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| binID | chr | start | end | testable | status | baseMean | dispersion | pvalue | padjust | log2FC (mutant/control) | log2FCvst (mutant/control) | Raw Counts | |||||
| MCF10A-parental-DMSO-1 | MCF10A-parental-DMSO-2 | MCF10A-parental-DMSO-3 | MCF10A-KI-DMSO-7 | MCF10A-KI-DMSO-8 | MCF10A-KI-DMSO-9 | ||||||||||||
| E001 | chr13 | 113399609 | 113408220 | TRUE | OK | 189.7 | 0.0109 | 1.88e-29 | 1.401e-25 | 2.797 | 1.394 | 46.0 | 54.0 | 44.0 | 401.0 | 265.0 | 320.0 |
| E002 | chr13 | 113421939 | 113422632 | TRUE | OK | 28.6 | 0.0121 | 1.233e-09 | 9.964e-07 | -1.848 | -0.924 | 31.0 | 37.0 | 20.0 | 24.0 | 30.0 | 31.0 |
| E003 | chr13 | 113422632 | 113422825 | TRUE | OK | 25.4 | 0.0121 | 5.176e-08 | 2.799e-05 | -1.720 | -0.860 | 25.0 | 36.0 | 15.0 | 25.0 | 23.0 | 30.0 |
| E004 | chr13 | 113422825 | 113422979 | TRUE | OK | 23.6 | 0.0251 | 0.002395 | 0.1347 | -1.181 | -0.591 | 27.0 | 26.0 | 7.0 | 28.0 | 27.0 | 29.0 |
| E005 | chr13 | 113424216 | 113424349 | TRUE | OK | 17.2 | 0.0265 | 0.004484 | 0.1908 | -1.201 | -0.600 | 15.0 | 22.0 | 7.0 | 16.0 | 20.0 | 24.0 |
| E006 | chr13 | 113425051 | 113425179 | TRUE | OK | 14.8 | 0.0227 | 0.0001655 | 0.02252 | -1.535 | -0.767 | 16.0 | 19.0 | 8.0 | 17.0 | 8.0 | 22.0 |
| E007 | chr13 | 113428951 | 113429092 | TRUE | OK | 13.9 | 0.0387 | 1.431e-05 | 0.003266 | -2.015 | -1.007 | 23.0 | 17.0 | 8.0 | 12.0 | 7.0 | 19.0 |
| E008 | chr13 | 113433741 | 113433867 | TRUE | OK | 14.4 | 0.0257 | 4.536e-08 | 2.489e-05 | -2.286 | -1.143 | 20.0 | 16.0 | 16.0 | 8.0 | 10.0 | 17.0 |
| E009 | chr13 | 113444424 | 113444589 | TRUE | OK | 19.3 | 0.0146 | 5.682e-12 | 7.369e-09 | -2.401 | -1.200 | 26.0 | 26.0 | 19.0 | 13.0 | 20.0 | 13.0 |
| E010 | chr13 | 113448998 | 113449142 | TRUE | OK | 6.2 | 0.165 | 0.001953 | 0.1193 | -2.553 | -1.276 | 13.0 | 5.0 | 7.0 | 3.0 | 9.0 | 1.0 |
| E011 | chr13 | 113449142 | 113449277 | TRUE | OK | 4.8 | 0.028 | 0.0005849 | 0.0552 | -2.120 | -1.060 | 4.0 | 8.0 | 5.0 | 5.0 | 4.0 | 3.0 |
| E012 | chr13 | 113453223 | 113453524 | TRUE | OK | 8.7 | 0.0471 | 0.0009367 | 0.07509 | -1.831 | -0.915 | 17.0 | 8.0 | 4.0 | 12.0 | 6.0 | 7.0 |
| J013 | chr13 | 113408220 | 113422825 | FALSE | ALL_ZERO | 0.0 | NA | NA | NA | NA | NA | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 |
| J014 | chr13 | 113422979 | 113424216 | TRUE | OK | 11.4 | 0.0146 | 0.07603 | 0.5955 | -0.782 | -0.391 | 10.0 | 12.0 | 3.0 | 13.0 | 16.0 | 15.0 |
| J015 | chr13 | 113424349 | 113425051 | TRUE | OK | 8.6 | 0.0112 | 0.0003153 | 0.03603 | -1.628 | -0.814 | 9.0 | 11.0 | 6.0 | 10.0 | 6.0 | 10.0 |
| J016 | chr13 | 113425179 | 113428951 | TRUE | OK | 8.1 | 0.0462 | 0.003849 | 0.1753 | -1.612 | -0.806 | 12.0 | 10.0 | 3.0 | 8.0 | 4.0 | 13.0 |
| J017 | chr13 | 113429092 | 113433741 | TRUE | OK | 8.3 | 0.0496 | 0.0002774 | 0.03307 | -2.027 | -1.013 | 15.0 | 8.0 | 6.0 | 6.0 | 4.0 | 12.0 |
| J018 | chr13 | 113433867 | 113444424 | TRUE | OK | 10.5 | 0.0231 | 1.677e-07 | 7.736e-05 | -2.381 | -1.190 | 13.0 | 14.0 | 12.0 | 4.0 | 9.0 | 11.0 |
| J019 | chr13 | 113444589 | 113448998 | TRUE | OK | 4.8 | 0.165 | 0.0006905 | 0.06148 | -3.006 | -1.503 | 10.0 | 4.0 | 7.0 | 1.0 | 6.0 | 1.0 |
| J020 | chr13 | 113444589 | 113453223 | FALSE | LOW_COUNTS_INDEP_FILTER | 0.5 | 0.166 | 0.1608 | NA | NA | NA | 1.0 | 1.0 | 0.0 | 1.0 | 0.0 | 0.0 |
| Color Codes | |||||
|---|---|---|---|---|---|
| NO TEST | p > 0.05 | p < 0.05 | p < 0.005 | p < 5e-04 | p < 5e-05 |
| Gene ENSG00000153531.13 | |||||||
|---|---|---|---|---|---|---|---|
| expr | exprTX | normCt | normCtTX | rExpr | rExprTX | rawCt | rawCtTX |
| PLOT | PLOT | PLOT | PLOT | PLOT | PLOT | PLOT | PLOT |
| TABLE | TABLE | TABLE | TABLE | TABLE | TABLE | TABLE | TABLE |