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binID | chr | start | end | testable | status | baseMean | dispersion | pvalue | padjust | log2FC (yes/no) | log2FCvst (yes/no) | Normalized Coverage Counts | |||||
MCF10A-KI-DMSO-7 | MCF10A-KI-DMSO-8 | MCF10A-KI-DMSO-9 | MCF10A-KI-BYL719-10 | MCF10A-KI-BYL719-11 | MCF10A-KI-BYL719-12 | ||||||||||||
E001 | chr17 | 2322502 | 2324374 | TRUE | OK | 3884.1 | 0.00485 | 0.1924 | 0.7547 | -0.150 | -0.075 | 4445.9 | 4652.6 | 4416.7 | 3328.8 | 3203.2 | 3257.3 |
E002 | chr17 | 2324503 | 2324578 | TRUE | OK | 1505.5 | 0.00396 | 0.7812 | 0.9448 | -0.027 | -0.013 | 1755.1 | 1729.9 | 1637.7 | 1353.2 | 1187.9 | 1369.0 |
E003 | chr17 | 2324688 | 2324690 | TRUE | OK | 692.5 | 0.00342 | 0.5532 | 0.8728 | 0.067 | 0.033 | 795.7 | 767.4 | 732.3 | 636.4 | 562.1 | 661.3 |
E004 | chr17 | 2324690 | 2324829 | TRUE | OK | 1044.1 | 0.00275 | 0.8338 | 0.9589 | 0.022 | 0.011 | 1238.4 | 1136.6 | 1131.1 | 972.9 | 836.3 | 949.4 |
E005 | chr17 | 2325303 | 2325420 | TRUE | OK | 1063.4 | 0.00107 | 0.7719 | 0.9418 | -0.020 | -0.010 | 1283.8 | 1142.8 | 1185.5 | 952.1 | 898.0 | 918.5 |
E006 | chr17 | 2329342 | 2329475 | TRUE | OK | 1114.2 | 0.0011 | 0.7883 | 0.9465 | -0.020 | -0.010 | 1359.7 | 1136.6 | 1288.2 | 999.7 | 939.1 | 962.0 |
E007 | chr17 | 2330514 | 2330625 | TRUE | OK | 1111.4 | 0.00127 | 0.9525 | 0.989 | -0.005 | -0.002 | 1327.2 | 1162.6 | 1270.1 | 956.1 | 936.2 | 1016.1 |
E008 | chr17 | 2330946 | 2330966 | TRUE | OK | 856.8 | 0.00269 | 0.9513 | 0.9887 | -0.003 | -0.002 | 1001.8 | 925.9 | 970.0 | 755.5 | 677.7 | 810.2 |
E009 | chr17 | 2330966 | 2331109 | TRUE | OK | 1569.0 | 0.00154 | 0.6871 | 0.9158 | 0.027 | 0.014 | 1896.1 | 1584.9 | 1781.8 | 1411.7 | 1314.2 | 1425.1 |
E010 | chr17 | 2332168 | 2332359 | TRUE | OK | 1856.5 | 0.0013 | 0.3992 | 0.8238 | 0.053 | 0.027 | 2204.7 | 1827.9 | 2154.4 | 1681.8 | 1609.0 | 1661.0 |
E011 | chr17 | 2332960 | 2333124 | TRUE | OK | 1571.5 | 0.000958 | 0.1415 | 0.7309 | 0.087 | 0.043 | 1841.9 | 1550.5 | 1795.9 | 1435.6 | 1389.6 | 1415.4 |
E012 | chr17 | 2333389 | 2333556 | FALSE | LOW_COUNTS_INDEP_FILTER | 5.7 | 0.075 | 0.3149 | NA | NA | NA | 2.0 | 9.4 | 4.0 | 6.9 | 7.8 | 3.9 |
E013 | chr17 | 2333556 | 2333716 | TRUE | OK | 1372.2 | 0.00112 | 0.1994 | 0.7575 | 0.081 | 0.040 | 1605.2 | 1346.2 | 1584.4 | 1230.1 | 1235.9 | 1231.7 |
E014 | chr17 | 2334471 | 2334784 | TRUE | OK | 1587.3 | 0.00203 | 0.2951 | 0.7901 | 0.080 | 0.040 | 1933.6 | 1527.6 | 1788.8 | 1445.5 | 1415.1 | 1413.5 |
