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Normalized Counts Table (ENSG00000198730.9)

binID	chr	start	end	testable	status	baseMean	dispersion	pvalue	padjust	log2FC (mutant/control)	log2FCvst (mutant/control)	Normalized Coverage Counts
												MCF10A-parental-DMSO-1	MCF10A-parental-DMSO-2	MCF10A-parental-DMSO-3	MCF10A-KI-DMSO-7	MCF10A-KI-DMSO-8	MCF10A-KI-DMSO-9
E001	chr11	10751245	10751451	TRUE	OK	408.5	0.034	0.3919	0.8068	-0.206	-0.103	447.0	437.5	368.0	507.0	233.6	458.0
E002	chr11	10751451	10751457	TRUE	OK	259.2	0.0371	0.2087	0.7284	-0.344	-0.172	300.2	285.1	246.1	320.2	134.1	269.3
E003	chr11	10752671	10752770	TRUE	OK	397.5	0.0395	0.2065	0.727	-0.348	-0.174	454.6	433.5	385.8	490.2	203.2	417.6
E004	chr11	10754957	10755197	TRUE	OK	680.4	0.0238	0.1841	0.7136	-0.299	-0.150	721.6	726.5	691.7	824.2	423.2	695.0
E005	chr11	10755677	10755795	TRUE	OK	516.4	0.0192	0.1836	0.7133	-0.275	-0.137	529.7	544.4	542.1	621.6	334.2	526.5
E006	chr11	10756748	10756838	TRUE	OK	349.1	0.0259	0.2137	0.7317	-0.291	-0.145	393.2	353.4	353.6	435.8	209.5	349.0
E007	chr11	10760172	10760321	TRUE	OK	421.3	0.0321	0.4568	0.8317	-0.161	-0.081	461.5	405.8	405.7	562.3	251.4	440.8
E008	chr11	10761946	10762054	TRUE	OK	319.6	0.0266	0.5846	0.8784	-0.098	-0.049	338.6	299.9	308.2	427.9	203.2	339.9
E009	chr11	10763430	10763538	TRUE	OK	357.6	0.019	0.4094	0.814	-0.157	-0.078	364.2	345.4	370.3	450.7	239.9	375.2
E010	chr11	10763642	10763734	TRUE	OK	331.6	0.0119	0.2174	0.7337	-0.217	-0.108	350.6	323.7	347.0	376.5	236.7	355.1
E011	chr11	10763734	10763879	TRUE	OK	458.7	0.0126	0.461	0.8335	-0.122	-0.061	473.4	431.6	463.4	488.2	345.7	549.7
E012	chr11	10764111	10764201	TRUE	OK	442.8	0.017	0.2424	0.7462	-0.233	-0.117	483.6	429.6	455.6	464.5	302.7	520.5
E013	chr11	10764307	10764436	TRUE	OK	521.6	0.0123	0.2713	0.7587	-0.190	-0.095	552.7	515.7	521.0	581.1	381.3	578.0
E014	chr11	10764547	10764731	TRUE	OK	624.5	0.011	0.2269	0.7389	-0.198	-0.099	612.4	642.4	651.8	697.7	459.9	682.9
E015	chr11	10766333	10766401	FALSE	LOW_COUNTS_INDEP_FILTER	1.6	0.0796	0.9619	NA	NA	NA	2.6	2.0	0.0	2.0	1.0	2.0
E016	chr11	10766401	10766490	TRUE	OK	479.9	0.0115	0.1097	0.6481	-0.280	-0.140	460.6	502.8	542.1	519.8	340.4	513.4
E017	chr11	10767050	10767805	TRUE	OK	25.5	0.0105	0.004096	0.1817	0.854	0.427	10.2	17.8	24.4	34.6	35.6	30.3
