| << | < Prev Gene | TOP | Next Gene > | >> | |
| binID | chr | start | end | testable | status | baseMean | dispersion | pvalue | padjust | log2FC (mutant/control) | log2FCvst (mutant/control) | Raw Counts | |||||
| MCF10A-parental-DMSO-1 | MCF10A-parental-DMSO-2 | MCF10A-parental-DMSO-3 | MCF10A-KI-DMSO-7 | MCF10A-KI-DMSO-8 | MCF10A-KI-DMSO-9 | ||||||||||||
| E001 | chr11 | 10751245 | 10751451 | TRUE | OK | 408.5 | 0.034 | 0.3919 | 0.8068 | -0.206 | -0.103 | 524.0 | 442.0 | 332.0 | 513.0 | 223.0 | 454.0 |
| E002 | chr11 | 10751451 | 10751457 | TRUE | OK | 259.2 | 0.0371 | 0.2087 | 0.7284 | -0.344 | -0.172 | 352.0 | 288.0 | 222.0 | 324.0 | 128.0 | 267.0 |
| E003 | chr11 | 10752671 | 10752770 | TRUE | OK | 397.5 | 0.0395 | 0.2065 | 0.727 | -0.348 | -0.174 | 533.0 | 438.0 | 348.0 | 496.0 | 194.0 | 414.0 |
| E004 | chr11 | 10754957 | 10755197 | TRUE | OK | 680.4 | 0.0238 | 0.1841 | 0.7136 | -0.299 | -0.150 | 846.0 | 734.0 | 624.0 | 834.0 | 404.0 | 689.0 |
| E005 | chr11 | 10755677 | 10755795 | TRUE | OK | 516.4 | 0.0192 | 0.1836 | 0.7133 | -0.275 | -0.137 | 621.0 | 550.0 | 489.0 | 629.0 | 319.0 | 522.0 |
| E006 | chr11 | 10756748 | 10756838 | TRUE | OK | 349.1 | 0.0259 | 0.2137 | 0.7317 | -0.291 | -0.145 | 461.0 | 357.0 | 319.0 | 441.0 | 200.0 | 346.0 |
| E007 | chr11 | 10760172 | 10760321 | TRUE | OK | 421.3 | 0.0321 | 0.4568 | 0.8317 | -0.161 | -0.081 | 541.0 | 410.0 | 366.0 | 569.0 | 240.0 | 437.0 |
| E008 | chr11 | 10761946 | 10762054 | TRUE | OK | 319.6 | 0.0266 | 0.5846 | 0.8784 | -0.098 | -0.049 | 397.0 | 303.0 | 278.0 | 433.0 | 194.0 | 337.0 |
| E009 | chr11 | 10763430 | 10763538 | TRUE | OK | 357.6 | 0.019 | 0.4094 | 0.814 | -0.157 | -0.078 | 427.0 | 349.0 | 334.0 | 456.0 | 229.0 | 372.0 |
| E010 | chr11 | 10763642 | 10763734 | TRUE | OK | 331.6 | 0.0119 | 0.2174 | 0.7337 | -0.217 | -0.108 | 411.0 | 327.0 | 313.0 | 381.0 | 226.0 | 352.0 |
| E011 | chr11 | 10763734 | 10763879 | TRUE | OK | 458.7 | 0.0126 | 0.461 | 0.8335 | -0.122 | -0.061 | 555.0 | 436.0 | 418.0 | 494.0 | 330.0 | 545.0 |
| E012 | chr11 | 10764111 | 10764201 | TRUE | OK | 442.8 | 0.017 | 0.2424 | 0.7462 | -0.233 | -0.117 | 567.0 | 434.0 | 411.0 | 470.0 | 289.0 | 516.0 |
| E013 | chr11 | 10764307 | 10764436 | TRUE | OK | 521.6 | 0.0123 | 0.2713 | 0.7587 | -0.190 | -0.095 | 648.0 | 521.0 | 470.0 | 588.0 | 364.0 | 573.0 |
| E014 | chr11 | 10764547 | 10764731 | TRUE | OK | 624.5 | 0.011 | 0.2269 | 0.7389 | -0.198 | -0.099 | 718.0 | 649.0 | 588.0 | 706.0 | 439.0 | 677.0 |
