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| binID | chr | start | end | testable | status | baseMean | dispersion | pvalue | padjust | log2FC (yes/no) | log2FCvst (yes/no) | Normalized Coverage Counts | |||||
| MCF10A-KI-DMSO-7 | MCF10A-KI-DMSO-8 | MCF10A-KI-DMSO-9 | MCF10A-KI-BYL719-10 | MCF10A-KI-BYL719-11 | MCF10A-KI-BYL719-12 | ||||||||||||
| E001 | chr6 | 57114893 | 57114900 | FALSE | LOW_COUNTS_INDEP_FILTER | 1.8 | 0.128 | 0.9359 | NA | NA | NA | 1.0 | 1.0 | 3.0 | 2.0 | 3.9 | 0.0 |
| E002 | chr6 | 57114900 | 57114910 | FALSE | LOW_COUNTS_INDEP_FILTER | 1.8 | 0.128 | 0.9359 | NA | NA | NA | 1.0 | 1.0 | 3.0 | 2.0 | 3.9 | 0.0 |
| E003 | chr6 | 57114910 | 57114915 | FALSE | LOW_COUNTS_INDEP_FILTER | 1.5 | 0.101 | 0.5646 | NA | NA | NA | 1.0 | 1.0 | 3.0 | 2.0 | 2.0 | 0.0 |
| E004 | chr6 | 57114915 | 57114923 | FALSE | LOW_COUNTS_INDEP_FILTER | 1.7 | 0.101 | 0.7604 | NA | NA | NA | 1.0 | 1.0 | 3.0 | 3.0 | 2.0 | 0.0 |
| E005 | chr6 | 57114923 | 57114925 | FALSE | LOW_COUNTS_INDEP_FILTER | 1.7 | 0.101 | 0.7604 | NA | NA | NA | 1.0 | 1.0 | 3.0 | 3.0 | 2.0 | 0.0 |
| E006 | chr6 | 57114925 | 57115176 | FALSE | LOW_COUNTS_INDEP_FILTER | 3.6 | 0.0381 | 0.6739 | NA | NA | NA | 5.9 | 2.1 | 3.0 | 4.0 | 3.9 | 2.9 |
| E007 | chr6 | 57115176 | 57115258 | FALSE | LOW_COUNTS_INDEP_FILTER | 2.3 | 0.162 | 0.574 | NA | NA | NA | 5.9 | 2.1 | 0.0 | 1.0 | 2.0 | 2.9 |
| E008 | chr6 | 57115455 | 57115563 | FALSE | LOW_COUNTS_INDEP_FILTER | 2.6 | 0.168 | 0.3495 | NA | NA | NA | 5.9 | 0.0 | 4.0 | 4.0 | 1.0 | 1.0 |
| E009 | chr6 | 57116037 | 57116127 | FALSE | LOW_COUNTS_INDEP_FILTER | 1.0 | 0.128 | 0.1854 | NA | NA | NA | 1.0 | 0.0 | 0.0 | 2.0 | 2.0 | 1.0 |
| E010 | chr6 | 57116425 | 57116547 | FALSE | LOW_COUNTS_INDEP_FILTER | 1.2 | 0.206 | 0.9765 | NA | NA | NA | 1.0 | 2.1 | 0.0 | 3.0 | 1.0 | 0.0 |
| E011 | chr6 | 57116839 | 57116921 | FALSE | LOW_COUNTS_INDEP_FILTER | 2.0 | 0.0829 | 0.7283 | NA | NA | NA | 1.0 | 2.1 | 3.0 | 1.0 | 3.9 | 1.0 |
| E012 | chr6 | 57134146 | 57134215 | FALSE | LOW_COUNTS_INDEP_FILTER | 2.8 | 0.0865 | 0.5613 | NA | NA | NA | 2.0 | 2.1 | 2.0 | 1.0 | 6.9 | 2.9 |
| E013 | chr6 | 57147831 | 57148271 | TRUE | OK | 474.3 | 0.0112 | 0.173 | 0.7455 | 0.243 | 0.121 | 480.2 | 315.9 | 440.2 | 542.1 | 518.0 | 549.2 |
| E014 | chr6 | 57150513 | 57150804 | TRUE | OK | 208.7 | 0.00285 | 0.5236 | 0.8633 | -0.079 | -0.039 | 212.0 | 181.4 | 188.4 | 237.3 | 234.0 | 199.2 |
| E015 | chr6 | 57150804 | 57150902 | TRUE | OK | 213.6 | 0.00483 | 0.6433 | 0.9021 | -0.060 | -0.030 | 209.0 | 190.8 | 192.4 | 255.1 | 233.1 | 201.1 |