E018	chr11	10767805	10767991	TRUE	OK	698.4	0.00409	0.06028	0.5606	-0.212	-0.106	675.6	728.5	736.1	725.4	579.3	745.4
E019	chr11	10768073	10768161	TRUE	OK	572.0	0.00492	0.09685	0.6309	-0.203	-0.102	588.6	578.0	583.1	602.9	467.2	612.3
E020	chr11	10768342	10768459	TRUE	OK	641.0	0.0014	0.001941	0.1189	-0.243	-0.121	670.4	660.2	651.8	634.5	583.5	645.6
E021	chr11	10768459	10768476	TRUE	OK	426.3	0.00158	0.003207	0.1583	-0.259	-0.130	456.3	442.4	429.0	412.1	398.1	419.6
E022	chr11	10768476	10768491	TRUE	OK	415.8	0.00163	0.005928	0.2213	-0.245	-0.123	443.5	432.5	413.5	411.1	383.4	410.5
E023	chr11	10770209	10770326	TRUE	OK	655.7	0.000925	0.4687	0.8364	-0.049	-0.024	636.3	637.4	634.1	693.8	655.8	676.8
E024	chr11	10770486	10770632	TRUE	OK	704.2	0.00103	0.4259	0.8205	0.059	0.030	635.5	670.1	674.0	801.5	718.6	725.3
E025	chr11	10771544	10771616	TRUE	OK	534.2	0.00128	0.1335	0.6734	0.122	0.061	465.7	480.1	524.3	594.9	583.5	556.8
E026	chr11	10772506	10772519	TRUE	OK	6.6	0.0192	0.2035	0.7252	0.667	0.334	5.1	4.9	4.4	9.9	6.3	9.1
E027	chr11	10772519	10772655	TRUE	OK	561.6	0.00421	0.3469	0.7899	0.115	0.057	485.3	510.7	552.1	576.2	672.5	572.9
E028	chr11	10773126	10773273	TRUE	OK	633.0	0.0135	0.2571	0.7522	0.245	0.122	529.7	557.3	580.9	617.7	885.2	627.4
E029	chr11	10774011	10774169	TRUE	OK	877.1	0.0176	0.407	0.813	0.209	0.105	728.4	824.5	793.7	864.7	1239.2	812.0
E030	chr11	10774169	10774309	TRUE	OK	5.2	0.197	0.6704	0.9078	0.474	0.237	3.4	7.9	1.1	11.9	1.0	6.1
E031	chr11	10775206	10775303	TRUE	OK	948.0	0.0143	0.5033	0.849	0.153	0.077	819.7	888.8	876.9	939.9	1281.1	881.6
E032	chr11	10775520	10775633	TRUE	OK	921.9	0.0116	0.6712	0.9081	0.091	0.045	823.1	843.3	899.0	901.3	1196.3	868.5
E033	chr11	10778678	10779746	TRUE	OK	1908.3	0.0165	0.2735	0.7598	0.248	0.124	1636.9	1724.2	1750.4	1909.4	2553.9	1875.2
E034	chr11	10783289	10783374	FALSE	ALL_ZERO	0.0	NA	NA	NA	NA	NA	0.0	0.0	0.0	0.0	0.0	0.0
E035	chr11	10792094	10792302	FALSE	ALL_ZERO	0.0	NA	NA	NA	NA	NA	0.0	0.0	0.0	0.0	0.0	0.0
E036	chr11	10801454	10801625	TRUE	OK	34.9	0.0067	0.9701	0.9936	0.013	0.007	38.4	28.7	32.1	42.5	29.3	38.3
J037	chr11	10751457	10752671	TRUE	OK	250.8	0.0376	0.2051	0.7262	-0.354	-0.177	292.6	275.2	239.4	308.3	132.0	257.2
J038	chr11	10752770	10754957	TRUE	OK	249.5	0.043	0.1405	0.6796	-0.442	-0.221	291.7	287.0	246.1	305.4	120.5	246.1
