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binID | chr | start | end | testable | status | baseMean | dispersion | pvalue | padjust | log2FC (mutant/control) | log2FCvst (mutant/control) | Mean Normalized Coverage Counts | |
control | mutant | ||||||||||||
E001 | chr3 | 53224711 | 53224713 | TRUE | OK | 13.3 | 0.0115 | 0.3732 | 0.7999 | 0.331 | 0.166 | 11.7 | 14.9 |
E002 | chr3 | 53224713 | 53225609 | TRUE | OK | 440.3 | 0.00126 | 0.05551 | 0.5485 | 0.157 | 0.079 | 413.4 | 467.3 |
E003 | chr3 | 53225609 | 53225651 | TRUE | OK | 6.5 | 0.0435 | 0.7212 | 0.9242 | 0.192 | 0.096 | 6.1 | 7.1 |
E004 | chr3 | 53225651 | 53225656 | TRUE | OK | 4.6 | 0.0334 | 0.5372 | 0.8612 | -0.380 | -0.190 | 5.2 | 4.1 |
E005 | chr3 | 53225656 | 53225658 | TRUE | OK | 5.8 | 0.0211 | 0.4879 | 0.8431 | -0.378 | -0.189 | 6.5 | 5.1 |
E006 | chr3 | 53225658 | 53225701 | TRUE | OK | 154.7 | 0.0161 | 0.3164 | 0.7778 | 0.252 | 0.126 | 140.1 | 169.3 |
E007 | chr3 | 53225701 | 53225750 | TRUE | OK | 491.3 | 0.02 | 0.2501 | 0.7496 | 0.298 | 0.149 | 437.8 | 545.1 |
E008 | chr3 | 53225750 | 53225931 | TRUE | OK | 9099.3 | 0.0145 | 0.2142 | 0.7321 | 0.276 | 0.138 | 8294.4 | 9904.0 |
E009 | chr3 | 53225931 | 53226755 | TRUE | OK | 345.2 | 0.00617 | 6.046e-07 | 0.0002358 | 0.739 | 0.369 | 256.8 | 433.6 |
E010 | chr3 | 53226755 | 53226878 | TRUE | OK | 13471.2 | 0.0151 | 0.2983 | 0.7708 | 0.237 | 0.118 | 12510.8 | 14431.4 |
E011 | chr3 | 53226878 | 53228055 | TRUE | OK | 356.1 | 0.00195 | 1.136e-07 | 5.573e-05 | 0.514 | 0.257 | 291.5 | 421.4 |
E012 | chr3 | 53228055 | 53228149 | TRUE | OK | 11709.4 | 0.00856 | 0.5697 | 0.8732 | 0.102 | 0.051 | 11290.1 | 12128.4 |
E013 | chr3 | 53228275 | 53228359 | TRUE | OK | 10503.8 | 0.0049 | 0.895 | 0.9746 | -0.008 | -0.004 | 10450.2 | 10556.9 |
E014 | chr3 | 53228680 | 53229006 | TRUE | OK | 96.0 | 0.00604 | 0.4574 | 0.8319 | -0.128 | -0.064 | 99.5 | 92.4 |
E015 | chr3 | 53229006 | 53229137 | TRUE | OK | 10531.6 | 0.0019 | 0.1526 | 0.6906 | -0.104 | -0.052 | 10769.4 | 10294.5 |
E016 | chr3 | 53229279 | 53229436 | TRUE | OK | 10511.2 | 0.00245 | 0.3596 | 0.795 | -0.078 | -0.039 | 10670.0 | 10353.9 |
E017 | chr3 | 53229436 | 53229437 | TRUE | OK | 112.8 | 0.0033 | 6.609e-18 | 2.004e-14 | 1.315 | 0.658 | 64.0 | 161.2 |
E018 | chr3 | 53230456 | 53230621 | TRUE | OK | 12779.9 | 0.00216 | 0.9268 | 0.9828 | -0.008 | -0.004 | 12714.6 | 12846.3 |
