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Normalized Counts Table (ENSG00000137135.18)

binID	chr	start	end	testable	status	baseMean	dispersion	pvalue	padjust	log2FC (mutant/control)	log2FCvst (mutant/control)	Normalized Coverage Counts
												MCF10A-parental-DMSO-1	MCF10A-parental-DMSO-2	MCF10A-parental-DMSO-3	MCF10A-KI-DMSO-7	MCF10A-KI-DMSO-8	MCF10A-KI-DMSO-9
E001	chr9	35658874	35658876	TRUE	OK	9.8	0.0172	0.7629	0.9368	-0.120	-0.060	9.4	8.9	10.0	8.9	15.7	6.1
E002	chr9	35658876	35659173	TRUE	OK	104.7	0.0025	0.746	0.9315	-0.047	-0.023	104.9	93.0	95.3	104.8	119.4	111.0
E003	chr9	35659342	35660093	TRUE	OK	96.2	0.00542	0.622	0.8911	-0.084	-0.042	77.6	94.0	103.1	109.7	105.8	86.7
E004	chr9	35660093	35660967	TRUE	OK	1102.9	0.00559	0.4584	0.8324	0.107	0.054	981.8	948.2	1042.0	1106.9	1428.8	1109.6
E005	chr9	35660967	35661518	TRUE	OK	484.7	0.00178	0.5696	0.8731	0.055	0.027	437.6	414.7	463.4	498.1	602.3	492.2
E006	chr9	35661518	35661712	TRUE	OK	259.7	0.0026	0.0308	0.4565	-0.247	-0.124	228.6	263.3	287.1	243.1	282.8	253.2
E007	chr9	35661712	35661837	TRUE	OK	283.6	0.00145	0.0005833	0.05508	-0.335	-0.168	281.5	278.1	312.6	268.8	284.9	275.4
E008	chr9	35661837	35662002	TRUE	OK	302.2	0.00617	0.0006748	0.06058	-0.513	-0.256	336.1	288.0	353.6	295.5	256.6	283.4
E009	chr9	35662178	35662227	TRUE	OK	196.4	0.00585	0.0006649	0.06006	-0.529	-0.265	214.9	193.0	235.0	191.7	160.3	183.6
E010	chr9	35662227	35662267	TRUE	OK	191.2	0.00681	0.005149	0.2057	-0.459	-0.230	214.9	187.1	210.6	183.8	156.1	194.7
E011	chr9	35662511	35662644	TRUE	OK	251.2	0.00833	0.006077	0.2243	-0.474	-0.237	302.0	242.5	260.5	227.3	214.7	260.2
E012	chr9	35662644	35662741	TRUE	OK	224.9	0.0123	0.003694	0.1713	-0.584	-0.292	273.0	240.5	231.7	182.8	177.0	244.1
E013	chr9	35662945	35662966	TRUE	OK	174.4	0.0149	0.002411	0.1351	-0.673	-0.336	206.4	207.9	180.7	146.3	121.5	183.6
E014	chr9	35662966	35663074	TRUE	OK	219.0	0.0145	0.002902	0.1494	-0.643	-0.321	261.0	251.4	226.1	199.6	154.0	221.9
E015	chr9	35663074	35663321	TRUE	OK	77.3	0.00968	0.0001026	0.01563	-0.833	-0.416	93.8	101.9	82.0	63.3	51.3	71.6
E016	chr9	35663321	35663392	TRUE	OK	239.9	0.00503	4.966e-05	0.008829	-0.580	-0.290	261.0	258.3	274.9	233.2	193.8	217.9
E017	chr9	35664007	35664126	TRUE	OK	245.2	0.00662	0.004676	0.1955	-0.444	-0.222	265.3	258.3	256.1	253.0	205.3	233.0
E018	chr9	35664371	35664492	TRUE	OK	268.2	0.0152	0.00494	0.2015	-0.607	-0.303	300.2	300.9	291.5	288.6	193.8	234.0
E019	chr9	35664755	35664828	TRUE	OK	193.7	0.0205	0.04178	0.5057	-0.510	-0.255	220.9	223.7	185.1	210.5	135.1	186.6
E020	chr9	35664828	35664850	TRUE	OK	166.5	0.0139	0.01016	0.2904	-0.559	-0.279	184.2	200.9	165.2	172.0	122.6	154.3
E021	chr9	35665031	35665187	TRUE	OK	167.8	0.0174	0.01059	0.2953	-0.606	-0.303	188.5	203.9	169.6	171.0	114.2	159.4
E022	chr9	35665187	35665192	TRUE	OK	26.0	0.00786	0.01178	0.3098	-0.694	-0.347	29.9	30.7	29.9	24.7	15.7	25.2
E023	chr9	35665192	35665195	TRUE	OK	15.5	0.0267	0.1315	0.6713	-0.613	-0.306	17.9	12.9	22.2	16.8	7.3	16.1
