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binID | chr | start | end | testable | status | baseMean | dispersion | pvalue | padjust | log2FC (mutant/control) | log2FCvst (mutant/control) | Raw Counts | |||||
MCF10A-parental-DMSO-1 | MCF10A-parental-DMSO-2 | MCF10A-parental-DMSO-3 | MCF10A-KI-DMSO-7 | MCF10A-KI-DMSO-8 | MCF10A-KI-DMSO-9 | ||||||||||||
E001 | chr10 | 125823545 | 125823609 | TRUE | OK | 895.7 | 0.00432 | 0.2121 | 0.7307 | 0.138 | 0.069 | 933.0 | 816.0 | 631.0 | 997.0 | 992.0 | 1038.0 |
E002 | chr10 | 125823609 | 125823722 | TRUE | OK | 2185.5 | 0.00253 | 0.09032 | 0.6211 | 0.145 | 0.072 | 2197.0 | 1985.0 | 1631.0 | 2355.0 | 2502.0 | 2496.0 |
E003 | chr10 | 125825493 | 125826590 | TRUE | OK | 39.1 | 0.00594 | 8.21e-05 | 0.01311 | 0.937 | 0.468 | 21.0 | 31.0 | 20.0 | 51.0 | 63.0 | 47.0 |
E004 | chr10 | 125826590 | 125826665 | TRUE | OK | 2482.0 | 0.00251 | 0.2672 | 0.757 | 0.092 | 0.046 | 2568.0 | 2212.0 | 1937.0 | 2678.0 | 2778.0 | 2784.0 |
E005 | chr10 | 125827557 | 125827638 | TRUE | OK | 2473.5 | 0.00268 | 0.3722 | 0.7996 | 0.075 | 0.037 | 2608.0 | 2196.0 | 1930.0 | 2684.0 | 2754.0 | 2742.0 |
E006 | chr10 | 125830561 | 125830651 | TRUE | OK | 2589.0 | 0.00232 | 0.4607 | 0.8333 | -0.068 | -0.034 | 2816.0 | 2339.0 | 2181.0 | 2758.0 | 2815.0 | 2701.0 |
E007 | chr10 | 125831419 | 125831537 | TRUE | OK | 2593.3 | 0.00369 | 0.7766 | 0.941 | -0.036 | -0.018 | 2816.0 | 2260.0 | 2205.0 | 2793.0 | 2807.0 | 2752.0 |
E008 | chr10 | 125831537 | 125831607 | TRUE | OK | 2193.7 | 0.00229 | 0.5377 | 0.8614 | -0.057 | -0.028 | 2344.0 | 1945.0 | 1901.0 | 2280.0 | 2420.0 | 2322.0 |
E009 | chr10 | 125831607 | 125831650 | TRUE | OK | 49.1 | 0.0113 | 0.03338 | 0.4692 | 0.522 | 0.261 | 33.0 | 34.0 | 42.0 | 62.0 | 55.0 | 67.0 |
E010 | chr10 | 125833771 | 125833946 | TRUE | OK | 4003.1 | 0.000807 | 0.9451 | 0.9875 | 0.003 | 0.002 | 4208.0 | 3598.0 | 3302.0 | 4223.0 | 4684.0 | 4092.0 |
E011 | chr10 | 125836103 | 125836551 | TRUE | OK | 3413.1 | 0.00661 | 0.4271 | 0.8209 | 0.128 | 0.064 | 3532.0 | 3040.0 | 2612.0 | 3523.0 | 4573.0 | 3261.0 |
E012 | chr10 | 125841254 | 125841330 | TRUE | OK | 527.3 | 0.00317 | 0.8296 | 0.9561 | 0.018 | 0.009 | 551.0 | 495.0 | 411.0 | 612.0 | 566.0 | 546.0 |
E013 | chr10 | 125841330 | 125842805 | TRUE | OK | 1855.6 | 0.00249 | 2.998e-05 | 0.005899 | -0.375 | -0.187 | 2162.0 | 1937.0 | 1669.0 | 1850.0 | 1809.0 | 1783.0 |
E014 | chr10 | 125853124 | 125853695 | TRUE | OK | 222.1 | 0.00566 | 0.1329 | 0.673 | 0.227 | 0.114 | 241.0 | 165.0 | 162.0 | 250.0 | 303.0 | 218.0 |
J015 | chr10 | 125823722 | 125826590 | TRUE | OK | 1841.6 | 0.00203 | 0.09284 | 0.6252 | 0.132 | 0.066 | 1890.0 | 1642.0 | 1382.0 | 1975.0 | 2110.0 | 2100.0 |
J016 | chr10 | 125826665 | 125827557 | TRUE | OK | 2010.8 | 0.00219 | 0.5658 | 0.8717 | 0.043 | 0.021 | 2137.0 | 1776.0 | 1607.0 | 2156.0 | 2228.0 | 2219.0 |