| E016 | chr6 | 57150902 | 57150946 | TRUE | OK | 29.2 | 0.0781 | 0.7517 | 0.9357 | 0.112 | 0.056 | 20.7 | 41.7 | 14.1 | 23.8 | 43.1 | 31.9 |
| E017 | chr6 | 57150946 | 57151027 | TRUE | OK | 31.7 | 0.084 | 0.81 | 0.9525 | 0.125 | 0.062 | 20.7 | 43.8 | 18.1 | 22.8 | 52.9 | 31.9 |
| E018 | chr6 | 57151027 | 57151195 | TRUE | OK | 38.2 | 0.0912 | 0.7571 | 0.9374 | -0.191 | -0.095 | 24.7 | 60.5 | 26.2 | 32.8 | 58.8 | 26.1 |
| E019 | chr6 | 57151822 | 57151906 | TRUE | OK | 22.4 | 0.0257 | 0.227 | 0.7677 | -0.431 | -0.215 | 19.7 | 22.9 | 28.2 | 12.9 | 24.5 | 26.1 |
| E020 | chr6 | 57164880 | 57165005 | FALSE | LOW_COUNTS_INDEP_FILTER | 0.5 | 0.254 | 0.494 | NA | NA | NA | 1.0 | 1.0 | 0.0 | 0.0 | 0.0 | 1.0 |
| E021 | chr6 | 57165005 | 57165176 | FALSE | LOW_COUNTS_INDEP_FILTER | 0.8 | 0.189 | 0.1598 | NA | NA | NA | 2.0 | 2.1 | 0.0 | 0.0 | 0.0 | 1.0 |
| E022 | chr6 | 57165176 | 57165218 | FALSE | LOW_COUNTS_INDEP_FILTER | 1.2 | 0.179 | 0.9536 | NA | NA | NA | 2.0 | 1.0 | 0.0 | 0.0 | 2.9 | 1.0 |
| E023 | chr6 | 57165218 | 57165343 | FALSE | LOW_COUNTS_INDEP_FILTER | 1.2 | 0.179 | 0.9536 | NA | NA | NA | 2.0 | 1.0 | 0.0 | 0.0 | 2.9 | 1.0 |
| E024 | chr6 | 57165343 | 57165433 | FALSE | LOW_COUNTS_INDEP_FILTER | 1.2 | 0.179 | 0.9536 | NA | NA | NA | 2.0 | 1.0 | 0.0 | 0.0 | 2.9 | 1.0 |
| E025 | chr6 | 57165433 | 57165775 | FALSE | LOW_COUNTS_INDEP_FILTER | 0.5 | 0.481 | 0.826 | NA | NA | NA | 0.0 | 1.0 | 0.0 | 0.0 | 0.0 | 1.9 |
| E026 | chr6 | 57165775 | 57165802 | FALSE | ALL_ZERO | 0.0 | NA | NA | NA | NA | NA | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 |
| E027 | chr6 | 57165802 | 57165840 | FALSE | ALL_ZERO | 0.0 | NA | NA | NA | NA | NA | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 |
| E028 | chr6 | 57170192 | 57171002 | TRUE | OK | 40.1 | 0.0233 | 0.4232 | 0.8309 | 0.252 | 0.126 | 29.6 | 44.8 | 25.2 | 47.7 | 47.0 | 46.4 |
| E029 | chr6 | 57171002 | 57171004 | FALSE | LOW_COUNTS_INDEP_FILTER | 2.0 | 0.0704 | 0.2022 | NA | NA | NA | 2.0 | 0.0 | 1.0 | 3.0 | 2.0 | 3.9 |
| E030 | chr6 | 57171004 | 57171049 | FALSE | LOW_COUNTS_INDEP_FILTER | 2.1 | 0.0664 | 0.1447 | NA | NA | NA | 2.0 | 0.0 | 1.0 | 4.0 | 2.0 | 3.9 |
| E031 | chr6 | 57171049 | 57171098 | FALSE | LOW_COUNTS_INDEP_FILTER | 2.0 | 0.077 | 0.4642 | NA | NA | NA | 3.0 | 0.0 | 1.0 | 4.0 | 2.0 | 1.9 |
| E032 | chr6 | 57172073 | 57172205 | FALSE | LOW_COUNTS_INDEP_FILTER | 1.1 | 0.845 | 0.85 | NA | NA | NA | 2.0 | 0.0 | 0.0 | 0.0 | 4.9 | 0.0 |