E015 | chr17 | 2334784 | 2334896 | TRUE | OK | 1091.6 | 0.0051 | 0.4278 | 0.8323 | 0.087 | 0.043 | 1373.5 | 969.7 | 1257.0 | 1010.7 | 948.9 | 990.0 |
E016 | chr17 | 2335259 | 2335307 | TRUE | OK | 842.1 | 0.00685 | 0.5569 | 0.8738 | 0.067 | 0.034 | 1041.2 | 717.4 | 1032.4 | 747.6 | 757.0 | 757.0 |
E017 | chr17 | 2335307 | 2335394 | TRUE | OK | 953.1 | 0.00531 | 0.6882 | 0.9161 | 0.038 | 0.019 | 1188.1 | 843.6 | 1154.3 | 863.7 | 830.4 | 838.2 |
E018 | chr17 | 2335510 | 2335564 | TRUE | OK | 830.6 | 0.00502 | 0.608 | 0.8906 | 0.053 | 0.026 | 1051.1 | 741.4 | 972.0 | 777.4 | 715.9 | 726.1 |
E019 | chr17 | 2335564 | 2335730 | TRUE | OK | 1374.8 | 0.00629 | 0.3966 | 0.8227 | 0.102 | 0.051 | 1678.2 | 1192.9 | 1647.8 | 1276.7 | 1180.0 | 1273.3 |
E020 | chr17 | 2336036 | 2336140 | TRUE | OK | 963.6 | 0.00823 | 0.1566 | 0.7375 | 0.203 | 0.101 | 1126.0 | 778.9 | 1166.4 | 918.3 | 854.9 | 936.9 |
E021 | chr17 | 2336140 | 2336330 | TRUE | OK | 68.9 | 0.0143 | 0.4635 | 0.8439 | -0.205 | -0.102 | 85.8 | 55.3 | 105.8 | 61.6 | 49.9 | 55.1 |
E022 | chr17 | 2336330 | 2336443 | TRUE | OK | 640.6 | 0.0116 | 0.1836 | 0.7504 | 0.221 | 0.110 | 764.2 | 482.8 | 779.6 | 619.5 | 566.0 | 631.3 |
E023 | chr17 | 2336443 | 2336457 | TRUE | OK | 61.5 | 0.0264 | 0.0138 | 0.4359 | 0.726 | 0.363 | 68.0 | 29.2 | 64.5 | 62.5 | 63.7 | 81.2 |
E024 | chr17 | 2336457 | 2336657 | TRUE | OK | 34.5 | 0.0153 | 0.001482 | 0.1636 | 0.899 | 0.450 | 30.6 | 15.6 | 38.3 | 43.7 | 42.1 | 36.7 |
E025 | chr17 | 2336657 | 2337507 | TRUE | OK | 73.7 | 0.0096 | 3.705e-05 | 0.01499 | 0.878 | 0.439 | 77.9 | 53.2 | 51.4 | 88.4 | 96.9 | 74.4 |
J026 | chr17 | 2324374 | 2324503 | TRUE | OK | 1207.2 | 0.00357 | 0.5959 | 0.8866 | -0.052 | -0.026 | 1416.9 | 1384.7 | 1334.6 | 1075.2 | 931.3 | 1100.3 |
J027 | chr17 | 2324578 | 2324688 | TRUE | OK | 660.9 | 0.00337 | 0.6266 | 0.8967 | 0.055 | 0.028 | 769.1 | 733.0 | 696.0 | 594.7 | 535.7 | 637.1 |
J028 | chr17 | 2324829 | 2325303 | TRUE | OK | 561.4 | 0.00267 | 0.7234 | 0.9272 | -0.036 | -0.018 | 708.9 | 603.7 | 603.3 | 521.2 | 445.6 | 485.4 |
J029 | chr17 | 2325420 | 2329342 | TRUE | OK | 702.2 | 0.000556 | 0.7845 | 0.9456 | 0.015 | 0.008 | 830.2 | 722.6 | 808.8 | 620.5 | 620.9 | 610.1 |
J030 | chr17 | 2325420 | 2330514 | FALSE | LOW_COUNTS_INDEP_FILTER | 1.5 | 0.184 | 0.5342 | NA | NA | NA | 2.0 | 3.1 | 1.0 | 0.0 | 2.9 | 0.0 |
