.127	17355.4	16207.0	16788.9	27509.9	17779.6	24098.9
E016	chr5	136047352	136047417	TRUE	OK	26580.4	0.00608	0.1297	0.6695	-0.188	-0.094	21672.3	21201.6	22411.4	34927.9	26393.4	32875.6
E017	chr5	136047417	136047420	TRUE	OK	19176.4	0.0028	0.08288	0.6079	-0.150	-0.075	15382.5	15038.1	16109.3	24203.1	20388.0	23937.5
E018	chr5	136047420	136048252	TRUE	OK	262.2	0.00872	0.7259	0.9255	-0.047	-0.023	191.1	216.8	205.1	353.8	249.3	357.1
E019	chr5	136048252	136048349	TRUE	OK	119.5	0.0219	0.006851	0.2385	-0.712	-0.356	116.0	144.5	99.8	116.6	84.8	155.3
E020	chr5	136048349	136049438	TRUE	OK	419.9	0.00645	2.016e-05	0.004293	0.634	0.317	202.2	265.3	251.6	658.2	524.8	617.3
E021	chr5	136049438	136049515	TRUE	OK	28049.7	0.00239	0.1884	0.7162	-0.105	-0.052	21854.0	21733.1	23206.2	35684.0	30621.2	35199.7
E022	chr5	136049515	136049580	TRUE	OK	29665.3	0.00148	0.3183	0.7786	-0.064	-0.032	22296.7	22782.3	24477.7	37046.8	33807.8	37580.2
E023	chr5	136049580	136049807	TRUE	OK	117.0	0.00328	0.4141	0.8159	-0.118	-0.059	88.7	103.9	88.7	128.5	152.9	139.2
E024	chr5	136052906	136053017	TRUE	OK	34463.6	0.00181	0.4207	0.8185	-0.055	-0.027	26777.3	26369.4	27352.2	44092.3	38733.3	43456.9
E025	chr5	136053017	136053119	TRUE	OK	33558.6	0.00351	0.1988	0.7228	-0.122	-0.061	27162.9	26117.9	27067.3	43948.0	35993.0	41062.3
E026	chr5	136053942	136054080	TRUE	OK	33933.1	0.00326	0.101	0.6365	-0.153	-0.076	27980.9	26395.1	27751.3	44007.3	36500.0	40964.4
E027	chr5	136054674	136054715	TRUE	OK	534.8	0.00484	0.001389	0.09622	0.408	0.204	285.7	360.3	375.8	770.9	736.4	679.9
E028	chr5	136054715	136054818	TRUE	OK	33636.6	0.00133	0.01089	0.2992	-0.155	-0.077	27209.8	26055.6	28221.3	42083.1	37877.5	40372.3
E029	chr5	136054818	136054861	TRUE	OK	24752.2	0.000941	0.01798	0.3721	-0.122	-0.061	20103.7	19105.2	20144.4	30885.8	28452.9	29821.3
E030	chr5	136054861	136055189	TRUE	OK	94.5	0.00257	0.002772	0.1458	-0.441	-0.220	79.3	90.1	89.8	106.7	96.4	104.9
E031	chr5	136055189	136055392	TRUE	OK	80.4	0.00874	0.0009146	0.07396	-0.666	-0.333	81.9	81.2	75.4	76.1	64.9	102.9
E032	chr5	136055498	136055679	TRUE	OK	77.1	0.0226	0.03514	0.4777	-0.578	-0.289	86.2	62.4	73.2	89.9	51.3	99.9
E033	chr5	136055679	136055816	TRUE	OK	34333.1	0.000768	0.1382	0.6777	-0.069	-0.034	27291.7	25910.1	27409.8	43132.7	40654.4	41599.9
E034	chr5	136056448	136056530	TRUE	OK	10.7	0.0141	0.644	0.8991	0.197	0.098	7.7	4.9	10.0	12.8	16.8	12.1
E035	chr5	136056664	136056795	TRUE	OK	37092.3	0.000767	0.1556	0.693	0.066	0.033	27968.1	26978.1	27886.5	46731.0	47377.5	45612.5
E036	chr5	136058766	136058848	TRUE	OK	9.9	0.0234	0.07782	0.5988	-0.795	-0.397	6.8	9.9	14.4	11.9	5.2	11.1
E037	chr5	136058848	136058919	TRUE	OK	12.3	0.0153	0.01984	0.3862	-0.922	-0.461	8.5	12.9	18.8	9.9	11.5	12.1
E038	chr5	136058919	136059089	TRUE	OK	416.2	0.00165	4.141e-42	6.068e-38	1.315	0.658	149.3	169.3	180.7	696.7	650.5	650.6
E039	chr5	136059089	136059145	TRUE	OK	29829.0	0.000907	0.2436	0.7467	0.059	0.030	22513.3	21674.7	22551.1	37149.6	38472.4	36612.9