| E033 | chr6 | 57172205 | 57172242 | FALSE | LOW_COUNTS_INDEP_FILTER | 0.8 | 0.681 | 0.6399 | NA | NA | NA | 1.0 | 0.0 | 0.0 | 0.0 | 3.9 | 0.0 |
| E034 | chr6 | 57172242 | 57172422 | TRUE | OK | 56.1 | 0.0116 | 0.009101 | 0.3795 | -0.638 | -0.319 | 75.9 | 44.8 | 66.5 | 60.6 | 52.9 | 35.8 |
| E035 | chr6 | 57173079 | 57173135 | FALSE | LOW_COUNTS_INDEP_FILTER | 1.3 | 0.258 | 0.2547 | NA | NA | NA | 4.9 | 0.0 | 1.0 | 0.0 | 1.0 | 1.0 |
| E036 | chr6 | 57173375 | 57173480 | FALSE | LOW_COUNTS_INDEP_FILTER | 1.3 | 0.13 | 0.3252 | NA | NA | NA | 1.0 | 0.0 | 1.0 | 1.0 | 1.0 | 3.9 |
| E037 | chr6 | 57173736 | 57174236 | FALSE | LOW_COUNTS_INDEP_FILTER | 4.1 | 0.0367 | 0.9517 | NA | NA | NA | 4.9 | 3.1 | 3.0 | 3.0 | 3.9 | 6.8 |
| J038 | chr6 | 57115258 | 57115455 | FALSE | LOW_COUNTS_INDEP_FILTER | 1.0 | 0.719 | 0.4351 | NA | NA | NA | 4.9 | 0.0 | 0.0 | 1.0 | 0.0 | 0.0 |
| J039 | chr6 | 57115258 | 57171004 | FALSE | ALL_ZERO | 0.0 | NA | NA | NA | NA | NA | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 |
| J040 | chr6 | 57115563 | 57116037 | FALSE | ALL_ZERO | 0.0 | NA | NA | NA | NA | NA | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 |
| J041 | chr6 | 57115563 | 57116425 | FALSE | ALL_ZERO | 0.0 | NA | NA | NA | NA | NA | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 |
| J042 | chr6 | 57115563 | 57116839 | FALSE | ALL_ZERO | 0.0 | NA | NA | NA | NA | NA | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 |
| J043 | chr6 | 57115563 | 57134146 | FALSE | ALL_ZERO | 0.0 | NA | NA | NA | NA | NA | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 |
| J044 | chr6 | 57115563 | 57171004 | FALSE | ALL_ZERO | 0.0 | NA | NA | NA | NA | NA | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 |
| J045 | chr6 | 57116127 | 57116425 | FALSE | ALL_ZERO | 0.0 | NA | NA | NA | NA | NA | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 |
| J046 | chr6 | 57116127 | 57134146 | FALSE | ALL_ZERO | 0.0 | NA | NA | NA | NA | NA | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 |
| J047 | chr6 | 57116547 | 57116839 | FALSE | ALL_ZERO | 0.0 | NA | NA | NA | NA | NA | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 |
| J048 | chr6 | 57116547 | 57134146 | FALSE | ALL_ZERO | 0.0 | NA | NA | NA | NA | NA | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 |
| J049 | chr6 | 57116547 | 57171004 | FALSE | ALL_ZERO | 0.0 | NA | NA | NA | NA | NA | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 |
