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binID | chr | start | end | testable | status | baseMean | dispersion | pvalue | padjust | log2FC (mutant/control) | log2FCvst (mutant/control) | Mean Normalized Coverage Counts | |
control | mutant | ||||||||||||
E001 | chr21 | 45493571 | 45496379 | TRUE | OK | 148.4 | 0.00997 | 1.032e-14 | 2.12e-11 | -1.549 | -0.774 | 205.5 | 92.0 |
E002 | chr21 | 45498200 | 45498345 | FALSE | LOW_COUNTS_INDEP_FILTER | 0.3 | 0.361 | 0.2104 | NA | NA | NA | NA | NA |
E003 | chr21 | 45498345 | 45498612 | FALSE | ALL_ZERO | 0.0 | NA | NA | NA | NA | NA | NA | NA |
E004 | chr21 | 45502512 | 45502969 | FALSE | LOW_COUNTS_INDEP_FILTER | 2.5 | 0.058 | 0.06766 | NA | NA | NA | NA | NA |
E005 | chr21 | 45503932 | 45504121 | TRUE | OK | 70.8 | 0.00292 | 2.164e-18 | 7.207e-15 | -1.511 | -0.755 | 97.8 | 44.0 |
E006 | chr21 | 45512361 | 45512564 | TRUE | OK | 90.5 | 0.0141 | 1.762e-06 | 0.0005782 | -1.137 | -0.568 | 114.8 | 66.8 |
E007 | chr21 | 45512564 | 45512824 | TRUE | OK | 133.4 | 0.00522 | 0.1002 | 0.6355 | -0.264 | -0.132 | 130.3 | 137.1 |
E008 | chr21 | 45512824 | 45512898 | TRUE | OK | 104.4 | 0.0132 | 0.352 | 0.792 | -0.197 | -0.098 | 99.7 | 109.6 |
E009 | chr21 | 45512898 | 45513418 | TRUE | OK | 267.6 | 0.0144 | 0.08707 | 0.6156 | -0.326 | -0.163 | 265.0 | 269.8 |
E010 | chr21 | 45513418 | 45513558 | TRUE | OK | 146.5 | 0.00872 | 0.2139 | 0.7319 | -0.225 | -0.113 | 140.8 | 152.1 |
E011 | chr21 | 45513558 | 45514714 | TRUE | OK | 353.0 | 0.00829 | 0.009041 | 0.2741 | 0.446 | 0.223 | 265.5 | 440.8 |
E012 | chr21 | 45514714 | 45514895 | TRUE | OK | 220.2 | 0.00863 | 0.0003421 | 0.03815 | 0.651 | 0.325 | 150.8 | 289.6 |
E013 | chr21 | 45514895 | 45515133 | TRUE | OK | 372.3 | 0.0126 | 0.1513 | 0.6894 | 0.311 | 0.155 | 294.9 | 449.5 |
E014 | chr21 | 45515133 | 45515152 | TRUE | OK | 203.4 | 0.0131 | 0.4752 | 0.8385 | 0.163 | 0.082 | 169.9 | 237.3 |
E015 | chr21 | 45515152 | 45515517 | TRUE | OK | 580.3 | 0.00343 | 0.000418 | 0.04386 | 0.397 | 0.199 | 449.3 | 711.5 |
E016 | chr21 | 45515517 | 45515639 | TRUE | OK | 357.3 | 0.00133 | 0.005968 | 0.2221 | 0.245 | 0.122 | 290.2 | 424.5 |
E017 | chr21 | 45515639 | 45515768 | TRUE | OK | 404.3 | 0.0019 | 0.05339 | 0.5427 | 0.182 | 0.091 | 336.4 | 472.3 |
E018 | chr21 | 45515768 | 45516140 | TRUE | OK | 731.7 | 0.00445 | 0.2942 | 0.7688 | 0.121 | 0.061 | 624.5 | 838.6 |