J039	chr11	10755197	10755677	TRUE	OK	368.0	0.0146	0.2244	0.7376	-0.226	-0.113	366.8	386.0	383.6	445.7	255.6	370.2
J040	chr11	10755795	10756748	TRUE	OK	261.4	0.0321	0.2274	0.7391	-0.312	-0.156	300.2	266.3	263.8	320.2	145.6	272.3
J041	chr11	10756838	10760172	TRUE	OK	224.2	0.0256	0.2702	0.7583	-0.258	-0.129	252.5	221.7	226.1	288.6	138.3	217.9
J042	chr11	10760321	10761946	TRUE	OK	222.8	0.0336	0.6521	0.9015	-0.076	-0.038	233.7	218.7	202.9	304.4	133.0	244.1
J043	chr11	10760321	10763430	TRUE	OK	4.9	0.0223	0.907	0.9777	-0.066	-0.033	6.8	4.0	3.3	4.9	3.1	7.1
J044	chr11	10762054	10763430	TRUE	OK	233.8	0.0289	0.6281	0.8935	-0.088	-0.044	243.1	207.9	239.4	310.3	145.6	256.2
J045	chr11	10763538	10763642	TRUE	OK	228.1	0.00885	0.06899	0.5807	-0.303	-0.152	246.5	228.6	248.3	257.9	164.5	222.9
J046	chr11	10763879	10764111	TRUE	OK	299.8	0.0146	0.443	0.827	-0.138	-0.069	309.6	282.1	308.2	303.4	221.0	374.2
J047	chr11	10764201	10764307	TRUE	OK	306.7	0.0137	0.07512	0.594	-0.346	-0.173	343.7	308.8	331.5	321.2	205.3	329.8
J048	chr11	10764436	10764547	TRUE	OK	306.9	0.00945	0.4719	0.8374	-0.111	-0.055	313.0	313.8	286.0	352.8	236.7	338.9
J049	chr11	10764731	10766401	TRUE	OK	326.5	0.00964	0.1648	0.7	-0.229	-0.115	312.2	332.6	365.8	358.7	238.8	351.0
J050	chr11	10766490	10767805	TRUE	OK	332.2	0.00648	0.02915	0.4473	-0.317	-0.158	319.9	359.3	378.0	341.0	248.3	347.0
J051	chr11	10767991	10768073	TRUE	OK	410.5	0.00345	0.128	0.668	-0.169	-0.084	412.0	430.6	401.3	432.9	345.7	440.8
J052	chr11	10768161	10768342	TRUE	OK	409.4	0.00244	0.003646	0.1698	-0.291	-0.146	436.7	421.7	431.2	412.1	338.4	416.6
J053	chr11	10768491	10770209	TRUE	OK	373.9	0.000931	0.0006756	0.06062	-0.271	-0.136	394.9	394.9	380.2	369.6	340.4	363.1
J054	chr11	10770326	10770486	TRUE	OK	432.6	0.000984	0.9988	1	0.003	0.002	400.9	429.6	407.9	483.3	415.9	458.0
J055	chr11	10770632	10771544	TRUE	OK	406.5	0.001	0.1869	0.7152	0.108	0.054	373.6	358.3	390.2	456.6	440.0	420.6
J056	chr11	10771616	10772519	TRUE	OK	336.7	0.00311	0.8423	0.9598	0.024	0.012	281.5	323.7	353.6	363.7	374.0	323.8
J057	chr11	10772655	10773126	TRUE	OK	336.0	0.00911	0.584	0.8781	0.103	0.052	307.1	295.0	325.9	308.3	428.4	351.0
J058	chr11	10773273	10774011	TRUE	OK	342.3	0.0172	0.1247	0.6649	0.376	0.188	266.1	304.9	283.8	359.7	516.4	322.8