| J050 | chr6 | 57116921 | 57150902 | FALSE | ALL_ZERO | 0.0 | NA | NA | NA | NA | NA | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 |
| J051 | chr6 | 57116921 | 57151027 | FALSE | ALL_ZERO | 0.0 | NA | NA | NA | NA | NA | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 |
| J052 | chr6 | 57134215 | 57151027 | FALSE | ALL_ZERO | 0.0 | NA | NA | NA | NA | NA | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 |
| J053 | chr6 | 57134215 | 57151822 | FALSE | ALL_ZERO | 0.0 | NA | NA | NA | NA | NA | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 |
| J054 | chr6 | 57134215 | 57171004 | FALSE | ALL_ZERO | 0.0 | NA | NA | NA | NA | NA | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 |
| J055 | chr6 | 57148271 | 57151027 | FALSE | ALL_ZERO | 0.0 | NA | NA | NA | NA | NA | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 |
| J056 | chr6 | 57150946 | 57151027 | FALSE | LOW_COUNTS_INDEP_FILTER | 1.0 | 0.113 | 0.8026 | NA | NA | NA | 1.0 | 2.1 | 0.0 | 2.0 | 1.0 | 0.0 |
| J057 | chr6 | 57151195 | 57151822 | FALSE | ALL_ZERO | 0.0 | NA | NA | NA | NA | NA | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 |
| J058 | chr6 | 57151195 | 57171004 | FALSE | ALL_ZERO | 0.0 | NA | NA | NA | NA | NA | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 |
| J059 | chr6 | 57151906 | 57171004 | FALSE | ALL_ZERO | 0.0 | NA | NA | NA | NA | NA | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 |
| J060 | chr6 | 57165343 | 57171004 | FALSE | ALL_ZERO | 0.0 | NA | NA | NA | NA | NA | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 |
| J061 | chr6 | 57165433 | 57171004 | FALSE | ALL_ZERO | 0.0 | NA | NA | NA | NA | NA | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 |
| J062 | chr6 | 57165775 | 57171004 | FALSE | ALL_ZERO | 0.0 | NA | NA | NA | NA | NA | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 |
| J063 | chr6 | 57165802 | 57171004 | FALSE | ALL_ZERO | 0.0 | NA | NA | NA | NA | NA | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 |
| J064 | chr6 | 57165840 | 57171004 | FALSE | ALL_ZERO | 0.0 | NA | NA | NA | NA | NA | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 |
| J065 | chr6 | 57171098 | 57172073 | FALSE | ALL_ZERO | 0.0 | NA | NA | NA | NA | NA | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 |
| J066 | chr6 | 57171098 | 57173375 | FALSE | ALL_ZERO | 0.0 | NA | NA | NA | NA | NA | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 |
| J067 | chr6 | 57172205 | 57173079 | FALSE | ALL_ZERO | 0.0 | NA | NA | NA | NA | NA | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 |