E019 | chr21 | 45525816 | 45525958 | TRUE | OK | 462.4 | 0.00426 | 0.6104 | 0.8871 | -0.066 | -0.033 | 419.3 | 505.8 |
E020 | chr21 | 45530769 | 45530971 | TRUE | OK | 505.4 | 0.00272 | 0.8771 | 0.9697 | -0.021 | -0.011 | 451.7 | 559.8 |
E021 | chr21 | 45531388 | 45531541 | TRUE | OK | 429.8 | 0.00576 | 0.6495 | 0.9006 | 0.059 | 0.029 | 373.9 | 486.5 |
E022 | chr21 | 45531541 | 45531790 | TRUE | OK | 426.8 | 0.0175 | 0.7231 | 0.9247 | -0.082 | -0.041 | 389.4 | 465.0 |
E023 | chr21 | 45531790 | 45531873 | TRUE | OK | 236.3 | 0.0155 | 0.3652 | 0.7968 | -0.200 | -0.100 | 225.1 | 248.2 |
E024 | chr21 | 45531873 | 45532148 | TRUE | OK | 388.0 | 0.0124 | 0.1402 | 0.6794 | -0.286 | -0.143 | 378.4 | 397.9 |
E025 | chr21 | 45534537 | 45534706 | TRUE | OK | 7.6 | 0.118 | 0.5915 | 0.8805 | -0.421 | -0.211 | 7.9 | 7.4 |
E026 | chr21 | 45535983 | 45536528 | TRUE | OK | 15.4 | 0.0291 | 0.6289 | 0.8937 | 0.175 | 0.088 | 12.9 | 18.2 |
E027 | chr21 | 45537770 | 45537777 | TRUE | OK | 165.2 | 0.00924 | 0.2908 | 0.7673 | -0.197 | -0.098 | 157.4 | 173.5 |
E028 | chr21 | 45537777 | 45537933 | TRUE | OK | 312.0 | 0.00702 | 0.5779 | 0.8759 | 0.084 | 0.042 | 268.6 | 355.6 |
E029 | chr21 | 45537933 | 45538008 | TRUE | OK | 197.4 | 0.00905 | 0.3367 | 0.786 | 0.168 | 0.084 | 164.5 | 230.5 |
E030 | chr21 | 45541786 | 45541838 | TRUE | OK | 10.4 | 0.014 | 0.1546 | 0.6922 | -0.593 | -0.297 | 11.4 | 9.5 |
E031 | chr21 | 45542367 | 45542440 | TRUE | OK | 116.0 | 0.00947 | 0.4289 | 0.8216 | 0.149 | 0.074 | 97.2 | 134.8 |
E032 | chr21 | 45542440 | 45542471 | TRUE | OK | 12.3 | 0.0137 | 0.9349 | 0.985 | -0.035 | -0.018 | 11.0 | 13.5 |
E033 | chr21 | 45543776 | 45543859 | FALSE | ALL_ZERO | 0.0 | NA | NA | NA | NA | NA | NA | NA |
E034 | chr21 | 45544136 | 45544400 | FALSE | ALL_ZERO | 0.0 | NA | NA | NA | NA | NA | NA | NA |
E035 | chr21 | 45544400 | 45544402 | FALSE | ALL_ZERO | 0.0 | NA | NA | NA | NA | NA | NA | NA |
E036 | chr21 | 45544402 | 45544411 | FALSE | ALL_ZERO | 0.0 | NA | NA | NA | NA | NA | NA | NA |
E037 | chr21 | 45562220 | 45562741 | FALSE | ALL_ZERO | 0.0 | NA | NA | NA | NA | NA | NA | NA |
E038 | chr21 | 45562741 | 45562957 | FALSE | ALL_ZERO | 0.0 | NA | NA | NA | NA | NA | NA | NA |
E039 | chr21 | 45562957 | 45563115 | FALSE | ALL_ZERO | 0.0 | NA | NA | NA | NA | NA | NA | NA |