E024	chr9	35669583	35669708	FALSE	ALL_ZERO	0.0	NA	NA	NA	NA	NA	0.0	0.0	0.0	0.0	0.0	0.0
E025	chr9	35673810	35675866	TRUE	OK	243.5	0.00347	3.645e-88	1.335e-83	2.888	1.444	58.9	58.4	52.1	391.4	499.7	400.5
J026	chr9	35659173	35660093	TRUE	OK	46.4	0.0035	0.4832	0.8416	-0.140	-0.070	46.9	49.5	37.7	46.4	53.4	44.4
J027	chr9	35660967	35661712	FALSE	LOW_COUNTS_INDEP_FILTER	2.8	0.0319	0.3685	NA	NA	NA	2.6	4.0	3.3	3.0	1.0	3.0
J028	chr9	35662002	35662178	TRUE	OK	158.9	0.00826	0.004789	0.198	-0.508	-0.254	168.0	157.4	192.9	157.1	122.6	155.3
J029	chr9	35662227	35662511	FALSE	LOW_COUNTS_INDEP_FILTER	0.5	0.166	0.5296	NA	NA	NA	0.9	0.0	1.1	0.0	0.0	1.0
J030	chr9	35662267	35662511	TRUE	OK	138.3	0.00365	0.003789	0.1738	-0.419	-0.209	154.4	131.6	153.0	134.4	119.4	137.2
J031	chr9	35662267	35663321	FALSE	LOW_COUNTS_INDEP_FILTER	2.4	0.298	0.2552	NA	NA	NA	0.0	1.0	2.2	6.9	4.2	0.0
J032	chr9	35662741	35662945	TRUE	OK	132.0	0.0275	0.03344	0.4695	-0.613	-0.307	168.9	148.5	126.4	106.7	86.9	154.3
J033	chr9	35662741	35663321	TRUE	OK	17.8	0.00649	0.6406	0.8981	-0.144	-0.072	17.9	14.8	18.8	13.8	19.9	21.2
J034	chr9	35663074	35663321	TRUE	OK	97.5	0.00888	0.005248	0.2079	-0.553	-0.277	110.9	105.9	106.4	101.8	71.2	88.8
J035	chr9	35663392	35664007	TRUE	OK	169.6	0.00229	1.861e-05	0.004042	-0.526	-0.263	180.0	186.1	189.6	167.0	147.7	147.3
J036	chr9	35664126	35664371	TRUE	OK	143.0	0.00694	0.002816	0.147	-0.513	-0.257	152.7	146.5	168.5	150.2	114.2	126.1
J037	chr9	35664492	35664755	TRUE	OK	144.3	0.0245	0.1098	0.6483	-0.442	-0.221	167.2	167.3	126.4	167.0	104.8	133.1
J038	chr9	35664492	35665031	FALSE	LOW_COUNTS_INDEP_FILTER	1.4	0.0769	0.4191	NA	NA	NA	0.9	1.0	3.3	0.0	1.0	2.0
J039	chr9	35664850	35665031	TRUE	OK	142.2	0.0144	0.006715	0.2363	-0.606	-0.303	156.1	176.2	145.2	146.3	101.6	128.1
J040	chr9	35664850	35669583	FALSE	ALL_ZERO	0.0	NA	NA	NA	NA	NA	0.0	0.0	0.0	0.0	0.0	0.0
J041	chr9	35669708	35673810	FALSE	ALL_ZERO	0.0	NA	NA	NA	NA	NA	0.0	0.0	0.0	0.0	0.0	0.0
N042	chr9	35658727	35660400	TRUE	OK	295.5	0.0139	0.8844	0.9719	-0.008	-0.004	290.9	238.5	288.2	297.5	412.7	245.1
N043	chr9	35660461	35660556	TRUE	OK	340.7	0.00109	0.8671	0.9669	-0.014	-0.007	329.2	303.9	310.4	349.9	398.1	353.0
N044	chr9	35660647	35660745	TRUE	OK	258.3	0.00446	0.7536	0.9339	-0.038	-0.019	257.6	229.6	233.9	228.3	310.1	290.5
N045	chr9	35660647	35660770	TRUE	OK	19.4	0.008	0.2865	0.7652	0.331	0.166	11.9	17.8	17.7	26.7	18.9	23.2
N046	chr9	35660858	35660939	TRUE	OK	75.1	0.0109	0.6116	0.8875	-0.104	-0.052	81.9	71.3	61.0	63.3	102.7	70.6
N047	chr9	35674362	35675537	TRUE	OK	61.1	0.00427	4.018e-35	3.681e-31	2.818	1.409	17.9	11.9	10.0	113.7	118.4	94.8
N048	chr9	35675567	35675760	TRUE	OK	64.9	0.0172	8.197e-25	4.68e-21	3.260	1.630	14.5	8.9	8.9	117.6	150.8	88.8

Color Codes
NO TEST	p > 0.05	p < 0.05	p < 0.005	p < 5e-04	p < 5e-05

Gene ENSG00000137135.18
expr	exprTX	normCt	normCtTX	rExpr	rExprTX	rawCt	rawCtTX
PLOT	PLOT	PLOT	PLOT	PLOT	PLOT	PLOT	PLOT
TABLE	TABLE	TABLE	TABLE	TABLE	TABLE	TABLE	TABLE