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binID | chr | start | end | testable | status | baseMean | dispersion | pvalue | padjust | log2FC (mutant/control) | log2FCvst (mutant/control) | Normalized Coverage Counts | |||||
MCF10A-parental-DMSO-1 | MCF10A-parental-DMSO-2 | MCF10A-parental-DMSO-3 | MCF10A-KI-DMSO-7 | MCF10A-KI-DMSO-8 | MCF10A-KI-DMSO-9 | ||||||||||||
E001 | chr3 | 58008399 | 58008856 | TRUE | OK | 3148.5 | 0.0147 | 0.1207 | 0.661 | -0.243 | -0.121 | 3459.7 | 3249.5 | 3417.6 | 3715.9 | 1593.3 | 3454.8 |
E002 | chr3 | 58077045 | 58077294 | TRUE | OK | 3116.6 | 0.0157 | 0.2391 | 0.7447 | -0.173 | -0.086 | 3435.8 | 3074.3 | 3296.8 | 3755.5 | 1595.4 | 3541.6 |
E003 | chr3 | 58078328 | 58078519 | FALSE | LOW_COUNTS_INDEP_FILTER | 0.3 | 0.336 | 0.2525 | NA | NA | NA | 0.0 | 0.0 | 0.0 | 1.0 | 0.0 | 1.0 |
E004 | chr3 | 58078716 | 58078814 | TRUE | OK | 2277.4 | 0.0132 | 0.2333 | 0.7421 | -0.164 | -0.082 | 2499.2 | 2292.4 | 2360.1 | 2730.6 | 1204.7 | 2577.2 |
E005 | chr3 | 58081628 | 58081776 | TRUE | OK | 2794.6 | 0.00894 | 0.1862 | 0.7148 | -0.160 | -0.080 | 2986.3 | 2878.3 | 2897.7 | 3341.4 | 1593.3 | 3070.5 |
E006 | chr3 | 58094835 | 58094954 | TRUE | OK | 2749.8 | 0.013 | 0.2896 | 0.7666 | -0.136 | -0.068 | 2919.7 | 2811.0 | 2823.5 | 3428.4 | 1484.3 | 3032.2 |
E007 | chr3 | 58096140 | 58096218 | TRUE | OK | 2498.0 | 0.0155 | 0.2288 | 0.7399 | -0.175 | -0.087 | 2709.9 | 2547.8 | 2612.8 | 3110.1 | 1278.0 | 2729.5 |
E008 | chr3 | 58097814 | 58097977 | TRUE | OK | 3200.3 | 0.0129 | 0.2606 | 0.7537 | -0.148 | -0.074 | 3467.3 | 3180.2 | 3345.6 | 3965.0 | 1725.3 | 3518.4 |
E009 | chr3 | 58098710 | 58098908 | TRUE | OK | 3856.7 | 0.0128 | 0.2909 | 0.7673 | -0.134 | -0.067 | 4137.8 | 3850.3 | 3996.3 | 4862.4 | 2106.6 | 4187.1 |
E010 | chr3 | 58102202 | 58102340 | TRUE | OK | 3205.9 | 0.0147 | 0.2864 | 0.7652 | -0.146 | -0.073 | 3576.5 | 3208.9 | 3215.9 | 4113.2 | 1706.4 | 3414.5 |
E011 | chr3 | 58103958 | 58104085 | TRUE | OK | 2480.7 | 0.0148 | 0.7963 | 0.9467 | 0.008 | 0.004 | 2754.2 | 2401.3 | 2202.7 | 3264.3 | 1410.0 | 2851.6 |
E012 | chr3 | 58105079 | 58105216 | TRUE | OK | 2634.2 | 0.0101 | 0.783 | 0.9428 | -0.000 | -0.000 | 2901.0 | 2511.1 | 2424.4 | 3382.9 | 1592.2 | 2993.8 |
E013 | chr3 | 58106679 | 58106873 | TRUE | OK | 2985.0 | 0.00879 | 0.4821 | 0.8412 | -0.066 | -0.033 | 3295.0 | 2855.6 | 2925.4 | 3716.9 | 1785.0 | 3331.7 |
E014 | chr3 | 58108457 | 58108571 | TRUE | OK | 2255.8 | 0.0103 | 0.3445 | 0.789 | -0.111 | -0.056 | 2544.4 | 2155.8 | 2263.6 | 2801.8 | 1290.6 | 2478.4 |
E015 | chr3 | 58109178 | 58109322 | TRUE | OK | 2574.6 | 0.00888 | 0.7261 | 0.9255 | -0.007 | -0.004 | 2712.4 | 2441.8 | 2523.0 | 3246.5 | 1550.3 | 2973.7 |
