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binID | chr | start | end | testable | status | baseMean | dispersion | pvalue | padjust | log2FC (mutant/control) | log2FCvst (mutant/control) | Normalized Coverage Counts | |||||
MCF10A-parental-DMSO-1 | MCF10A-parental-DMSO-2 | MCF10A-parental-DMSO-3 | MCF10A-KI-DMSO-7 | MCF10A-KI-DMSO-8 | MCF10A-KI-DMSO-9 | ||||||||||||
E001 | chr10 | 125823545 | 125823609 | TRUE | OK | 895.7 | 0.00432 | 0.2121 | 0.7307 | 0.138 | 0.069 | 795.8 | 807.7 | 699.5 | 985.3 | 1039.1 | 1047.0 |
E002 | chr10 | 125823609 | 125823722 | TRUE | OK | 2185.5 | 0.00253 | 0.09032 | 0.6211 | 0.145 | 0.072 | 1874.0 | 1964.8 | 1808.0 | 2327.4 | 2620.9 | 2517.7 |
E003 | chr10 | 125825493 | 125826590 | TRUE | OK | 39.1 | 0.00594 | 8.21e-05 | 0.01311 | 0.937 | 0.468 | 17.9 | 30.7 | 22.2 | 50.4 | 66.0 | 47.4 |
E004 | chr10 | 125826590 | 125826665 | TRUE | OK | 2482.0 | 0.00251 | 0.2672 | 0.757 | 0.092 | 0.046 | 2190.4 | 2189.4 | 2147.2 | 2646.6 | 2910.0 | 2808.2 |
E005 | chr10 | 125827557 | 125827638 | TRUE | OK | 2473.5 | 0.00268 | 0.3722 | 0.7996 | 0.075 | 0.037 | 2224.5 | 2173.6 | 2139.5 | 2652.6 | 2884.9 | 2765.9 |
E006 | chr10 | 125830561 | 125830651 | TRUE | OK | 2589.0 | 0.00232 | 0.4607 | 0.8333 | -0.068 | -0.034 | 2402.0 | 2315.2 | 2417.7 | 2725.7 | 2948.8 | 2724.5 |
E007 | chr10 | 125831419 | 125831537 | TRUE | OK | 2593.3 | 0.00369 | 0.7766 | 0.941 | -0.036 | -0.018 | 2402.0 | 2237.0 | 2444.3 | 2760.3 | 2940.4 | 2775.9 |
E008 | chr10 | 125831537 | 125831607 | TRUE | OK | 2193.7 | 0.00229 | 0.5377 | 0.8614 | -0.057 | -0.028 | 1999.4 | 1925.2 | 2107.3 | 2253.3 | 2535.0 | 2342.2 |
E009 | chr10 | 125831607 | 125831650 | TRUE | OK | 49.1 | 0.0113 | 0.03338 | 0.4692 | 0.522 | 0.261 | 28.1 | 33.7 | 46.6 | 61.3 | 57.6 | 67.6 |
E010 | chr10 | 125833771 | 125833946 | TRUE | OK | 4003.1 | 0.000807 | 0.9451 | 0.9875 | 0.003 | 0.002 | 3589.3 | 3561.3 | 3660.4 | 4173.5 | 4906.6 | 4127.6 |
E011 | chr10 | 125836103 | 125836551 | TRUE | OK | 3413.1 | 0.00661 | 0.4271 | 0.8209 | 0.128 | 0.064 | 3012.7 | 3009.0 | 2895.5 | 3481.7 | 4790.3 | 3289.4 |
E012 | chr10 | 125841254 | 125841330 | TRUE | OK | 527.3 | 0.00317 | 0.8296 | 0.9561 | 0.018 | 0.009 | 470.0 | 490.0 | 455.6 | 604.8 | 592.9 | 550.8 |
E013 | chr10 | 125841330 | 125842805 | TRUE | OK | 1855.6 | 0.00249 | 2.998e-05 | 0.005899 | -0.375 | -0.187 | 1844.1 | 1917.2 | 1850.2 | 1828.3 | 1895.0 | 1798.5 |
E014 | chr10 | 125853124 | 125853695 | TRUE | OK | 222.1 | 0.00566 | 0.1329 | 0.673 | 0.227 | 0.114 | 205.6 | 163.3 | 179.6 | 247.1 | 317.4 | 219.9 |
J015 | chr10 | 125823722 | 125826590 | TRUE | OK | 1841.6 | 0.00203 | 0.09284 | 0.6252 | 0.132 | 0.066 | 1612.1 | 1625.3 | 1532.0 | 1951.9 | 2210.3 | 2118.3 |
J016 | chr10 | 125826665 | 125827557 | TRUE | OK | 2010.8 | 0.00219 | 0.5658 | 0.8717 | 0.043 | 0.021 | 1822.8 | 1757.9 | 1781.4 | 2130.7 | 2333.9 | 2238.3 |