| J068 | chr6 | 57173480 | 57173736 | FALSE | ALL_ZERO | 0.0 | NA | NA | NA | NA | NA | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 |
| N069 | chr6 | 57099141 | 57124733 | TRUE | OK | 114.0 | 0.0135 | 0.3868 | 0.8193 | 0.171 | 0.086 | 112.4 | 62.6 | 117.8 | 144.0 | 117.5 | 129.6 |
| N070 | chr6 | 57124859 | 57128728 | TRUE | OK | 106.2 | 0.00481 | 0.1365 | 0.7275 | 0.241 | 0.121 | 103.5 | 64.6 | 97.7 | 119.1 | 118.5 | 133.4 |
| N071 | chr6 | 57128840 | 57133041 | TRUE | OK | 138.5 | 0.0167 | 0.5567 | 0.8737 | 0.102 | 0.051 | 146.9 | 74.0 | 144.0 | 158.8 | 148.9 | 158.6 |
| N072 | chr6 | 57133192 | 57134743 | TRUE | OK | 124.3 | 0.0095 | 0.1433 | 0.7316 | 0.270 | 0.135 | 122.3 | 66.7 | 119.9 | 157.9 | 144.9 | 134.4 |
| N073 | chr6 | 57134870 | 57141301 | TRUE | OK | 97.3 | 0.0273 | 0.3992 | 0.8238 | 0.191 | 0.095 | 107.5 | 42.8 | 97.7 | 105.2 | 118.5 | 112.2 |
| N074 | chr6 | 57141455 | 57141947 | TRUE | OK | 101.1 | 0.0129 | 0.2838 | 0.7862 | 0.217 | 0.108 | 106.5 | 54.2 | 94.7 | 105.2 | 119.5 | 126.7 |
| N075 | chr6 | 57142095 | 57147089 | TRUE | OK | 106.4 | 0.0138 | 0.7974 | 0.9491 | 0.050 | 0.025 | 110.4 | 68.8 | 105.8 | 123.1 | 95.0 | 135.4 |
| N076 | chr6 | 57148693 | 57150718 | TRUE | OK | 132.6 | 0.00438 | 0.1378 | 0.7284 | -0.229 | -0.114 | 138.0 | 133.5 | 116.8 | 135.0 | 136.1 | 136.3 |
| N077 | chr6 | 57150862 | 57152220 | TRUE | OK | 117.6 | 0.00998 | 0.8457 | 0.9621 | 0.037 | 0.019 | 123.3 | 79.2 | 113.8 | 159.8 | 119.5 | 110.2 |
| N078 | chr6 | 57152351 | 57153860 | TRUE | OK | 158.4 | 0.00248 | 0.1453 | 0.7327 | 0.197 | 0.098 | 140.0 | 127.2 | 138.0 | 195.6 | 190.0 | 159.5 |
| N079 | chr6 | 57154047 | 57161083 | TRUE | OK | 153.0 | 0.00172 | 0.4302 | 0.8331 | -0.101 | -0.050 | 155.8 | 124.1 | 150.1 | 162.8 | 158.6 | 166.3 |
| N080 | chr6 | 57161152 | 57168422 | TRUE | OK | 152.7 | 0.00205 | 0.01174 | 0.4129 | -0.327 | -0.164 | 174.5 | 134.5 | 150.1 | 142.0 | 161.6 | 153.7 |
| N081 | chr6 | 57172810 | 57182031 | TRUE | OK | 59.0 | 0.00379 | 3.685e-05 | 0.01494 | -0.779 | -0.390 | 69.0 | 70.9 | 65.5 | 47.7 | 49.9 | 51.2 |
| Color Codes | |||||
|---|---|---|---|---|---|
| NO TEST | p > 0.05 | p < 0.05 | p < 0.005 | p < 5e-04 | p < 5e-05 |
| Gene ENSG00000226803.8 | |||||||
|---|---|---|---|---|---|---|---|
| expr | exprTX | normCt | normCtTX | rExpr | rExprTX | rawCt | rawCtTX |
| PLOT | PLOT | PLOT | PLOT | PLOT | PLOT | PLOT | PLOT |
| TABLE | TABLE | TABLE | TABLE | TABLE | TABLE | TABLE | TABLE |