E019 | chr3 | 53231349 | 53231356 | TRUE | OK | 50.9 | 0.0102 | 0.8064 | 0.9493 | -0.057 | -0.029 | 51.7 | 50.4 |
E020 | chr3 | 53231356 | 53231453 | TRUE | OK | 10599.4 | 0.00246 | 0.6314 | 0.8947 | 0.040 | 0.020 | 10402.0 | 10798.2 |
E021 | chr3 | 53231453 | 53231459 | TRUE | OK | 7715.7 | 0.00218 | 0.4681 | 0.8362 | 0.057 | 0.028 | 7527.2 | 7905.7 |
E022 | chr3 | 53231459 | 53231550 | TRUE | OK | 10297.5 | 0.00291 | 0.8589 | 0.9646 | 0.017 | 0.008 | 10173.7 | 10422.4 |
E023 | chr3 | 53231550 | 53232299 | TRUE | OK | 475.8 | 0.00286 | 0.5218 | 0.8559 | 0.066 | 0.033 | 462.1 | 490.7 |
E024 | chr3 | 53232299 | 53232759 | TRUE | OK | 327.8 | 0.00644 | 0.6232 | 0.8916 | -0.081 | -0.040 | 335.3 | 321.7 |
E025 | chr3 | 53232759 | 53233155 | TRUE | OK | 419.2 | 0.00242 | 0.176 | 0.7076 | -0.135 | -0.068 | 435.8 | 402.9 |
E026 | chr3 | 53233155 | 53233274 | TRUE | OK | 10088.5 | 0.00586 | 0.4318 | 0.8227 | -0.096 | -0.048 | 10296.4 | 9881.3 |
E027 | chr3 | 53233274 | 53234851 | TRUE | OK | 387.8 | 0.012 | 0.1917 | 0.7183 | 0.255 | 0.127 | 351.4 | 425.0 |
E028 | chr3 | 53234851 | 53234982 | TRUE | OK | 50.8 | 0.0321 | 0.7922 | 0.9454 | 0.119 | 0.060 | 48.4 | 53.3 |
E029 | chr3 | 53234982 | 53235019 | TRUE | OK | 7656.8 | 0.00956 | 0.2133 | 0.7315 | -0.192 | -0.096 | 8047.9 | 7266.1 |
E030 | chr3 | 53235019 | 53235064 | TRUE | OK | 7875.0 | 0.0142 | 0.1358 | 0.6753 | -0.278 | -0.139 | 8479.4 | 7271.0 |
E031 | chr3 | 53235064 | 53235116 | TRUE | OK | 7039.9 | 0.0138 | 0.1725 | 0.7053 | -0.250 | -0.125 | 7528.4 | 6551.9 |
E032 | chr3 | 53235116 | 53235148 | TRUE | OK | 6879.3 | 0.0088 | 0.4935 | 0.8451 | -0.098 | -0.049 | 7037.3 | 6722.0 |
E033 | chr3 | 53235148 | 53235160 | TRUE | OK | 6354.4 | 0.00604 | 0.7172 | 0.9228 | -0.042 | -0.021 | 6390.8 | 6318.7 |
E034 | chr3 | 53235160 | 53235174 | TRUE | OK | 6501.5 | 0.00602 | 0.8713 | 0.9681 | -0.016 | -0.008 | 6486.3 | 6517.3 |
E035 | chr3 | 53235174 | 53235607 | TRUE | OK | 292.4 | 0.00972 | 0.672 | 0.9084 | 0.075 | 0.037 | 283.2 | 302.6 |
E036 | chr3 | 53237796 | 53237820 | TRUE | OK | 310.9 | 0.00878 | 0.4741 | 0.8381 | -0.113 | -0.056 | 320.8 | 301.2 |
E037 | chr3 | 53237820 | 53237921 | TRUE | OK | 343.1 | 0.00555 | 0.3406 | 0.7873 | -0.127 | -0.064 | 355.9 | 330.8 |
E038 | chr3 | 53240250 | 53240289 | TRUE | OK | 9193.2 | 0.00395 | 0.8871 | 0.9726 | -0.013 | -0.007 | 9162.6 | 9224.0 |
E039 | chr3 | 53240289 | 53240348 | TRUE | OK | 9283.3 | 0.00309 | 0.8991 | 0.9756 | 0.012 | 0.006 | 9182.6 | 9384.3 |
