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| binID | chr | start | end | testable | status | baseMean | dispersion | pvalue | padjust | log2FC (mutant/control) | log2FCvst (mutant/control) | Raw Counts | |||||
| MCF10A-parental-DMSO-1 | MCF10A-parental-DMSO-2 | MCF10A-parental-DMSO-3 | MCF10A-KI-DMSO-7 | MCF10A-KI-DMSO-8 | MCF10A-KI-DMSO-9 | ||||||||||||
| E001 | chr10 | 125836336 | 125836339 | TRUE | OK | 994.0 | 0.0158 | 4.401e-06 | 0.001243 | 1.010 | 0.505 | 981.0 | 851.0 | 665.0 | 1017.0 | 1467.0 | 997.0 |
| E002 | chr10 | 125836339 | 125836855 | TRUE | OK | 2079.3 | 0.0167 | 0.003749 | 0.1729 | 0.654 | 0.327 | 2290.0 | 2023.0 | 1779.0 | 1919.0 | 2632.0 | 1878.0 |
| E003 | chr10 | 125838205 | 125838387 | TRUE | OK | 829.5 | 0.00113 | 0.7639 | 0.9372 | -0.021 | -0.011 | 1088.0 | 903.0 | 855.0 | 757.0 | 740.0 | 678.0 |
| E004 | chr10 | 125839000 | 125839188 | TRUE | OK | 808.2 | 0.0019 | 0.01521 | 0.3471 | -0.207 | -0.104 | 1127.0 | 932.0 | 857.0 | 722.0 | 636.0 | 630.0 |
| E005 | chr10 | 125840846 | 125840996 | TRUE | OK | 733.7 | 0.00193 | 2.003e-07 | 9.058e-05 | -0.454 | -0.227 | 1100.0 | 845.0 | 867.0 | 556.0 | 558.0 | 528.0 |
| E006 | chr10 | 125841742 | 125841934 | TRUE | OK | 1021.5 | 0.00249 | 0.2201 | 0.7353 | -0.116 | -0.058 | 1431.0 | 1084.0 | 1083.0 | 896.0 | 833.0 | 869.0 |
| E007 | chr10 | 125852292 | 125852451 | TRUE | OK | 878.8 | 0.00228 | 0.001934 | 0.1186 | -0.282 | -0.141 | 1239.0 | 994.0 | 990.0 | 752.0 | 665.0 | 689.0 |
| E008 | chr10 | 125852542 | 125852642 | TRUE | OK | 803.6 | 0.0054 | 0.03238 | 0.4642 | -0.279 | -0.140 | 1127.0 | 897.0 | 921.0 | 726.0 | 574.0 | 627.0 |
| E009 | chr10 | 125853960 | 125854203 | TRUE | OK | 917.4 | 0.00452 | 0.007185 | 0.2447 | -0.322 | -0.161 | 1294.0 | 1077.0 | 1025.0 | 801.0 | 639.0 | 731.0 |
| E010 | chr10 | 125854203 | 125854859 | TRUE | OK | 14.4 | 0.0213 | 0.4678 | 0.836 | -0.296 | -0.148 | 25.0 | 12.0 | 17.0 | 12.0 | 7.0 | 15.0 |
| E011 | chr10 | 125859602 | 125859975 | TRUE | OK | 995.4 | 0.00441 | 0.01902 | 0.3804 | -0.277 | -0.138 | 1386.0 | 1184.0 | 1074.0 | 844.0 | 704.0 | 849.0 |
| E012 | chr10 | 125866989 | 125867128 | TRUE | OK | 710.3 | 0.00463 | 0.02283 | 0.4086 | -0.280 | -0.140 | 1027.0 | 837.0 | 753.0 | 611.0 | 495.0 | 595.0 |
| E013 | chr10 | 125867128 | 125867183 | TRUE | OK | 503.6 | 0.00501 | 0.006383 | 0.2299 | -0.356 | -0.178 | 759.0 | 601.0 | 539.0 | 419.0 | 336.0 | 412.0 |
| E014 | chr10 | 125880542 | 125881071 | TRUE | OK | 1220.4 | 0.0129 | 0.03894 | 0.4945 | -0.391 | -0.195 | 1780.0 | 1519.0 | 1288.0 | 1071.0 | 747.0 | 1023.0 |
| E015 | chr10 | 125881071 | 125881315 | TRUE | OK | 23.2 | 0.0162 | 0.3603 | 0.7952 | -0.292 | -0.146 | 36.0 | 27.0 | 24.0 | 27.0 | 12.0 | 16.0 |