| E015 | chr11 | 10766333 | 10766401 | FALSE | LOW_COUNTS_INDEP_FILTER | 1.6 | 0.0796 | 0.9619 | NA | NA | NA | 3.0 | 2.0 | 0.0 | 2.0 | 1.0 | 2.0 |
| E016 | chr11 | 10766401 | 10766490 | TRUE | OK | 479.9 | 0.0115 | 0.1097 | 0.6481 | -0.280 | -0.140 | 540.0 | 508.0 | 489.0 | 526.0 | 325.0 | 509.0 |
| E017 | chr11 | 10767050 | 10767805 | TRUE | OK | 25.5 | 0.0105 | 0.004096 | 0.1817 | 0.854 | 0.427 | 12.0 | 18.0 | 22.0 | 35.0 | 34.0 | 30.0 |
| E018 | chr11 | 10767805 | 10767991 | TRUE | OK | 698.4 | 0.00409 | 0.06028 | 0.5606 | -0.212 | -0.106 | 792.0 | 736.0 | 664.0 | 734.0 | 553.0 | 739.0 |
| E019 | chr11 | 10768073 | 10768161 | TRUE | OK | 572.0 | 0.00492 | 0.09685 | 0.6309 | -0.203 | -0.102 | 690.0 | 584.0 | 526.0 | 610.0 | 446.0 | 607.0 |
| E020 | chr11 | 10768342 | 10768459 | TRUE | OK | 641.0 | 0.0014 | 0.001941 | 0.1189 | -0.243 | -0.121 | 786.0 | 667.0 | 588.0 | 642.0 | 557.0 | 640.0 |
| E021 | chr11 | 10768459 | 10768476 | TRUE | OK | 426.3 | 0.00158 | 0.003207 | 0.1583 | -0.259 | -0.130 | 535.0 | 447.0 | 387.0 | 417.0 | 380.0 | 416.0 |
| E022 | chr11 | 10768476 | 10768491 | TRUE | OK | 415.8 | 0.00163 | 0.005928 | 0.2213 | -0.245 | -0.123 | 520.0 | 437.0 | 373.0 | 416.0 | 366.0 | 407.0 |
| E023 | chr11 | 10770209 | 10770326 | TRUE | OK | 655.7 | 0.000925 | 0.4687 | 0.8364 | -0.049 | -0.024 | 746.0 | 644.0 | 572.0 | 702.0 | 626.0 | 671.0 |
| E024 | chr11 | 10770486 | 10770632 | TRUE | OK | 704.2 | 0.00103 | 0.4259 | 0.8205 | 0.059 | 0.030 | 745.0 | 677.0 | 608.0 | 811.0 | 686.0 | 719.0 |
| E025 | chr11 | 10771544 | 10771616 | TRUE | OK | 534.2 | 0.00128 | 0.1335 | 0.6734 | 0.122 | 0.061 | 546.0 | 485.0 | 473.0 | 602.0 | 557.0 | 552.0 |
| E026 | chr11 | 10772506 | 10772519 | TRUE | OK | 6.6 | 0.0192 | 0.2035 | 0.7252 | 0.667 | 0.334 | 6.0 | 5.0 | 4.0 | 10.0 | 6.0 | 9.0 |
| E027 | chr11 | 10772519 | 10772655 | TRUE | OK | 561.6 | 0.00421 | 0.3469 | 0.7899 | 0.115 | 0.057 | 569.0 | 516.0 | 498.0 | 583.0 | 642.0 | 568.0 |
| E028 | chr11 | 10773126 | 10773273 | TRUE | OK | 633.0 | 0.0135 | 0.2571 | 0.7522 | 0.245 | 0.122 | 621.0 | 563.0 | 524.0 | 625.0 | 845.0 | 622.0 |
| E029 | chr11 | 10774011 | 10774169 | TRUE | OK | 877.1 | 0.0176 | 0.407 | 0.813 | 0.209 | 0.105 | 854.0 | 833.0 | 716.0 | 875.0 | 1183.0 | 805.0 |
| E030 | chr11 | 10774169 | 10774309 | TRUE | OK | 5.2 | 0.197 | 0.6704 | 0.9078 | 0.474 | 0.237 | 4.0 | 8.0 | 1.0 | 12.0 | 1.0 | 6.0 |