J017 | chr10 | 125827638 | 125830561 | TRUE | OK | 1710.3 | 0.00167 | 0.8343 | 0.9576 | -0.021 | -0.010 | 1811.0 | 1578.0 | 1395.0 | 1841.0 | 1860.0 | 1825.0 |
J018 | chr10 | 125827638 | 125831419 | TRUE | OK | 3.4 | 0.113 | 0.4206 | 0.8185 | 0.647 | 0.324 | 2.0 | 0.0 | 5.0 | 4.0 | 3.0 | 6.0 |
J019 | chr10 | 125830651 | 125831419 | TRUE | OK | 1433.3 | 0.00258 | 0.3041 | 0.7727 | -0.099 | -0.049 | 1635.0 | 1271.0 | 1215.0 | 1524.0 | 1549.0 | 1459.0 |
J020 | chr10 | 125831607 | 125833771 | TRUE | OK | 1759.0 | 0.00156 | 0.2331 | 0.7419 | -0.090 | -0.045 | 1921.0 | 1583.0 | 1521.0 | 1804.0 | 1929.0 | 1843.0 |
J021 | chr10 | 125833946 | 125836103 | TRUE | OK | 1854.1 | 0.00196 | 0.9583 | 0.9908 | 0.002 | 0.001 | 1973.0 | 1666.0 | 1511.0 | 1948.0 | 2294.0 | 1774.0 |
J022 | chr10 | 125833946 | 125841254 | TRUE | OK | 410.6 | 0.00181 | 0.5473 | 0.8648 | 0.052 | 0.026 | 411.0 | 366.0 | 340.0 | 461.0 | 447.0 | 446.0 |
J023 | chr10 | 125841330 | 125853124 | TRUE | OK | 143.2 | 0.00447 | 0.2645 | 0.7557 | 0.163 | 0.082 | 160.0 | 104.0 | 111.0 | 167.0 | 178.0 | 144.0 |
N024 | chr10 | 125833946 | 125836106 | TRUE | OK | 27.4 | 0.00545 | 0.735 | 0.9281 | 0.091 | 0.045 | 23.0 | 27.0 | 23.0 | 30.0 | 38.0 | 23.0 |
N025 | chr10 | 125836855 | 125838205 | TRUE | OK | 469.5 | 0.00536 | 1.332e-07 | 6.37e-05 | -0.707 | -0.354 | 615.0 | 491.0 | 530.0 | 421.0 | 444.0 | 335.0 |
N026 | chr10 | 125838387 | 125839000 | TRUE | OK | 456.2 | 0.00407 | 8.486e-10 | 7.106e-07 | -0.744 | -0.372 | 623.0 | 484.0 | 504.0 | 412.0 | 392.0 | 347.0 |
N027 | chr10 | 125839188 | 125840846 | TRUE | OK | 390.7 | 0.0011 | 1.046e-27 | 6.968e-24 | -0.904 | -0.452 | 541.0 | 460.0 | 442.0 | 297.0 | 316.0 | 310.0 |
N028 | chr10 | 125840996 | 125841742 | TRUE | OK | 422.8 | 0.00299 | 2.542e-17 | 7.402e-14 | -0.927 | -0.463 | 599.0 | 510.0 | 464.0 | 357.0 | 317.0 | 319.0 |
N029 | chr10 | 125841934 | 125852292 | TRUE | OK | 385.8 | 0.0031 | 4.221e-18 | 1.354e-14 | -0.975 | -0.487 | 577.0 | 449.0 | 431.0 | 285.0 | 290.0 | 312.0 |
N030 | chr10 | 125852451 | 125852542 | TRUE | OK | 583.1 | 0.0078 | 8.94e-10 | 7.386e-07 | -0.964 | -0.482 | 856.0 | 741.0 | 594.0 | 482.0 | 402.0 | 475.0 |
N031 | chr10 | 125852642 | 125853960 | TRUE | OK | 541.7 | 0.0162 | 6.298e-06 | 0.001693 | -0.989 | -0.495 | 829.0 | 661.0 | 564.0 | 449.0 | 331.0 | 469.0 |
Color Codes | |||||
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NO TEST | p > 0.05 | p < 0.05 | p < 0.005 | p < 5e-04 | p < 5e-05 |
Gene ENSG00000107949.17 | |||||||
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expr | exprTX | normCt | normCtTX | rExpr | rExprTX | rawCt | rawCtTX |
PLOT | PLOT | PLOT | PLOT | PLOT | PLOT | PLOT | PLOT |
TABLE | TABLE | TABLE | TABLE | TABLE | TABLE | TABLE | TABLE |