E040 | chr3 | 53241131 | 53241149 | TRUE | OK | 8343.9 | 0.00227 | 0.7165 | 0.9226 | 0.029 | 0.014 | 8211.4 | 8476.4 |
E041 | chr3 | 53241149 | 53241245 | TRUE | OK | 9757.4 | 0.00457 | 0.9744 | 0.9945 | -0.002 | -0.001 | 9693.7 | 9821.9 |
E042 | chr3 | 53241894 | 53242124 | TRUE | OK | 69.2 | 0.019 | 0.5076 | 0.8506 | -0.151 | -0.076 | 72.3 | 66.0 |
E043 | chr3 | 53242124 | 53242199 | TRUE | OK | 8749.7 | 0.00965 | 0.3852 | 0.8043 | -0.135 | -0.068 | 9037.8 | 8462.2 |
E044 | chr3 | 53242199 | 53242242 | TRUE | OK | 6958.4 | 0.017 | 0.1844 | 0.7137 | -0.268 | -0.134 | 7480.8 | 6436.5 |
E045 | chr3 | 53243582 | 53243622 | TRUE | OK | 12.9 | 0.0171 | 0.2223 | 0.7364 | 0.488 | 0.244 | 10.7 | 15.2 |
E046 | chr3 | 53255835 | 53255974 | TRUE | OK | 7172.5 | 0.0168 | 0.1988 | 0.7227 | -0.258 | -0.129 | 7687.2 | 6658.1 |
E047 | chr3 | 53255974 | 53255987 | TRUE | OK | 3384.2 | 0.0153 | 0.2023 | 0.7246 | -0.246 | -0.123 | 3632.0 | 3136.8 |
E048 | chr3 | 53255987 | 53256000 | TRUE | OK | 3144.5 | 0.0151 | 0.1979 | 0.7221 | -0.247 | -0.123 | 3376.8 | 2912.7 |
E049 | chr3 | 53256000 | 53256013 | TRUE | OK | 2577.3 | 0.0152 | 0.1791 | 0.7097 | -0.261 | -0.130 | 2781.3 | 2373.6 |
E050 | chr3 | 53256013 | 53256022 | TRUE | OK | 716.2 | 0.0135 | 0.2449 | 0.7473 | -0.214 | -0.107 | 763.6 | 669.3 |
E051 | chr3 | 53256022 | 53256052 | TRUE | OK | 56.3 | 0.00637 | 0.006632 | 0.2347 | -0.557 | -0.279 | 66.6 | 45.9 |
J052 | chr3 | 53225609 | 53225750 | TRUE | OK | 109.9 | 0.00435 | 0.3862 | 0.8046 | 0.137 | 0.069 | 104.2 | 116.2 |
J053 | chr3 | 53225931 | 53226755 | TRUE | OK | 7754.8 | 0.0133 | 0.2735 | 0.7597 | 0.235 | 0.117 | 7147.4 | 8362.1 |
J054 | chr3 | 53226878 | 53228055 | TRUE | OK | 8958.2 | 0.0101 | 0.4292 | 0.8217 | 0.151 | 0.075 | 8493.6 | 9422.7 |
J055 | chr3 | 53226878 | 53228275 | FALSE | LOW_COUNTS_INDEP_FILTER | 0.2 | 0.531 | 0.547 | NA | NA | NA | NA | NA |
J056 | chr3 | 53228149 | 53228275 | TRUE | OK | 7687.0 | 0.00744 | 0.8775 | 0.9698 | 0.036 | 0.018 | 7546.7 | 7826.7 |
J057 | chr3 | 53228359 | 53229006 | TRUE | OK | 6786.4 | 0.00132 | 0.01529 | 0.3479 | -0.149 | -0.075 | 7048.7 | 6523.6 |
J058 | chr3 | 53229137 | 53229279 | TRUE | OK | 5536.0 | 0.00223 | 0.1174 | 0.6572 | -0.126 | -0.063 | 5717.5 | 5356.5 |
J059 | chr3 | 53229436 | 53230456 | TRUE | OK | 6049.3 | 0.00211 | 0.6296 | 0.8941 | -0.040 | -0.020 | 6081.2 | 6019.2 |