E016 | chr3 | 58109575 | 58109699 | TRUE | OK | 2972.5 | 0.00884 | 0.7518 | 0.9334 | -0.002 | -0.001 | 3141.5 | 2783.3 | 2924.3 | 3758.4 | 1799.6 | 3427.6 |
E017 | chr3 | 58110009 | 58110170 | TRUE | OK | 3652.4 | 0.00955 | 0.5366 | 0.861 | -0.054 | -0.027 | 4029.4 | 3439.6 | 3591.7 | 4522.4 | 2168.4 | 4162.9 |
E018 | chr3 | 58111790 | 58111881 | TRUE | OK | 3449.1 | 0.0101 | 0.3028 | 0.7722 | -0.124 | -0.062 | 3843.5 | 3281.2 | 3559.5 | 4170.6 | 1971.4 | 3868.4 |
E019 | chr3 | 58112148 | 58112318 | TRUE | OK | 3225.5 | 0.00979 | 0.1237 | 0.6641 | -0.206 | -0.103 | 3649.0 | 3155.5 | 3452.0 | 3803.9 | 1796.5 | 3496.2 |
E020 | chr3 | 58118871 | 58118989 | TRUE | OK | 2535.4 | 0.00932 | 0.2537 | 0.7511 | -0.135 | -0.067 | 2763.6 | 2496.3 | 2626.1 | 3125.0 | 1452.9 | 2748.7 |
E021 | chr3 | 58121240 | 58121503 | TRUE | OK | 4055.0 | 0.00592 | 0.4554 | 0.8311 | -0.061 | -0.030 | 4291.3 | 3945.4 | 4069.5 | 4862.4 | 2544.4 | 4616.8 |
E022 | chr3 | 58123092 | 58123690 | TRUE | OK | 6903.4 | 0.00618 | 0.5529 | 0.8668 | -0.044 | -0.022 | 7402.1 | 6742.5 | 6675.6 | 8487.4 | 4417.4 | 7695.4 |
E023 | chr3 | 58124331 | 58124505 | TRUE | OK | 3407.2 | 0.00764 | 0.5887 | 0.8797 | -0.040 | -0.020 | 3732.6 | 3251.5 | 3286.8 | 4288.2 | 2112.9 | 3771.5 |
E024 | chr3 | 58125580 | 58125743 | TRUE | OK | 3088.5 | 0.00569 | 0.3154 | 0.7775 | -0.094 | -0.047 | 3341.1 | 2976.3 | 3160.5 | 3735.7 | 1926.4 | 3391.3 |
E025 | chr3 | 58126601 | 58126762 | TRUE | OK | 3273.8 | 0.00846 | 0.3372 | 0.7861 | -0.117 | -0.058 | 3845.2 | 3192.1 | 3080.6 | 3999.6 | 2009.2 | 3516.3 |
E026 | chr3 | 58130740 | 58130908 | TRUE | OK | 2997.3 | 0.00798 | 0.2157 | 0.733 | -0.155 | -0.077 | 3550.9 | 2906.1 | 2921.0 | 3651.7 | 1825.8 | 3128.0 |
E027 | chr3 | 58131926 | 58132019 | TRUE | OK | 442.8 | 0.00566 | 0.2893 | 0.7665 | -0.122 | -0.061 | 492.2 | 403.8 | 477.8 | 550.5 | 278.6 | 453.9 |
E028 | chr3 | 58132077 | 58132807 | TRUE | OK | 122.9 | 0.0174 | 0.7832 | 0.9429 | 0.091 | 0.045 | 150.1 | 99.0 | 104.2 | 139.3 | 74.4 | 170.5 |
E029 | chr3 | 58132807 | 58132931 | TRUE | OK | 2965.5 | 0.00484 | 0.1258 | 0.666 | -0.154 | -0.077 | 3315.5 | 2854.6 | 3107.2 | 3563.8 | 1875.1 | 3076.5 |
E030 | chr3 | 58134615 | 58134772 | TRUE | OK | 3239.4 | 0.00339 | 0.4586 | 0.8324 | -0.053 | -0.026 | 3503.2 | 3139.7 | 3163.8 | 3917.6 | 2183.0 | 3529.4 |
E031 | chr3 | 58135978 | 58136168 | TRUE | OK | 3827.3 | 0.00144 | 0.8235 | 0.9543 | 0.020 | 0.010 | 4083.2 | 3585.1 | 3639.3 | 4576.7 | 2865.0 | 4214.4 |
E032 | chr3 | 58138281 | 58138529 | TRUE | OK | 4524.4 | 0.00286 | 0.9612 | 0.9915 | 0.008 | 0.004 | 4867.9 | 4214.6 | 4339.9 | 5641.1 | 3276.7 | 4806.5 |
E033 | chr3 | 58141857 | 58141896 | TRUE | OK | 2391.8 | 0.00326 | 0.08554 | 0.613 | -0.153 | -0.077 | 2694.5 | 2342.9 | 2446.6 | 2872.0 | 1614.2 | 2380.5 |