E040	chr5	136059145	136059185	TRUE	OK	28209.0	0.00164	0.09772	0.6322	0.113	0.057	21239.0	20147.5	20407.2	35421.1	37312.8	34726.6
E041	chr5	136059185	136059214	TRUE	OK	24410.2	0.00195	0.3999	0.81	0.063	0.031	18837.9	17537.3	18136.9	30051.7	32239.7	29657.9
E042	chr5	136060833	136060936	TRUE	OK	33014.1	0.00213	0.4286	0.8215	0.062	0.031	25225.8	23824.6	24761.5	40470.2	43946.8	39855.8
E043	chr5	136061189	136061499	TRUE	OK	458.8	0.00163	7.321e-13	1.087e-09	0.646	0.323	275.5	262.3	238.3	661.2	665.2	650.6
E044	chr5	136061499	136061536	TRUE	OK	26071.2	0.00274	0.5111	0.852	0.060	0.030	19884.5	18946.8	19470.4	31695.3	35349.8	31080.1
E045	chr5	136061536	136061579	TRUE	OK	24982.7	0.00259	0.6302	0.8943	0.043	0.021	19117.6	18146.1	18968.3	30354.2	33665.4	29644.8
E046	chr5	136062662	136062687	TRUE	OK	24416.1	0.00269	0.9734	0.9943	-0.001	-0.000	18867.7	17950.1	19085.8	29196.9	32704.8	28691.5
E047	chr5	136063185	136063372	TRUE	OK	43874.3	0.00406	0.5784	0.8761	0.062	0.031	33140.5	31630.2	33428.1	53196.4	60556.4	51294.5
E048	chr5	136063372	136063665	TRUE	OK	56858.5	0.0112	0.1078	0.6454	0.294	0.147	40192.9	39733.7	37594.0	68714.4	87928.2	66987.9
E049	chr5	136063665	136063803	TRUE	OK	17856.6	0.0127	0.07959	0.602	0.347	0.173	12453.4	12065.7	10849.3	21461.6	29459.5	20849.9
E050	chr5	136063803	136063815	TRUE	OK	1947.6	0.0141	0.2119	0.7305	0.280	0.140	1325.5	1324.4	1290.3	2256.3	3339.5	2149.5
E051	chr5	136063815	136063816	TRUE	OK	219.9	0.00202	0.6066	0.8859	0.059	0.030	168.9	153.4	168.5	298.5	267.1	263.3
E052	chr5	136063816	136063818	TRUE	OK	215.2	0.00168	0.7558	0.9347	0.035	0.017	165.5	150.5	169.6	281.7	261.9	262.3
J053	chr5	136029189	136033762	TRUE	OK	19420.1	0.0139	0.2545	0.7512	-0.200	-0.100	16554.5	15519.1	15950.8	26692.6	17111.3	24692.0
J054	chr5	136033861	136044057	TRUE	OK	16828.0	0.0129	0.2534	0.7509	-0.198	-0.099	15041.3	12923.9	13653.9	23104.1	15276.1	20968.9
J055	chr5	136044122	136044781	TRUE	OK	50.3	0.0262	0.09385	0.6261	-0.566	-0.283	67.4	42.6	33.3	53.4	44.0	61.5
J056	chr5	136044122	136046334	TRUE	OK	18142.4	0.00765	0.4319	0.8227	-0.108	-0.054	15670.8	13272.3	14380.0	23811.7	18247.9	23471.5
J057	chr5	136044870	136046334	TRUE	OK	63.8	0.0159	0.1749	0.7068	-0.345	-0.172	65.7	57.4	44.3	74.1	53.4	87.8
J058	chr5	136046495	136046850	TRUE	OK	19950.0	0.00441	0.3313	0.7839	-0.103	-0.052	16489.6	14740.2	16316.6	25488.8	20981.9	25682.6
J059	chr5	136046556	136046850	TRUE	OK	14.7	0.00918	0.8527	0.9629	0.062	0.031	15.4	8.9	7.8	16.8	21.0	18.2
J060	chr5	136047015	136047273	TRUE	OK	16883.7	0.0135	0.2329	0.7418	-0.208	-0.104	14624.2	13545.5	13743.7	23502.4	14997.4	20889.2
J061	chr5	136047420	136048252	TRUE	OK	49.2	0.00504	0.000156	0.02151	-0.773	-0.386	48.6	58.4	44.3	49.4	38.8	55.5
J062	chr5	136047420	136049438	TRUE	OK	18734.0	0.00247	0.05824	0.5554	-0.154	-0.077	15025.1	14683.7	15834.4	23521.2	19961.6	23377.7
J063	chr5	136048349	136049438	TRUE	OK	79.1	0.00848	0.001298	0.09233	-0.654	-0.327	74.2	95.0	64.3	84.0	69.1	87.8
J064	chr5	136049580	136052906	TRUE	OK	23389.0	0.0011	0.2911	0.7674	-0.059	-0.030	17451.8	17882.8	19450.5	28815.4	27076.4	29656.9
