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Normalized Counts Table (ENSG00000146904.9)

binID	chr	start	end	testable	status	baseMean	dispersion	pvalue	padjust	log2FC (mutant/control)	log2FCvst (mutant/control)	Normalized Coverage Counts
												MCF10A-parental-DMSO-1	MCF10A-parental-DMSO-2	MCF10A-parental-DMSO-3	MCF10A-KI-DMSO-7	MCF10A-KI-DMSO-8	MCF10A-KI-DMSO-9
E001	chr7	143390288	143390645	TRUE	OK	2148.6	0.00307	4.345e-18	1.384e-14	0.865	0.432	2156.3	1761.9	1974.3	2258.2	2506.7	2234.3
E002	chr7	143391097	143391128	TRUE	OK	169.5	0.00925	0.1492	0.6877	0.282	0.141	154.4	146.5	184.0	147.3	227.3	157.4
E003	chr7	143391128	143391391	TRUE	OK	124.9	0.00779	0.0292	0.4476	-0.390	-0.195	144.2	157.4	138.6	95.9	128.8	84.7
E004	chr7	143391391	143391410	TRUE	OK	112.3	0.00545	0.03234	0.4639	-0.356	-0.178	125.4	140.6	126.4	97.8	104.8	78.7
E005	chr7	143391410	143391535	TRUE	OK	177.0	0.00485	0.004311	0.1871	-0.419	-0.209	200.4	223.7	204.0	136.4	167.6	130.1
E006	chr7	143391619	143391775	TRUE	OK	188.1	0.00306	3.278e-06	0.0009769	-0.599	-0.299	235.4	241.5	221.7	138.4	161.3	130.1
E007	chr7	143393670	143393864	TRUE	OK	211.3	0.00218	7.15e-15	1.519e-11	-0.909	-0.454	275.5	271.2	298.2	135.4	140.4	147.3
E008	chr7	143394193	143394209	TRUE	OK	126.7	0.00594	1.661e-06	0.00055	-0.815	-0.407	163.8	142.5	191.8	72.1	90.1	99.9
E009	chr7	143394209	143394343	TRUE	OK	187.9	0.00407	6.819e-06	0.001806	-0.625	-0.313	225.2	223.7	255.0	117.6	150.8	155.3
E010	chr7	143394806	143394807	TRUE	OK	5.2	0.0317	0.8284	0.9558	-0.158	-0.079	9.4	3.0	4.4	4.9	5.2	4.0
E011	chr7	143394807	143395014	TRUE	OK	228.5	0.00283	6.228e-07	0.0002419	-0.602	-0.301	279.8	269.2	300.4	157.1	171.8	192.7
E012	chr7	143395120	143395182	TRUE	OK	161.5	0.00454	0.0001669	0.02265	-0.557	-0.279	204.7	184.1	206.2	110.7	116.3	147.3
E013	chr7	143395318	143395504	TRUE	OK	211.6	0.00589	0.0003847	0.04143	-0.540	-0.270	249.9	246.5	278.2	134.4	170.7	189.6
E014	chr7	143395504	143395601	TRUE	OK	11.0	0.024	0.06997	0.5826	-0.812	-0.406	12.8	11.9	18.8	3.0	8.4	11.1
E015	chr7	143396384	143396510	TRUE	OK	171.7	0.00561	0.00516	0.2059	-0.432	-0.216	194.5	217.8	199.5	117.6	149.8	151.3
E016	chr7	143396510	143396681	TRUE	OK	5.7	0.0685	0.1916	0.7183	-0.924	-0.462	6.8	12.9	3.3	3.0	5.2	3.0
E017	chr7	143397303	143397362	TRUE	OK	115.8	0.00388	0.1297	0.6695	-0.230	-0.115	125.4	139.6	125.3	89.9	107.9	106.9
E018	chr7	143397480	143397560	TRUE	OK	7.2	0.046	0.8686	0.9673	-0.070	-0.035	8.5	6.9	7.8	11.9	3.1	5.0
E019	chr7	143397560	143397657	TRUE	OK	136.4	0.00302	0.0482	0.5272	-0.273	-0.137	150.1	161.3	154.1	120.6	116.3	116.0
E020	chr7	143397919	143398070	TRUE	OK	161.3	0.00678	0.0002884	0.03393	-0.608	-0.304	191.9	200.9	209.5	127.5	103.7	134.2
E021	chr7	143398320	143398448	TRUE	OK	168.0	0.00821	9.33e-07	0.0003379	-0.881	-0.441	232.9	199.9	236.1	112.7	92.2	134.2
E022	chr7	143398448	143398600	TRUE	OK	13.1	0.0295	0.0871	0.6157	-0.760	-0.380	16.2	11.9	23.3	5.9	7.3	14.1
E023	chr7	143398600	143398712	TRUE	OK	136.2	0.00647	7.858e-08	4.003e-05	-0.933	-0.466	210.7	158.4	179.6	89.9	76.5	101.9
E024	chr7	143398712	143398945	TRUE	OK	140.3	0.00919	0.001297	0.09229	-0.622	-0.311	206.4	162.3	156.3	110.7	89.0	117.0
E025	chr7	143399257	143399413	TRUE	OK	154.6	0.00485	0.002042	0.1226	-0.475	-0.238	206.4	162.3	188.5	130.5	107.9	132.1