| E031 | chr11 | 10775206 | 10775303 | TRUE | OK | 948.0 | 0.0143 | 0.5033 | 0.849 | 0.153 | 0.077 | 961.0 | 898.0 | 791.0 | 951.0 | 1223.0 | 874.0 |
| E032 | chr11 | 10775520 | 10775633 | TRUE | OK | 921.9 | 0.0116 | 0.6712 | 0.9081 | 0.091 | 0.045 | 965.0 | 852.0 | 811.0 | 912.0 | 1142.0 | 861.0 |
| E033 | chr11 | 10778678 | 10779746 | TRUE | OK | 1908.3 | 0.0165 | 0.2735 | 0.7598 | 0.248 | 0.124 | 1919.0 | 1742.0 | 1579.0 | 1932.0 | 2438.0 | 1859.0 |
| E034 | chr11 | 10783289 | 10783374 | FALSE | ALL_ZERO | 0.0 | NA | NA | NA | NA | NA | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 |
| E035 | chr11 | 10792094 | 10792302 | FALSE | ALL_ZERO | 0.0 | NA | NA | NA | NA | NA | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 |
| E036 | chr11 | 10801454 | 10801625 | TRUE | OK | 34.9 | 0.0067 | 0.9701 | 0.9936 | 0.013 | 0.007 | 45.0 | 29.0 | 29.0 | 43.0 | 28.0 | 38.0 |
| J037 | chr11 | 10751457 | 10752671 | TRUE | OK | 250.8 | 0.0376 | 0.2051 | 0.7262 | -0.354 | -0.177 | 343.0 | 278.0 | 216.0 | 312.0 | 126.0 | 255.0 |
| J038 | chr11 | 10752770 | 10754957 | TRUE | OK | 249.5 | 0.043 | 0.1405 | 0.6796 | -0.442 | -0.221 | 342.0 | 290.0 | 222.0 | 309.0 | 115.0 | 244.0 |
| J039 | chr11 | 10755197 | 10755677 | TRUE | OK | 368.0 | 0.0146 | 0.2244 | 0.7376 | -0.226 | -0.113 | 430.0 | 390.0 | 346.0 | 451.0 | 244.0 | 367.0 |
| J040 | chr11 | 10755795 | 10756748 | TRUE | OK | 261.4 | 0.0321 | 0.2274 | 0.7391 | -0.312 | -0.156 | 352.0 | 269.0 | 238.0 | 324.0 | 139.0 | 270.0 |
| J041 | chr11 | 10756838 | 10760172 | TRUE | OK | 224.2 | 0.0256 | 0.2702 | 0.7583 | -0.258 | -0.129 | 296.0 | 224.0 | 204.0 | 292.0 | 132.0 | 216.0 |
| J042 | chr11 | 10760321 | 10761946 | TRUE | OK | 222.8 | 0.0336 | 0.6521 | 0.9015 | -0.076 | -0.038 | 274.0 | 221.0 | 183.0 | 308.0 | 127.0 | 242.0 |
| J043 | chr11 | 10760321 | 10763430 | TRUE | OK | 4.9 | 0.0223 | 0.907 | 0.9777 | -0.066 | -0.033 | 8.0 | 4.0 | 3.0 | 5.0 | 3.0 | 7.0 |
| J044 | chr11 | 10762054 | 10763430 | TRUE | OK | 233.8 | 0.0289 | 0.6281 | 0.8935 | -0.088 | -0.044 | 285.0 | 210.0 | 216.0 | 314.0 | 139.0 | 254.0 |
| J045 | chr11 | 10763538 | 10763642 | TRUE | OK | 228.1 | 0.00885 | 0.06899 | 0.5807 | -0.303 | -0.152 | 289.0 | 231.0 | 224.0 | 261.0 | 157.0 | 221.0 |
| J046 | chr11 | 10763879 | 10764111 | TRUE | OK | 299.8 | 0.0146 | 0.443 | 0.827 | -0.138 | -0.069 | 363.0 | 285.0 | 278.0 | 307.0 | 211.0 | 371.0 |
| J047 | chr11 | 10764201 | 10764307 | TRUE | OK | 306.7 | 0.0137 | 0.07512 | 0.594 | -0.346 | -0.173 | 403.0 | 312.0 | 299.0 | 325.0 | 196.0 | 327.0 |
