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binID | chr | start | end | testable | status | baseMean | dispersion | pvalue | padjust | log2FC (mutant/control) | log2FCvst (mutant/control) | Raw Counts | |||||
MCF10A-parental-DMSO-1 | MCF10A-parental-DMSO-2 | MCF10A-parental-DMSO-3 | MCF10A-KI-DMSO-7 | MCF10A-KI-DMSO-8 | MCF10A-KI-DMSO-9 | ||||||||||||
E001 | chr10 | 70098222 | 70099619 | TRUE | OK | 8.9 | 0.0154 | 0.009899 | 0.2871 | -1.177 | -0.589 | 13.0 | 14.0 | 9.0 | 7.0 | 5.0 | 6.0 |
E002 | chr10 | 70112269 | 70112270 | TRUE | OK | 7.7 | 0.0261 | 0.1064 | 0.6437 | -0.817 | -0.409 | 7.0 | 13.0 | 8.0 | 4.0 | 9.0 | 5.0 |
E003 | chr10 | 70112270 | 70114144 | TRUE | OK | 1032.4 | 0.003 | 0.1172 | 0.657 | 0.163 | 0.081 | 1021.0 | 900.0 | 871.0 | 1021.0 | 1245.0 | 1144.0 |
E004 | chr10 | 70114144 | 70114329 | TRUE | OK | 584.6 | 0.0047 | 0.9969 | 0.9998 | 0.009 | 0.004 | 666.0 | 502.0 | 488.0 | 568.0 | 728.0 | 573.0 |
E005 | chr10 | 70114774 | 70114919 | TRUE | OK | 12.8 | 0.0149 | 0.09744 | 0.6318 | -0.649 | -0.325 | 22.0 | 15.0 | 9.0 | 11.0 | 9.0 | 13.0 |
E006 | chr10 | 70114919 | 70115120 | TRUE | OK | 729.4 | 0.00237 | 0.2867 | 0.7653 | -0.098 | -0.049 | 836.0 | 663.0 | 629.0 | 733.0 | 845.0 | 694.0 |
E007 | chr10 | 70116621 | 70116774 | TRUE | OK | 916.6 | 0.00124 | 0.6975 | 0.9164 | 0.029 | 0.015 | 980.0 | 847.0 | 750.0 | 983.0 | 1041.0 | 924.0 |
E008 | chr10 | 70117811 | 70117920 | TRUE | OK | 721.4 | 0.00123 | 0.8172 | 0.9526 | 0.018 | 0.009 | 787.0 | 644.0 | 603.0 | 769.0 | 820.0 | 726.0 |
E009 | chr10 | 70118007 | 70118351 | TRUE | OK | 6.7 | 0.0194 | 0.5181 | 0.8543 | 0.328 | 0.164 | 8.0 | 6.0 | 3.0 | 8.0 | 9.0 | 7.0 |
E010 | chr10 | 70120506 | 70120599 | TRUE | OK | 733.6 | 0.00218 | 0.993 | 0.999 | -0.001 | -0.000 | 824.0 | 662.0 | 598.0 | 798.0 | 811.0 | 736.0 |
E011 | chr10 | 70121091 | 70121211 | TRUE | OK | 650.1 | 0.00329 | 0.2145 | 0.7323 | -0.138 | -0.069 | 774.0 | 584.0 | 566.0 | 692.0 | 678.0 | 635.0 |
E012 | chr10 | 70123404 | 70123520 | TRUE | OK | 848.8 | 0.00397 | 0.327 | 0.7822 | -0.117 | -0.058 | 997.0 | 793.0 | 703.0 | 917.0 | 877.0 | 846.0 |
E013 | chr10 | 70123906 | 70124097 | TRUE | OK | 626.6 | 0.00759 | 0.6072 | 0.8861 | -0.086 | -0.043 | 752.0 | 585.0 | 497.0 | 701.0 | 610.0 | 651.0 |
E014 | chr10 | 70124097 | 70124100 | TRUE | OK | 47.9 | 0.0251 | 0.5098 | 0.8515 | -0.197 | -0.099 | 48.0 | 55.0 | 42.0 | 63.0 | 32.0 | 49.0 |
E015 | chr10 | 70124100 | 70124102 | FALSE | LOW_COUNTS_INDEP_FILTER | 1.4 | 0.181 | 0.1594 | NA | NA | NA | 5.0 | 2.0 | 0.0 | 1.0 | 0.0 | 1.0 |
E016 | chr10 | 70132733 | 70132825 | TRUE | OK | 196.9 | 0.011 | 0.7087 | 0.92 | -0.076 | -0.038 | 236.0 | 190.0 | 151.0 | 217.0 | 172.0 | 228.0 |