J017 | chr10 | 125827638 | 125830561 | TRUE | OK | 1710.3 | 0.00167 | 0.8343 | 0.9576 | -0.021 | -0.010 | 1544.7 | 1561.9 | 1546.4 | 1819.4 | 1948.4 | 1840.9 |
J018 | chr10 | 125827638 | 125831419 | TRUE | OK | 3.4 | 0.113 | 0.4206 | 0.8185 | 0.647 | 0.324 | 1.7 | 0.0 | 5.5 | 4.0 | 3.1 | 6.1 |
J019 | chr10 | 125830651 | 125831419 | TRUE | OK | 1433.3 | 0.00258 | 0.3041 | 0.7727 | -0.099 | -0.049 | 1394.6 | 1258.0 | 1346.9 | 1506.1 | 1622.6 | 1471.7 |
J020 | chr10 | 125831607 | 125833771 | TRUE | OK | 1759.0 | 0.00156 | 0.2331 | 0.7419 | -0.090 | -0.045 | 1638.6 | 1566.9 | 1686.1 | 1782.9 | 2020.7 | 1859.0 |
J021 | chr10 | 125833946 | 125836103 | TRUE | OK | 1854.1 | 0.00196 | 0.9583 | 0.9908 | 0.002 | 0.001 | 1682.9 | 1649.0 | 1675.0 | 1925.2 | 2403.0 | 1789.4 |
J022 | chr10 | 125833946 | 125841254 | TRUE | OK | 410.6 | 0.00181 | 0.5473 | 0.8648 | 0.052 | 0.026 | 350.6 | 362.3 | 376.9 | 455.6 | 468.2 | 449.9 |
J023 | chr10 | 125841330 | 125853124 | TRUE | OK | 143.2 | 0.00447 | 0.2645 | 0.7557 | 0.163 | 0.082 | 136.5 | 102.9 | 123.0 | 165.0 | 186.5 | 145.3 |
N024 | chr10 | 125833946 | 125836106 | TRUE | OK | 27.4 | 0.00545 | 0.735 | 0.9281 | 0.091 | 0.045 | 19.6 | 26.7 | 25.5 | 29.6 | 39.8 | 23.2 |
N025 | chr10 | 125836855 | 125838205 | TRUE | OK | 469.5 | 0.00536 | 1.332e-07 | 6.37e-05 | -0.707 | -0.354 | 524.6 | 486.0 | 587.5 | 416.1 | 465.1 | 337.9 |
N026 | chr10 | 125838387 | 125839000 | TRUE | OK | 456.2 | 0.00407 | 8.486e-10 | 7.106e-07 | -0.744 | -0.372 | 531.4 | 479.1 | 558.7 | 407.2 | 410.6 | 350.0 |
N027 | chr10 | 125839188 | 125840846 | TRUE | OK | 390.7 | 0.0011 | 1.046e-27 | 6.968e-24 | -0.904 | -0.452 | 461.5 | 455.3 | 490.0 | 293.5 | 331.0 | 312.7 |
N028 | chr10 | 125840996 | 125841742 | TRUE | OK | 422.8 | 0.00299 | 2.542e-17 | 7.402e-14 | -0.927 | -0.463 | 510.9 | 504.8 | 514.4 | 352.8 | 332.1 | 321.8 |
N029 | chr10 | 125841934 | 125852292 | TRUE | OK | 385.8 | 0.0031 | 4.221e-18 | 1.354e-14 | -0.975 | -0.487 | 492.2 | 444.4 | 477.8 | 281.7 | 303.8 | 314.7 |
N030 | chr10 | 125852451 | 125852542 | TRUE | OK | 583.1 | 0.0078 | 8.94e-10 | 7.386e-07 | -0.964 | -0.482 | 730.1 | 733.4 | 658.5 | 476.4 | 421.1 | 479.1 |
N031 | chr10 | 125852642 | 125853960 | TRUE | OK | 541.7 | 0.0162 | 6.298e-06 | 0.001693 | -0.989 | -0.495 | 707.1 | 654.3 | 625.2 | 443.7 | 346.7 | 473.1 |
Color Codes | |||||
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NO TEST | p > 0.05 | p < 0.05 | p < 0.005 | p < 5e-04 | p < 5e-05 |
Gene ENSG00000107949.17 | |||||||
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expr | exprTX | normCt | normCtTX | rExpr | rExprTX | rawCt | rawCtTX |
PLOT | PLOT | PLOT | PLOT | PLOT | PLOT | PLOT | PLOT |
TABLE | TABLE | TABLE | TABLE | TABLE | TABLE | TABLE | TABLE |