| J048 | chr11 | 10764436 | 10764547 | TRUE | OK | 306.9 | 0.00945 | 0.4719 | 0.8374 | -0.111 | -0.055 | 367.0 | 317.0 | 258.0 | 357.0 | 226.0 | 336.0 |
| J049 | chr11 | 10764731 | 10766401 | TRUE | OK | 326.5 | 0.00964 | 0.1648 | 0.7 | -0.229 | -0.115 | 366.0 | 336.0 | 330.0 | 363.0 | 228.0 | 348.0 |
| J050 | chr11 | 10766490 | 10767805 | TRUE | OK | 332.2 | 0.00648 | 0.02915 | 0.4473 | -0.317 | -0.158 | 375.0 | 363.0 | 341.0 | 345.0 | 237.0 | 344.0 |
| J051 | chr11 | 10767991 | 10768073 | TRUE | OK | 410.5 | 0.00345 | 0.128 | 0.668 | -0.169 | -0.084 | 483.0 | 435.0 | 362.0 | 438.0 | 330.0 | 437.0 |
| J052 | chr11 | 10768161 | 10768342 | TRUE | OK | 409.4 | 0.00244 | 0.003646 | 0.1698 | -0.291 | -0.146 | 512.0 | 426.0 | 389.0 | 417.0 | 323.0 | 413.0 |
| J053 | chr11 | 10768491 | 10770209 | TRUE | OK | 373.9 | 0.000931 | 0.0006756 | 0.06062 | -0.271 | -0.136 | 463.0 | 399.0 | 343.0 | 374.0 | 325.0 | 360.0 |
| J054 | chr11 | 10770326 | 10770486 | TRUE | OK | 432.6 | 0.000984 | 0.9988 | 1 | 0.003 | 0.002 | 470.0 | 434.0 | 368.0 | 489.0 | 397.0 | 454.0 |
| J055 | chr11 | 10770632 | 10771544 | TRUE | OK | 406.5 | 0.001 | 0.1869 | 0.7152 | 0.108 | 0.054 | 438.0 | 362.0 | 352.0 | 462.0 | 420.0 | 417.0 |
| J056 | chr11 | 10771616 | 10772519 | TRUE | OK | 336.7 | 0.00311 | 0.8423 | 0.9598 | 0.024 | 0.012 | 330.0 | 327.0 | 319.0 | 368.0 | 357.0 | 321.0 |
| J057 | chr11 | 10772655 | 10773126 | TRUE | OK | 336.0 | 0.00911 | 0.584 | 0.8781 | 0.103 | 0.052 | 360.0 | 298.0 | 294.0 | 312.0 | 409.0 | 348.0 |
| J058 | chr11 | 10773273 | 10774011 | TRUE | OK | 342.3 | 0.0172 | 0.1247 | 0.6649 | 0.376 | 0.188 | 312.0 | 308.0 | 256.0 | 364.0 | 493.0 | 320.0 |
| J059 | chr11 | 10774169 | 10775206 | TRUE | OK | 613.3 | 0.0163 | 0.649 | 0.9005 | 0.121 | 0.061 | 614.0 | 598.0 | 515.0 | 599.0 | 807.0 | 551.0 |
| J060 | chr11 | 10775303 | 10775520 | TRUE | OK | 682.4 | 0.0113 | 0.6728 | 0.9087 | 0.091 | 0.046 | 734.0 | 627.0 | 586.0 | 668.0 | 850.0 | 642.0 |
| J061 | chr11 | 10775633 | 10778678 | TRUE | OK | 607.3 | 0.0104 | 0.7121 | 0.9211 | 0.078 | 0.039 | 634.0 | 578.0 | 525.0 | 591.0 | 750.0 | 574.0 |
| J062 | chr11 | 10775633 | 10783289 | FALSE | ALL_ZERO | 0.0 | NA | NA | NA | NA | NA | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 |
| J063 | chr11 | 10783374 | 10792094 | FALSE | ALL_ZERO | 0.0 | NA | NA | NA | NA | NA | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 |
