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binID | chr | start | end | testable | status | baseMean | dispersion | pvalue | padjust | log2FC (mutant/control) | log2FCvst (mutant/control) | Raw Counts | |||||
MCF10A-parental-DMSO-1 | MCF10A-parental-DMSO-2 | MCF10A-parental-DMSO-3 | MCF10A-KI-DMSO-7 | MCF10A-KI-DMSO-8 | MCF10A-KI-DMSO-9 | ||||||||||||
E001 | chr6 | 33272074 | 33272087 | TRUE | OK | 1605.4 | 0.00186 | 0.04932 | 0.5308 | -0.161 | -0.080 | 1893.0 | 1740.0 | 1467.0 | 1508.0 | 1722.0 | 1363.0 |
E002 | chr6 | 33272087 | 33272095 | TRUE | OK | 9974.9 | 0.00455 | 0.1007 | 0.6361 | -0.201 | -0.101 | 11679.0 | 10811.0 | 9371.0 | 9607.0 | 10075.0 | 8675.0 |
E003 | chr6 | 33272095 | 33272098 | TRUE | OK | 13265.2 | 0.00426 | 0.07802 | 0.5991 | -0.209 | -0.104 | 15546.0 | 14300.0 | 12496.0 | 12616.0 | 13515.0 | 11598.0 |
E004 | chr6 | 33272098 | 33272122 | TRUE | OK | 24550.0 | 0.00448 | 0.03217 | 0.4631 | -0.258 | -0.129 | 28933.0 | 26197.0 | 23388.0 | 22726.0 | 25262.0 | 21654.0 |
E005 | chr6 | 33272131 | 33272586 | TRUE | OK | 303.3 | 0.0129 | 0.01396 | 0.3347 | 0.481 | 0.240 | 329.0 | 236.0 | 202.0 | 312.0 | 360.0 | 393.0 |
E006 | chr6 | 33272586 | 33272627 | TRUE | OK | 494.5 | 0.00495 | 0.001576 | 0.1046 | 0.395 | 0.197 | 436.0 | 449.0 | 391.0 | 509.0 | 598.0 | 583.0 |
E007 | chr6 | 33272627 | 33272726 | TRUE | OK | 44828.1 | 0.00181 | 0.2208 | 0.7356 | -0.097 | -0.048 | 50529.0 | 46189.0 | 40177.0 | 41322.0 | 51589.0 | 40383.0 |
E008 | chr6 | 33275320 | 33275499 | TRUE | OK | 70.3 | 0.0117 | 0.7681 | 0.9386 | 0.047 | 0.023 | 94.0 | 73.0 | 44.0 | 65.0 | 81.0 | 71.0 |
E009 | chr6 | 33275499 | 33275657 | TRUE | OK | 103.9 | 0.00689 | 0.7278 | 0.926 | -0.079 | -0.039 | 135.0 | 108.0 | 81.0 | 98.0 | 106.0 | 103.0 |
E010 | chr6 | 33275657 | 33275796 | TRUE | OK | 722.7 | 0.00413 | 1.016e-42 | 1.541e-38 | 1.617 | 0.808 | 359.0 | 365.0 | 334.0 | 1099.0 | 1172.0 | 976.0 |
E011 | chr6 | 33275796 | 33275865 | TRUE | OK | 60229.4 | 0.00352 | 0.355 | 0.7932 | -0.108 | -0.054 | 67258.0 | 62098.0 | 53592.0 | 55968.0 | 69797.0 | 54235.0 |
E012 | chr6 | 33275865 | 33275883 | TRUE | OK | 50625.0 | 0.00421 | 0.8867 | 0.9725 | 0.014 | 0.007 | 57473.0 | 51777.0 | 43039.0 | 47608.0 | 60186.0 | 45277.0 |
E013 | chr6 | 33275883 | 33275964 | TRUE | OK | 1601.1 | 0.00888 | 2.379e-07 | 0.0001049 | 0.807 | 0.403 | 996.0 | 1306.0 | 1148.0 | 1801.0 | 2406.0 | 1875.0 |
E014 | chr6 | 33275964 | 33276066 | TRUE | OK | 62190.9 | 0.0102 | 0.6132 | 0.8881 | 0.097 | 0.048 | 70577.0 | 63093.0 | 52250.0 | 58552.0 | 75241.0 | 55409.0 |
E015 | chr6 | 33276066 | 33276175 | TRUE | OK | 1425.3 | 0.00538 | 4.062e-10 | 3.697e-07 | 0.775 | 0.387 | 983.0 | 1198.0 | 953.0 | 1768.0 | 2041.0 | 1572.0 |