J065	chr5	136049580	136053017	FALSE	LOW_COUNTS_INDEP_FILTER	2.5	0.0349	0.5831	NA	NA	NA	2.6	1.0	3.3	3.0	2.1	3.0
J066	chr5	136053119	136053942	TRUE	OK	20475.0	0.00508	0.1409	0.6801	-0.168	-0.084	17355.4	16066.5	16589.3	27138.3	21019.6	24680.9
J067	chr5	136054080	136054674	TRUE	OK	96.3	0.00265	0.0007865	0.06691	-0.496	-0.248	100.7	87.1	79.8	103.8	95.3	111.0
J068	chr5	136054080	136054715	TRUE	OK	21490.3	0.00171	0.004899	0.2004	-0.194	-0.097	17752.0	16773.2	18463.9	26972.2	23570.4	25410.2
J069	chr5	136054861	136055679	TRUE	OK	19552.4	0.000689	0.002184	0.1274	-0.136	-0.068	16006.0	15130.1	16058.4	24113.1	22424.4	23582.5
J070	chr5	136055816	136056448	FALSE	LOW_COUNTS_INDEP_FILTER	1.8	0.0467	0.03347	NA	NA	NA	0.9	0.0	0.0	3.0	3.1	4.0
J071	chr5	136055816	136056664	TRUE	OK	20025.6	0.000769	0.9802	0.996	-0.001	-0.001	15715.1	14738.2	15401.0	25435.5	24631.5	24232.1
J072	chr5	136056530	136056664	TRUE	OK	3.9	0.0299	0.103	0.6388	1.215	0.607	2.6	0.0	2.2	4.0	8.4	6.1
J073	chr5	136056795	136059089	TRUE	OK	24665.4	0.000527	0.2504	0.7497	0.045	0.023	18673.2	18110.4	18683.4	30892.8	31404.8	30227.8
J074	chr5	136058919	136059089	FALSE	LOW_COUNTS_INDEP_FILTER	3.0	0.0348	0.3899	NA	NA	NA	1.7	4.0	3.3	2.0	5.2	2.0
J075	chr5	136059214	136060833	TRUE	OK	22420.7	0.00178	0.5526	0.8666	0.043	0.021	17423.6	16195.2	16842.1	27375.5	29553.8	27134.1
J076	chr5	136060936	136061499	TRUE	OK	19923.5	0.00194	0.6208	0.8908	0.038	0.019	15412.3	14562.0	14944.3	24633.0	26381.9	23607.7
J077	chr5	136060936	136063185	TRUE	OK	3.2	0.0269	0.2744	0.7602	0.849	0.424	1.7	1.0	2.2	4.0	5.2	5.0
J078	chr5	136061579	136062662	TRUE	OK	21863.6	0.00277	0.7593	0.9357	0.030	0.015	16592.0	15970.5	16896.4	26007.7	29781.1	25933.7
J079	chr5	136061579	136063185	TRUE	OK	16.6	0.0189	0.2779	0.7618	-0.404	-0.202	17.1	8.9	18.8	18.8	23.0	13.1
J080	chr5	136062687	136063185	TRUE	OK	21501.6	0.00234	0.8678	0.9671	-0.012	-0.006	16687.5	15842.8	16909.7	25844.6	28616.3	25108.6
N081	chr5	136028348	136033762	TRUE	OK	22.1	0.0056	4.025e-09	2.832e-06	-1.671	-0.836	25.6	32.7	29.9	16.8	11.5	16.1
N082	chr5	136033861	136043588	TRUE	OK	8.8	0.141	0.299	0.771	-0.613	-0.306	6.0	9.9	10.0	15.8	1.0	10.1
N083	chr5	136047015	136049438	TRUE	OK	26.5	0.00799	7.406e-07	0.0002773	-1.352	-0.676	29.9	35.6	32.1	28.7	17.8	15.1
N084	chr5	136049580	136050387	TRUE	OK	10.5	0.0608	0.4834	0.8417	-0.366	-0.183	5.1	12.9	10.0	8.9	18.9	7.1
N085	chr5	136054035	136054715	TRUE	OK	31.8	0.00399	0.2701	0.7582	-0.258	-0.129	26.4	23.8	31.0	40.5	34.6	34.3
N086	chr5	136054861	136055268	TRUE	OK	23.1	0.0285	0.9243	0.9822	-0.003	-0.002	16.2	15.8	21.1	17.8	26.2	41.4
N087	chr5	136060845	136061499	TRUE	OK	10.3	0.0131	0.672	0.9083	0.185	0.092	4.3	6.9	11.1	13.8	15.7	10.1
N088	chr5	136062687	136065110	TRUE	OK	15.9	0.00658	0.827	0.9554	0.075	0.038	11.1	10.9	13.3	17.8	19.9	22.2

Color Codes
NO TEST	p > 0.05	p < 0.05	p < 0.005	p < 5e-04	p < 5e-05

Gene ENSG00000120708.17
expr	exprTX	normCt	normCtTX	rExpr	rExprTX	rawCt	rawCtTX
PLOT	PLOT	PLOT	PLOT	PLOT	PLOT	PLOT	PLOT
TABLE	TABLE	TABLE	TABLE	TABLE	TABLE	TABLE	TABLE