| E016 | chr10 | 125896217 | 125896436 | TRUE | OK | 514.3 | 0.0101 | 0.1803 | 0.7106 | -0.231 | -0.115 | 727.0 | 637.0 | 513.0 | 457.0 | 333.0 | 462.0 |
| J017 | chr10 | 125836855 | 125838205 | TRUE | OK | 434.1 | 0.00151 | 0.3958 | 0.8083 | -0.073 | -0.037 | 574.0 | 465.0 | 471.0 | 372.0 | 401.0 | 342.0 |
| J018 | chr10 | 125838387 | 125839000 | TRUE | OK | 447.8 | 0.00273 | 0.8065 | 0.9494 | -0.025 | -0.012 | 602.0 | 492.0 | 448.0 | 442.0 | 376.0 | 356.0 |
| J019 | chr10 | 125839188 | 125840846 | TRUE | OK | 392.7 | 0.00118 | 2.176e-06 | 0.0006938 | -0.403 | -0.201 | 566.0 | 465.0 | 462.0 | 317.0 | 284.0 | 288.0 |
| J020 | chr10 | 125840996 | 125841742 | TRUE | OK | 414.0 | 0.00292 | 2.497e-06 | 0.0007774 | -0.515 | -0.258 | 651.0 | 471.0 | 499.0 | 288.0 | 319.0 | 288.0 |
| J021 | chr10 | 125841934 | 125852292 | TRUE | OK | 383.2 | 0.0012 | 0.0007577 | 0.06535 | -0.288 | -0.144 | 545.0 | 436.0 | 435.0 | 319.0 | 289.0 | 300.0 |
| J022 | chr10 | 125852451 | 125852542 | TRUE | OK | 589.7 | 0.00337 | 0.01251 | 0.3184 | -0.275 | -0.137 | 835.0 | 662.0 | 669.0 | 523.0 | 430.0 | 458.0 |
| J023 | chr10 | 125852642 | 125853960 | TRUE | OK | 525.1 | 0.00489 | 0.01654 | 0.3598 | -0.307 | -0.153 | 743.0 | 600.0 | 602.0 | 478.0 | 371.0 | 391.0 |
| J024 | chr10 | 125854203 | 125859602 | TRUE | OK | 339.4 | 0.00332 | 0.005992 | 0.2225 | -0.322 | -0.161 | 454.0 | 418.0 | 390.0 | 277.0 | 232.0 | 284.0 |
| J025 | chr10 | 125859975 | 125866989 | TRUE | OK | 421.3 | 0.00374 | 0.06821 | 0.5792 | -0.216 | -0.108 | 608.0 | 481.0 | 443.0 | 371.0 | 300.0 | 358.0 |
| J026 | chr10 | 125867183 | 125880542 | TRUE | OK | 388.4 | 0.0038 | 6.331e-05 | 0.01074 | -0.483 | -0.241 | 592.0 | 479.0 | 440.0 | 285.0 | 250.0 | 317.0 |
| J027 | chr10 | 125881071 | 125896217 | TRUE | OK | 224.9 | 0.0246 | 0.1559 | 0.6932 | -0.374 | -0.187 | 345.0 | 306.0 | 209.0 | 211.0 | 117.0 | 188.0 |
| N028 | chr10 | 125833946 | 125841254 | TRUE | OK | 423.5 | 0.00115 | 3.872e-18 | 1.261e-14 | 0.711 | 0.355 | 412.0 | 390.0 | 341.0 | 490.0 | 451.0 | 465.0 |
| N029 | chr10 | 125841330 | 125853124 | TRUE | OK | 147.6 | 0.01 | 0.0005175 | 0.05076 | 0.679 | 0.340 | 129.0 | 154.0 | 114.0 | 142.0 | 194.0 | 152.0 |
| N030 | chr10 | 125881071 | 125885364 | TRUE | OK | 96.5 | 0.0347 | 0.01131 | 0.3045 | -0.823 | -0.412 | 169.0 | 143.0 | 100.0 | 84.0 | 35.0 | 62.0 |
| Color Codes | |||||
|---|---|---|---|---|---|
| NO TEST | p > 0.05 | p < 0.05 | p < 0.005 | p < 5e-04 | p < 5e-05 |
| Gene ENSG00000089876.11 | |||||||
|---|---|---|---|---|---|---|---|
| expr | exprTX | normCt | normCtTX | rExpr | rExprTX | rawCt | rawCtTX |
| PLOT | PLOT | PLOT | PLOT | PLOT | PLOT | PLOT | PLOT |
| TABLE | TABLE | TABLE | TABLE | TABLE | TABLE | TABLE | TABLE |