J059	chr11	10774169	10775206	TRUE	OK	613.3	0.0163	0.649	0.9005	0.121	0.061	523.7	591.9	570.9	592.0	845.4	555.8
J060	chr11	10775303	10775520	TRUE	OK	682.4	0.0113	0.6728	0.9087	0.091	0.046	626.1	620.6	649.6	660.2	890.4	647.6
J061	chr11	10775633	10778678	TRUE	OK	607.3	0.0104	0.7121	0.9211	0.078	0.039	540.8	572.1	582.0	584.1	785.6	579.0
J062	chr11	10775633	10783289	FALSE	ALL_ZERO	0.0	NA	NA	NA	NA	NA	0.0	0.0	0.0	0.0	0.0	0.0
J063	chr11	10783374	10792094	FALSE	ALL_ZERO	0.0	NA	NA	NA	NA	NA	0.0	0.0	0.0	0.0	0.0	0.0
J064	chr11	10792302	10801454	FALSE	ALL_ZERO	0.0	NA	NA	NA	NA	NA	0.0	0.0	0.0	0.0	0.0	0.0
N065	chr11	10797881	10798991	TRUE	OK	6306.4	2.08	0.9867	0.9974	-0.724	-0.355	6151.6	6007.1	6237.8	6091.8	7346.3	6003.8
N066	chr11	10799062	10799212	TRUE	OK	15.0	0.0502	0.5668	0.8721	0.279	0.140	16.2	5.9	16.6	23.7	10.5	17.1
N067	chr11	10799113	10799212	TRUE	OK	6278.5	1.75	0.2528	0.7506	-1.975	-0.966	6617.4	6320.9	6288.8	6521.7	5919.6	6002.8
N068	chr11	10799424	10799551	TRUE	OK	6775.6	0.00339	3.43e-303	7.54e-298	-33.841	-5.582	7078.8	6776.2	7162.3	6692.7	6340.7	6603.0
N069	chr11	10799609	10800089	TRUE	OK	63.6	0.00681	0.004339	0.1877	-0.582	-0.291	56.3	77.2	87.6	49.4	57.6	53.5
N070	chr11	10799756	10800089	TRUE	OK	6661.4	1.47	0.001123	0.084	-5.375	-2.401	6836.6	6647.5	7108.0	6558.3	6137.4	6680.6
N071	chr11	10799756	10800243	TRUE	OK	20.0	0.00716	0.5256	0.8571	-0.188	-0.094	23.9	14.8	22.2	17.8	22.0	19.2
N072	chr11	10800168	10800243	TRUE	OK	23.2	0.00525	0.3735	0.8	-0.237	-0.119	23.0	21.8	27.7	26.7	21.0	19.2
N073	chr11	10800348	10800431	TRUE	OK	6762.4	2.28	0.278	0.7618	-3.355	-1.569	7423.4	6686.1	6610.2	7435.8	5650.3	6768.4
N074	chr11	10800647	10800730	FALSE	ALL_ZERO	8614.8	NA	NA	NA	NA	NA	8547.6	8789.5	9197.6	8941.0	7541.1	8671.8
N075	chr11	10800835	10800961	TRUE	OK	7852.2	5.99	0.209	0.7286	-33.058	-5.155	8501.6	8410.4	8576.8	8318.4	5798.1	7507.8
N076	chr11	10801087	10801660	TRUE	OK	5938.5	1.89	0.2415	0.7458	-2.214	-1.091	6593.5	5966.5	6309.8	6252.9	4637.4	5870.6
N077	chr11	10801087	10802048	TRUE	OK	1312.3	0.0107	0.003124	0.1561	-0.506	-0.253	1511.5	1381.8	1424.5	1382.6	950.1	1223.6

Color Codes
NO TEST	p > 0.05	p < 0.05	p < 0.005	p < 5e-04	p < 5e-05

Gene ENSG00000198730.9
expr	exprTX	normCt	normCtTX	rExpr	rExprTX	rawCt	rawCtTX
PLOT	PLOT	PLOT	PLOT	PLOT	PLOT	PLOT	PLOT
TABLE	TABLE	TABLE	TABLE	TABLE	TABLE	TABLE	TABLE