E040 | chr21 | 45573240 | 45573365 | FALSE | ALL_ZERO | 0.0 | NA | NA | NA | NA | NA | NA | NA |
J041 | chr21 | 45496379 | 45498345 | FALSE | ALL_ZERO | 0.0 | NA | NA | NA | NA | NA | NA | NA |
J042 | chr21 | 45498612 | 45525816 | FALSE | ALL_ZERO | 0.0 | NA | NA | NA | NA | NA | NA | NA |
J043 | chr21 | 45502969 | 45503932 | FALSE | ALL_ZERO | 0.0 | NA | NA | NA | NA | NA | NA | NA |
J044 | chr21 | 45512898 | 45513418 | FALSE | LOW_COUNTS_INDEP_FILTER | 1.8 | 0.0647 | 0.08556 | NA | NA | NA | NA | NA |
J045 | chr21 | 45513558 | 45514895 | TRUE | OK | 5.6 | 0.0168 | 0.01674 | 0.3616 | -1.332 | -0.666 | 7.4 | 3.7 |
J046 | chr21 | 45515152 | 45515639 | FALSE | LOW_COUNTS_INDEP_FILTER | 0.5 | 0.164 | 0.7012 | NA | NA | NA | NA | NA |
J047 | chr21 | 45515152 | 45525816 | TRUE | OK | 9.1 | 0.109 | 0.5566 | 0.8682 | -0.397 | -0.199 | 9.2 | 8.8 |
J048 | chr21 | 45516140 | 45525816 | TRUE | OK | 278.9 | 0.00693 | 0.3165 | 0.7778 | -0.160 | -0.080 | 261.6 | 296.5 |
J049 | chr21 | 45525958 | 45530769 | TRUE | OK | 243.3 | 0.00344 | 0.5422 | 0.863 | -0.082 | -0.041 | 222.5 | 264.9 |
J050 | chr21 | 45530971 | 45531388 | TRUE | OK | 265.1 | 0.00112 | 0.4916 | 0.8444 | 0.061 | 0.031 | 230.1 | 300.2 |
J051 | chr21 | 45532148 | 45534537 | FALSE | LOW_COUNTS_INDEP_FILTER | 0.7 | 0.129 | 0.03319 | NA | NA | NA | NA | NA |
J052 | chr21 | 45532148 | 45537770 | TRUE | OK | 147.0 | 0.00472 | 0.1883 | 0.7162 | -0.203 | -0.102 | 140.5 | 154.0 |
J053 | chr21 | 45536528 | 45537770 | FALSE | ALL_ZERO | 0.0 | NA | NA | NA | NA | NA | NA | NA |
J054 | chr21 | 45538008 | 45541786 | FALSE | LOW_COUNTS_INDEP_FILTER | 2.8 | 0.0418 | 0.145 | NA | NA | NA | NA | NA |
J055 | chr21 | 45538008 | 45542367 | TRUE | OK | 112.6 | 0.00817 | 0.3715 | 0.7993 | 0.162 | 0.081 | 93.9 | 131.4 |
J056 | chr21 | 45538008 | 45543776 | FALSE | ALL_ZERO | 0.0 | NA | NA | NA | NA | NA | NA | NA |
J057 | chr21 | 45538008 | 45544136 | FALSE | ALL_ZERO | 0.0 | NA | NA | NA | NA | NA | NA | NA |
J058 | chr21 | 45538008 | 45562741 | FALSE | ALL_ZERO | 0.0 | NA | NA | NA | NA | NA | NA | NA |
J059 | chr21 | 45543859 | 45544136 | FALSE | ALL_ZERO | 0.0 | NA | NA | NA | NA | NA | NA | NA |
J060 | chr21 | 45562957 | 45573240 | FALSE | ALL_ZERO | 0.0 | NA | NA | NA | NA | NA | NA | NA |
N061 | chr21 | 45493575 | 45494544 | TRUE | OK | 76.5 | 0.017 | 5.444e-09 | 3.699e-06 | -1.565 | -0.782 | 106.8 | 46.3 |