E017 | chr10 | 70132825 | 70132934 | TRUE | OK | 18.0 | 0.0185 | 0.9887 | 0.9979 | 0.007 | 0.004 | 18.0 | 18.0 | 15.0 | 25.0 | 12.0 | 21.0 |
J018 | chr10 | 70099619 | 70114144 | FALSE | LOW_COUNTS_INDEP_FILTER | 0.8 | 0.112 | 0.6043 | NA | NA | NA | 2.0 | 0.0 | 1.0 | 1.0 | 0.0 | 1.0 |
J019 | chr10 | 70114329 | 70114919 | TRUE | OK | 316.6 | 0.00439 | 0.6197 | 0.8903 | -0.062 | -0.031 | 384.0 | 271.0 | 265.0 | 314.0 | 380.0 | 299.0 |
J020 | chr10 | 70115120 | 70116621 | TRUE | OK | 437.2 | 0.00134 | 0.4151 | 0.8164 | -0.068 | -0.034 | 486.0 | 407.0 | 373.0 | 451.0 | 507.0 | 412.0 |
J021 | chr10 | 70116774 | 70117811 | TRUE | OK | 487.0 | 0.000878 | 0.7858 | 0.9436 | 0.020 | 0.010 | 503.0 | 465.0 | 401.0 | 520.0 | 548.0 | 496.0 |
J022 | chr10 | 70117920 | 70118007 | FALSE | ALL_ZERO | 0.0 | NA | NA | NA | NA | NA | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 |
J023 | chr10 | 70117920 | 70120506 | TRUE | OK | 503.0 | 0.00148 | 0.3786 | 0.8017 | 0.075 | 0.038 | 551.0 | 445.0 | 398.0 | 553.0 | 582.0 | 506.0 |
J024 | chr10 | 70120599 | 70121091 | TRUE | OK | 385.5 | 0.00371 | 0.175 | 0.707 | -0.164 | -0.082 | 478.0 | 337.0 | 341.0 | 395.0 | 423.0 | 357.0 |
J025 | chr10 | 70121211 | 70123404 | TRUE | OK | 461.9 | 0.00275 | 0.2557 | 0.7518 | -0.124 | -0.062 | 543.0 | 432.0 | 390.0 | 497.0 | 464.0 | 467.0 |
J026 | chr10 | 70123520 | 70123906 | TRUE | OK | 500.8 | 0.00398 | 0.1228 | 0.6631 | -0.189 | -0.094 | 609.0 | 478.0 | 424.0 | 538.0 | 492.0 | 491.0 |
J027 | chr10 | 70124097 | 70132733 | TRUE | OK | 144.1 | 0.00684 | 0.6242 | 0.892 | -0.093 | -0.046 | 187.0 | 131.0 | 108.0 | 148.0 | 143.0 | 158.0 |
J028 | chr10 | 70124100 | 70132733 | TRUE | OK | 43.0 | 0.0361 | 0.5178 | 0.8542 | -0.226 | -0.113 | 40.0 | 53.0 | 38.0 | 55.0 | 26.0 | 47.0 |
N029 | chr10 | 70095753 | 70100207 | TRUE | OK | 124.5 | 0.0123 | 3.911e-09 | 2.756e-06 | -1.284 | -0.642 | 226.0 | 147.0 | 144.0 | 76.0 | 71.0 | 99.0 |
N030 | chr10 | 70100297 | 70109032 | TRUE | OK | 164.9 | 0.00356 | 3.19e-24 | 1.71e-20 | -1.428 | -0.714 | 287.0 | 199.0 | 213.0 | 100.0 | 103.0 | 104.0 |
N031 | chr10 | 70109207 | 70111517 | TRUE | OK | 203.5 | 0.00172 | 1.809e-30 | 1.42e-26 | -1.283 | -0.641 | 322.0 | 249.0 | 259.0 | 133.0 | 150.0 | 123.0 |
Color Codes | |||||
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NO TEST | p > 0.05 | p < 0.05 | p < 0.005 | p < 5e-04 | p < 5e-05 |
Gene ENSG00000042286.15 | |||||||
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expr | exprTX | normCt | normCtTX | rExpr | rExprTX | rawCt | rawCtTX |
PLOT | PLOT | PLOT | PLOT | PLOT | PLOT | PLOT | PLOT |
TABLE | TABLE | TABLE | TABLE | TABLE | TABLE | TABLE | TABLE |