J031 | chr17 | 2329475 | 2330514 | TRUE | OK | 672.8 | 0.00152 | 0.5318 | 0.8659 | 0.046 | 0.023 | 822.3 | 652.7 | 767.5 | 584.8 | 598.3 | 611.0 |
J032 | chr17 | 2330625 | 2330946 | TRUE | OK | 756.5 | 0.00185 | 0.8308 | 0.958 | -0.016 | -0.008 | 887.4 | 815.4 | 865.2 | 664.2 | 599.3 | 707.7 |
J033 | chr17 | 2331109 | 2332168 | TRUE | OK | 1069.4 | 0.0015 | 0.5236 | 0.8633 | 0.045 | 0.022 | 1295.6 | 1051.1 | 1221.8 | 963.0 | 902.9 | 982.3 |
J034 | chr17 | 2332359 | 2332960 | TRUE | OK | 900.9 | 0.000958 | 0.1634 | 0.7408 | 0.089 | 0.044 | 1055.0 | 872.8 | 1039.5 | 830.0 | 783.4 | 824.7 |
J035 | chr17 | 2333124 | 2333556 | TRUE | OK | 807.1 | 0.000673 | 0.0921 | 0.691 | 0.101 | 0.050 | 940.7 | 793.5 | 914.6 | 737.6 | 715.9 | 740.6 |
J036 | chr17 | 2333716 | 2334471 | TRUE | OK | 651.0 | 0.000975 | 0.4178 | 0.8294 | 0.054 | 0.027 | 768.1 | 637.1 | 759.4 | 575.8 | 569.0 | 596.5 |
J037 | chr17 | 2334896 | 2335259 | TRUE | OK | 608.1 | 0.00823 | 0.5709 | 0.8785 | 0.071 | 0.036 | 751.3 | 504.7 | 756.4 | 541.1 | 520.0 | 575.3 |
J038 | chr17 | 2334896 | 2335307 | FALSE | LOW_COUNTS_INDEP_FILTER | 9.6 | 0.0461 | 0.4084 | NA | NA | NA | 12.8 | 4.2 | 11.1 | 6.0 | 14.7 | 8.7 |
J039 | chr17 | 2335394 | 2335510 | TRUE | OK | 632.6 | 0.00331 | 0.5763 | 0.8803 | 0.051 | 0.025 | 788.8 | 574.5 | 742.3 | 575.8 | 559.2 | 555.0 |
J040 | chr17 | 2335730 | 2336036 | TRUE | OK | 762.3 | 0.0061 | 0.1974 | 0.7565 | 0.164 | 0.082 | 881.5 | 644.4 | 929.7 | 710.8 | 665.9 | 741.6 |
J041 | chr17 | 2335730 | 2336330 | FALSE | LOW_COUNTS_INDEP_FILTER | 8.6 | 0.0212 | 0.8335 | NA | NA | NA | 11.8 | 6.3 | 10.1 | 7.9 | 3.9 | 11.6 |
J042 | chr17 | 2336140 | 2336330 | TRUE | OK | 609.2 | 0.0108 | 0.1893 | 0.7534 | 0.212 | 0.106 | 726.7 | 466.1 | 739.3 | 590.7 | 533.7 | 598.5 |
N043 | chr17 | 2321616 | 2323135 | TRUE | OK | 38.8 | 0.0114 | 0.1979 | 0.7567 | 0.322 | 0.161 | 31.6 | 32.3 | 54.4 | 37.7 | 39.2 | 37.7 |
N044 | chr17 | 2323345 | 2323654 | TRUE | OK | 37.5 | 0.0279 | 0.823 | 0.956 | 0.103 | 0.052 | 43.4 | 46.9 | 32.2 | 49.6 | 27.4 | 25.1 |
Color Codes | |||||
---|---|---|---|---|---|
NO TEST | p > 0.05 | p < 0.05 | p < 0.005 | p < 5e-04 | p < 5e-05 |
Gene ENSG00000167721.10 | |||||||
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expr | exprTX | normCt | normCtTX | rExpr | rExprTX | rawCt | rawCtTX |
PLOT | PLOT | PLOT | PLOT | PLOT | PLOT | PLOT | PLOT |
TABLE | TABLE | TABLE | TABLE | TABLE | TABLE | TABLE | TABLE |