E026	chr7	143399650	143400053	TRUE	OK	248.0	0.00679	6.221e-05	0.0106	-0.647	-0.324	367.6	274.2	288.2	192.7	169.7	195.7
E027	chr7	143400825	143401323	TRUE	OK	68.1	0.00307	0.8728	0.9684	-0.029	-0.015	74.2	68.3	73.2	56.3	70.2	66.6
E028	chr7	143401323	143401605	TRUE	OK	274.9	0.00463	2.437e-09	1.816e-06	-0.821	-0.411	380.4	309.8	383.6	214.5	187.5	173.5
E029	chr7	143407610	143407650	TRUE	OK	148.8	0.00841	1.34e-05	0.003096	-0.807	-0.403	204.7	162.3	216.2	121.6	90.1	97.8
E030	chr7	143407650	143407678	TRUE	OK	135.3	0.0131	0.0001326	0.01898	-0.831	-0.416	173.2	163.3	197.3	113.7	72.3	91.8
E031	chr7	143408723	143408805	TRUE	OK	117.0	0.011	0.0001093	0.01636	-0.807	-0.404	152.7	140.6	166.3	97.8	62.9	81.7
E032	chr7	143408805	143408856	TRUE	OK	80.4	0.0154	0.001199	0.08785	-0.800	-0.400	99.8	100.0	116.4	66.2	38.8	61.5
J033	chr7	143390645	143391097	FALSE	LOW_COUNTS_INDEP_FILTER	0.3	0.651	0.3284	NA	NA	NA	0.0	0.0	0.0	0.0	0.0	2.0
J034	chr7	143391535	143391619	TRUE	OK	110.6	0.00547	0.007677	0.2528	-0.444	-0.222	125.4	138.6	131.9	83.0	110.0	74.6
J035	chr7	143391775	143393670	TRUE	OK	91.3	0.0022	7.01e-12	8.959e-09	-1.048	-0.524	127.1	123.7	127.5	53.4	52.4	63.5
J036	chr7	143393864	143394193	TRUE	OK	109.2	0.00468	8.936e-07	0.0003255	-0.813	-0.407	143.3	118.8	167.4	63.3	80.7	81.7
J037	chr7	143394343	143394807	TRUE	OK	111.9	0.00663	0.0007813	0.06667	-0.594	-0.297	127.1	144.5	145.2	66.2	94.3	93.8
J038	chr7	143394343	143395120	FALSE	LOW_COUNTS_INDEP_FILTER	0.5	0.162	0.5233	NA	NA	NA	0.0	0.0	1.1	1.0	1.0	0.0
J039	chr7	143395014	143395120	TRUE	OK	107.4	0.00314	7.899e-05	0.01273	-0.599	-0.300	150.1	113.8	136.4	78.1	74.4	91.8
J040	chr7	143395182	143395318	TRUE	OK	125.4	0.00889	0.0003796	0.04104	-0.674	-0.337	157.8	152.4	166.3	73.1	86.9	116.0
J041	chr7	143395504	143396384	TRUE	OK	91.9	0.00455	0.03442	0.4742	-0.354	-0.177	96.4	107.9	117.5	63.3	84.8	81.7
J042	chr7	143396510	143397303	TRUE	OK	97.0	0.00474	0.1292	0.6688	-0.252	-0.126	105.8	117.8	105.3	69.2	91.1	92.8
J043	chr7	143397362	143397560	TRUE	OK	88.7	0.00714	0.153	0.6909	-0.267	-0.134	93.0	112.8	96.4	62.3	88.0	79.7
J044	chr7	143397657	143397919	TRUE	OK	86.0	0.00869	0.0637	0.569	-0.373	-0.186	97.2	100.0	105.3	83.0	56.6	73.6
J045	chr7	143398070	143398320	TRUE	OK	97.6	0.00641	4.247e-05	0.007759	-0.747	-0.374	122.0	125.7	130.8	74.1	55.5	77.7
J046	chr7	143398448	143398600	TRUE	OK	107.1	0.00874	5.976e-07	0.0002338	-0.992	-0.496	163.8	125.7	148.5	64.2	55.5	84.7
J047	chr7	143398945	143399257	TRUE	OK	68.1	0.00664	0.281	0.7631	-0.221	-0.111	89.6	73.2	65.4	55.3	54.5	70.6
J048	chr7	143399413	143399650	TRUE	OK	100.1	0.00524	0.0002103	0.02705	-0.646	-0.323	140.7	101.9	135.2	81.0	64.9	76.7
J049	chr7	143400053	143401323	TRUE	OK	75.6	0.00925	0.0002207	0.02806	-0.812	-0.406	126.2	85.1	85.4	56.3	49.2	51.4
J050	chr7	143401605	143407610	TRUE	OK	133.0	0.00793	4.233e-06	0.001204	-0.856	-0.428	183.4	140.6	204.0	102.8	82.8	84.7
J051	chr7	143407678	143408723	TRUE	OK	112.8	0.0112	0.0001423	0.02004	-0.801	-0.401	148.4	135.6	158.5	95.9	60.8	77.7
N052	chr7	143389977	143390577	TRUE	OK	1458.7	0.00352	5.955e-08	3.169e-05	0.570	0.285	1492.7	1216.5	1331.4	1595.1	1591.2	1525.2

Color Codes
NO TEST	p > 0.05	p < 0.05	p < 0.005	p < 5e-04	p < 5e-05

Gene ENSG00000146904.9
expr	exprTX	normCt	normCtTX	rExpr	rExprTX	rawCt	rawCtTX
PLOT	PLOT	PLOT	PLOT	PLOT	PLOT	PLOT	PLOT
TABLE	TABLE	TABLE	TABLE	TABLE	TABLE	TABLE	TABLE