| J064 | chr11 | 10792302 | 10801454 | FALSE | ALL_ZERO | 0.0 | NA | NA | NA | NA | NA | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 |
| N065 | chr11 | 10797881 | 10798991 | TRUE | OK | 6306.4 | 2.08 | 0.9867 | 0.9974 | -0.724 | -0.355 | 7212.0 | 6069.0 | 5627.0 | 6164.0 | 7013.0 | 5952.0 |
| N066 | chr11 | 10799062 | 10799212 | TRUE | OK | 15.0 | 0.0502 | 0.5668 | 0.8721 | 0.279 | 0.140 | 19.0 | 6.0 | 15.0 | 24.0 | 10.0 | 17.0 |
| N067 | chr11 | 10799113 | 10799212 | TRUE | OK | 6278.5 | 1.75 | 0.2528 | 0.7506 | -1.975 | -0.966 | 7758.0 | 6386.0 | 5673.0 | 6599.0 | 5651.0 | 5951.0 |
| N068 | chr11 | 10799424 | 10799551 | TRUE | OK | 6775.6 | 0.00339 | 3.43e-303 | 7.54e-298 | -33.841 | -5.582 | 8299.0 | 6846.0 | 6461.0 | 6772.0 | 6053.0 | 6546.0 |
| N069 | chr11 | 10799609 | 10800089 | TRUE | OK | 63.6 | 0.00681 | 0.004339 | 0.1877 | -0.582 | -0.291 | 66.0 | 78.0 | 79.0 | 50.0 | 55.0 | 53.0 |
| N070 | chr11 | 10799756 | 10800089 | TRUE | OK | 6661.4 | 1.47 | 0.001123 | 0.084 | -5.375 | -2.401 | 8015.0 | 6716.0 | 6412.0 | 6636.0 | 5859.0 | 6623.0 |
| N071 | chr11 | 10799756 | 10800243 | TRUE | OK | 20.0 | 0.00716 | 0.5256 | 0.8571 | -0.188 | -0.094 | 28.0 | 15.0 | 20.0 | 18.0 | 21.0 | 19.0 |
| N072 | chr11 | 10800168 | 10800243 | TRUE | OK | 23.2 | 0.00525 | 0.3735 | 0.8 | -0.237 | -0.119 | 27.0 | 22.0 | 25.0 | 27.0 | 20.0 | 19.0 |
| N073 | chr11 | 10800348 | 10800431 | TRUE | OK | 6762.4 | 2.28 | 0.278 | 0.7618 | -3.355 | -1.569 | 8703.0 | 6755.0 | 5963.0 | 7524.0 | 5394.0 | 6710.0 |
| N074 | chr11 | 10800647 | 10800730 | FALSE | ALL_ZERO | 8614.8 | NA | NA | NA | NA | NA | 10021.0 | 8880.0 | 8297.0 | 9047.0 | 7199.0 | 8597.0 |
| N075 | chr11 | 10800835 | 10800961 | TRUE | OK | 7852.2 | 5.99 | 0.209 | 0.7286 | -33.058 | -5.155 | 9967.0 | 8497.0 | 7737.0 | 8417.0 | 5535.0 | 7443.0 |
| N076 | chr11 | 10801087 | 10801660 | TRUE | OK | 5938.5 | 1.89 | 0.2415 | 0.7458 | -2.214 | -1.091 | 7730.0 | 6028.0 | 5692.0 | 6327.0 | 4427.0 | 5820.0 |
| N077 | chr11 | 10801087 | 10802048 | TRUE | OK | 1312.3 | 0.0107 | 0.003124 | 0.1561 | -0.506 | -0.253 | 1772.0 | 1396.0 | 1285.0 | 1399.0 | 907.0 | 1213.0 |
| Color Codes | |||||
|---|---|---|---|---|---|
| NO TEST | p > 0.05 | p < 0.05 | p < 0.005 | p < 5e-04 | p < 5e-05 |
| Gene ENSG00000198730.9 | |||||||
|---|---|---|---|---|---|---|---|
| expr | exprTX | normCt | normCtTX | rExpr | rExprTX | rawCt | rawCtTX |
| PLOT | PLOT | PLOT | PLOT | PLOT | PLOT | PLOT | PLOT |
| TABLE | TABLE | TABLE | TABLE | TABLE | TABLE | TABLE | TABLE |