N062 | chr21 | 45494571 | 45494861 | TRUE | OK | 82.3 | 0.0124 | 4.832e-13 | 7.454e-10 | -1.719 | -0.859 | 118.5 | 46.3 |
N063 | chr21 | 45494915 | 45495357 | TRUE | OK | 95.5 | 0.00479 | 1.918e-22 | 8.972e-19 | -1.705 | -0.852 | 137.3 | 54.4 |
N064 | chr21 | 45495432 | 45496499 | TRUE | OK | 72.9 | 0.0114 | 8.884e-11 | 9.435e-08 | -1.521 | -0.760 | 101.4 | 45.3 |
N065 | chr21 | 45496568 | 45497049 | TRUE | OK | 74.0 | 0.00591 | 4.93e-17 | 1.372e-13 | -1.645 | -0.822 | 105.5 | 43.3 |
N066 | chr21 | 45497092 | 45497598 | TRUE | OK | 65.0 | 0.00246 | 1.175e-21 | 5.164e-18 | -1.682 | -0.841 | 93.2 | 37.2 |
N067 | chr21 | 45497661 | 45504010 | TRUE | OK | 58.5 | 0.00246 | 1.191e-19 | 4.593e-16 | -1.658 | -0.829 | 83.6 | 33.8 |
N068 | chr21 | 45504054 | 45504415 | TRUE | OK | 59.0 | 0.00277 | 9.918e-15 | 2.047e-11 | -1.412 | -0.706 | 79.8 | 38.2 |
N069 | chr21 | 45504556 | 45505133 | TRUE | OK | 67.1 | 0.00559 | 1.323e-07 | 6.336e-05 | -1.020 | -0.510 | 82.4 | 51.7 |
N070 | chr21 | 45505278 | 45505357 | TRUE | OK | 33.8 | 0.0525 | 0.01704 | 0.3641 | -1.069 | -0.535 | 42.5 | 25.6 |
N071 | chr21 | 45505431 | 45505837 | TRUE | OK | 23.9 | 0.0301 | 4.157e-05 | 0.007624 | -1.602 | -0.801 | 34.0 | 14.2 |
N072 | chr21 | 45505966 | 45507560 | TRUE | OK | 46.7 | 0.00813 | 1.094e-07 | 5.392e-05 | -1.243 | -0.621 | 60.5 | 32.5 |
N073 | chr21 | 45507593 | 45509355 | TRUE | OK | 51.9 | 0.00463 | 1.439e-08 | 8.887e-06 | -1.151 | -0.575 | 65.7 | 37.5 |
N074 | chr21 | 45509601 | 45510063 | TRUE | OK | 32.8 | 0.00478 | 2.129e-08 | 1.253e-05 | -1.357 | -0.679 | 43.8 | 21.6 |
N075 | chr21 | 45510261 | 45511110 | TRUE | OK | 57.6 | 0.00333 | 8.062e-15 | 1.696e-11 | -1.468 | -0.734 | 78.5 | 36.2 |
N076 | chr21 | 45511226 | 45512187 | TRUE | OK | 55.3 | 0.00252 | 1.689e-10 | 1.659e-07 | -1.169 | -0.585 | 70.6 | 39.9 |
N077 | chr21 | 45532148 | 45537766 | TRUE | OK | 11.2 | 0.0482 | 0.8231 | 0.9542 | -0.096 | -0.048 | 10.3 | 12.1 |
Color Codes | |||||
---|---|---|---|---|---|
NO TEST | p > 0.05 | p < 0.05 | p < 0.005 | p < 5e-04 | p < 5e-05 |
Gene ENSG00000173638.19 | |||||||
---|---|---|---|---|---|---|---|
expr | exprTX | normCt | normCtTX | rExpr | rExprTX | rawCt | rawCtTX |
PLOT | PLOT | PLOT | PLOT | PLOT | PLOT | PLOT | PLOT |
TABLE | TABLE | TABLE | TABLE | TABLE | TABLE | TABLE | TABLE |