J060 | chr3 | 53230621 | 53231349 | FALSE | LOW_COUNTS_INDEP_FILTER | 0.6 | 0.455 | 0.972 | NA | NA | NA | NA | NA |
J061 | chr3 | 53230621 | 53231356 | TRUE | OK | 7454.7 | 0.00199 | 0.6803 | 0.9111 | -0.031 | -0.015 | 7471.6 | 7439.1 |
J062 | chr3 | 53231550 | 53233155 | TRUE | OK | 6509.1 | 0.00295 | 0.7787 | 0.9416 | 0.027 | 0.013 | 6409.1 | 6610.7 |
J063 | chr3 | 53233274 | 53234982 | TRUE | OK | 6096.3 | 0.00746 | 0.1559 | 0.6932 | -0.197 | -0.098 | 6425.9 | 5767.0 |
J064 | chr3 | 53235064 | 53240250 | TRUE | OK | 46.3 | 0.00355 | 0.02484 | 0.4221 | -0.448 | -0.224 | 53.2 | 39.5 |
J065 | chr3 | 53235116 | 53235148 | TRUE | OK | 3.3 | 0.0677 | 0.6306 | 0.8944 | 0.341 | 0.170 | 2.9 | 3.7 |
J066 | chr3 | 53235174 | 53237796 | TRUE | OK | 208.8 | 0.00898 | 0.7106 | 0.9206 | -0.057 | -0.028 | 211.4 | 206.2 |
J067 | chr3 | 53235174 | 53240250 | TRUE | OK | 5722.3 | 0.00494 | 0.8184 | 0.953 | -0.023 | -0.012 | 5722.5 | 5722.9 |
J068 | chr3 | 53237820 | 53240250 | TRUE | OK | 21.8 | 0.00712 | 0.1764 | 0.7079 | 0.392 | 0.196 | 18.8 | 25.0 |
J069 | chr3 | 53237921 | 53240250 | TRUE | OK | 62.4 | 0.013 | 0.8795 | 0.9704 | 0.052 | 0.026 | 60.9 | 64.1 |
J070 | chr3 | 53240289 | 53241149 | FALSE | ALL_ZERO | 0.0 | NA | NA | NA | NA | NA | NA | NA |
J071 | chr3 | 53240348 | 53241131 | TRUE | OK | 7871.0 | 0.00201 | 0.8314 | 0.9567 | 0.016 | 0.008 | 7776.2 | 7965.5 |
J072 | chr3 | 53241245 | 53242124 | TRUE | OK | 5763.7 | 0.00556 | 0.9819 | 0.9963 | 0.005 | 0.002 | 5714.2 | 5814.3 |
J073 | chr3 | 53242242 | 53243582 | TRUE | OK | 8.0 | 0.111 | 0.5558 | 0.8679 | 0.512 | 0.256 | 6.5 | 9.4 |
J074 | chr3 | 53242242 | 53255835 | TRUE | OK | 5989.0 | 0.0172 | 0.1584 | 0.6952 | -0.289 | -0.144 | 6485.7 | 5492.9 |
J075 | chr3 | 53243622 | 53255835 | TRUE | OK | 10.2 | 0.0636 | 0.4327 | 0.8229 | 0.509 | 0.254 | 8.4 | 12.1 |
N076 | chr3 | 53231550 | 53232738 | TRUE | OK | 54.0 | 0.00658 | 0.954 | 0.9898 | -0.013 | -0.006 | 53.4 | 53.8 |
N077 | chr3 | 53235064 | 53237796 | TRUE | OK | 17.1 | 0.00797 | 0.4561 | 0.8314 | -0.238 | -0.119 | 18.5 | 15.9 |
Color Codes | |||||
---|---|---|---|---|---|
NO TEST | p > 0.05 | p < 0.05 | p < 0.005 | p < 5e-04 | p < 5e-05 |
Gene ENSG00000163931.16 | |||||||
---|---|---|---|---|---|---|---|
expr | exprTX | normCt | normCtTX | rExpr | rExprTX | rawCt | rawCtTX |
PLOT | PLOT | PLOT | PLOT | PLOT | PLOT | PLOT | PLOT |
TABLE | TABLE | TABLE | TABLE | TABLE | TABLE | TABLE | TABLE |