E016 | chr6 | 33276175 | 33276267 | TRUE | OK | 39734.7 | 0.00491 | 0.624 | 0.892 | 0.064 | 0.032 | 45488.0 | 40232.0 | 32808.0 | 37746.0 | 48764.0 | 34730.0 |
E017 | chr6 | 33276267 | 33276390 | TRUE | OK | 253.0 | 0.00149 | 3.559e-36 | 3.912e-32 | 1.281 | 0.641 | 154.0 | 156.0 | 129.0 | 318.0 | 420.0 | 332.0 |
E018 | chr6 | 33276390 | 33276505 | TRUE | OK | 26011.0 | 0.00354 | 0.9596 | 0.9911 | 0.017 | 0.008 | 30124.0 | 26185.0 | 21875.0 | 24045.0 | 32465.0 | 22239.0 |
E019 | chr6 | 33276505 | 33276510 | TRUE | OK | 189.1 | 0.00609 | 0.6289 | 0.8938 | -0.076 | -0.038 | 248.0 | 167.0 | 172.0 | 169.0 | 228.0 | 160.0 |
E020 | chr6 | 33276510 | 33276511 | TRUE | OK | 6.2 | 0.0254 | 0.7759 | 0.9408 | -0.156 | -0.078 | 8.0 | 9.0 | 3.0 | 7.0 | 8.0 | 3.0 |
J021 | chr6 | 33272122 | 33272586 | TRUE | OK | 89.7 | 0.00208 | 0.5418 | 0.8629 | 0.087 | 0.044 | 89.0 | 85.0 | 86.0 | 89.0 | 107.0 | 82.0 |
J022 | chr6 | 33272122 | 33272627 | TRUE | OK | 24428.2 | 0.00429 | 0.02791 | 0.4404 | -0.259 | -0.130 | 28803.0 | 26082.0 | 23273.0 | 22607.0 | 25132.0 | 21530.0 |
J023 | chr6 | 33272726 | 33275499 | TRUE | OK | 16.8 | 0.00763 | 0.6494 | 0.9006 | -0.152 | -0.076 | 16.0 | 24.0 | 13.0 | 15.0 | 19.0 | 14.0 |
J024 | chr6 | 33272726 | 33275796 | TRUE | OK | 43926.8 | 0.00165 | 0.1981 | 0.7223 | -0.096 | -0.048 | 49721.0 | 45224.0 | 39268.0 | 40507.0 | 50609.0 | 39467.0 |
J025 | chr6 | 33275657 | 33275796 | TRUE | OK | 20.2 | 0.00663 | 0.3136 | 0.7767 | -0.291 | -0.145 | 25.0 | 25.0 | 17.0 | 12.0 | 27.0 | 16.0 |
J026 | chr6 | 33275883 | 33275964 | TRUE | OK | 45105.7 | 0.00513 | 0.8558 | 0.9636 | 0.020 | 0.010 | 51973.0 | 45986.0 | 37731.0 | 42738.0 | 53535.0 | 40292.0 |
J027 | chr6 | 33276066 | 33276175 | TRUE | OK | 34749.7 | 0.00478 | 0.9437 | 0.9872 | 0.009 | 0.005 | 40568.0 | 35493.0 | 28719.0 | 33023.0 | 41659.0 | 30388.0 |
J028 | chr6 | 33276267 | 33276390 | TRUE | OK | 25832.4 | 0.00337 | 0.8827 | 0.9714 | -0.002 | -0.001 | 30061.0 | 26126.0 | 21819.0 | 23699.0 | 32169.0 | 21996.0 |
N029 | chr6 | 33275883 | 33275940 | TRUE | OK | 11.5 | 0.0103 | 0.3256 | 0.7818 | -0.389 | -0.195 | 12.0 | 15.0 | 12.0 | 13.0 | 9.0 | 8.0 |
N030 | chr6 | 33275883 | 33275991 | TRUE | OK | 22.8 | 0.015 | 0.5015 | 0.8483 | -0.230 | -0.115 | 23.0 | 19.0 | 31.0 | 21.0 | 22.0 | 20.0 |
N031 | chr6 | 33276066 | 33276390 | TRUE | OK | 20.3 | 0.00759 | 0.5918 | 0.8806 | 0.155 | 0.078 | 15.0 | 23.0 | 19.0 | 24.0 | 23.0 | 17.0 |
Color Codes | |||||
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NO TEST | p > 0.05 | p < 0.05 | p < 0.005 | p < 5e-04 | p < 5e-05 |
Gene ENSG00000231500.7 | |||||||
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expr | exprTX | normCt | normCtTX | rExpr | rExprTX | rawCt | rawCtTX |
PLOT | PLOT | PLOT | PLOT | PLOT | PLOT | PLOT | PLOT |
TABLE | TABLE | TABLE | TABLE | TABLE | TABLE | TABLE | TABLE |