E034 | chr3 | 58141896 | 58141929 | TRUE | OK | 1739.0 | 0.00198 | 0.3347 | 0.7852 | -0.077 | -0.038 | 1946.5 | 1653.0 | 1708.3 | 2044.8 | 1312.5 | 1769.3 |
E035 | chr3 | 58142649 | 58142752 | TRUE | OK | 2937.6 | 0.000685 | 0.8762 | 0.9694 | -0.005 | -0.002 | 3091.2 | 2752.6 | 2909.9 | 3459.0 | 2234.4 | 3178.4 |
E036 | chr3 | 58143472 | 58143613 | TRUE | OK | 3130.6 | 0.000586 | 0.6641 | 0.9057 | -0.023 | -0.011 | 3222.5 | 2977.3 | 3187.1 | 3511.4 | 2492.1 | 3393.3 |
E037 | chr3 | 58145920 | 58146049 | TRUE | OK | 2728.1 | 0.000585 | 0.04729 | 0.5244 | -0.092 | -0.046 | 2907.8 | 2605.2 | 2856.7 | 3059.7 | 2057.3 | 2881.9 |
E038 | chr3 | 58146677 | 58146819 | TRUE | OK | 29.8 | 0.0107 | 3.556e-06 | 0.001038 | 1.326 | 0.663 | 17.1 | 18.8 | 14.4 | 37.6 | 38.8 | 52.5 |
E039 | chr3 | 58146819 | 58146993 | TRUE | OK | 3137.3 | 0.00106 | 0.2564 | 0.7519 | -0.071 | -0.036 | 3381.2 | 2933.8 | 3241.4 | 3439.2 | 2451.2 | 3377.1 |
E040 | chr3 | 58148205 | 58148364 | TRUE | OK | 2957.4 | 0.00135 | 0.1253 | 0.6657 | -0.105 | -0.052 | 3266.0 | 2747.7 | 3093.9 | 3273.2 | 2264.7 | 3098.7 |
E041 | chr3 | 58148648 | 58148852 | TRUE | OK | 3759.1 | 0.00333 | 0.7873 | 0.9441 | 0.010 | 0.005 | 4001.3 | 3348.5 | 3793.4 | 4225.9 | 3251.5 | 3933.9 |
E042 | chr3 | 58149231 | 58149849 | TRUE | OK | 33.8 | 0.0121 | 0.000143 | 0.02012 | 1.072 | 0.536 | 14.5 | 29.7 | 21.1 | 54.4 | 34.6 | 48.4 |
E043 | chr3 | 58149849 | 58149865 | TRUE | OK | 2312.9 | 0.00436 | 0.36 | 0.7952 | 0.085 | 0.042 | 2389.2 | 2006.3 | 2286.9 | 2622.9 | 2117.0 | 2455.2 |
E044 | chr3 | 58149865 | 58149980 | TRUE | OK | 3474.5 | 0.00322 | 0.2252 | 0.7379 | 0.103 | 0.051 | 3539.0 | 3051.6 | 3389.9 | 4084.6 | 3108.0 | 3673.7 |
E045 | chr3 | 58149980 | 58150002 | TRUE | OK | 2283.7 | 0.00276 | 0.1401 | 0.6792 | 0.122 | 0.061 | 2364.4 | 2023.2 | 2124.0 | 2719.8 | 2024.9 | 2446.1 |
E046 | chr3 | 58150104 | 58150227 | TRUE | OK | 3642.4 | 0.00186 | 0.5233 | 0.8563 | 0.038 | 0.019 | 3845.2 | 3348.5 | 3501.9 | 4249.6 | 3059.8 | 3849.2 |
E047 | chr3 | 58150227 | 58151391 | TRUE | OK | 14.8 | 0.0915 | 0.9592 | 0.991 | 0.010 | 0.005 | 12.8 | 17.8 | 13.3 | 6.9 | 24.1 | 14.1 |
E048 | chr3 | 58152707 | 58152854 | TRUE | OK | 4.9 | 0.0298 | 0.383 | 0.8034 | -0.544 | -0.272 | 6.8 | 5.9 | 4.4 | 2.0 | 5.2 | 5.0 |
E049 | chr3 | 58153374 | 58153397 | TRUE | OK | 2616.4 | 0.00235 | 0.7091 | 0.9201 | -0.042 | -0.021 | 2894.1 | 2445.8 | 2550.8 | 2985.6 | 2139.0 | 2683.1 |
E050 | chr3 | 58153397 | 58153641 | TRUE | OK | 4721.4 | 0.00231 | 0.6347 | 0.8959 | 0.027 | 0.013 | 4983.9 | 4319.5 | 4617.1 | 5426.7 | 4021.4 | 4959.8 |
E051 | chr3 | 58154609 | 58154790 | TRUE | OK | 30.6 | 0.0116 | 0.0001151 | 0.01704 | 1.086 | 0.543 | 21.3 | 18.8 | 17.7 | 44.5 | 44.0 | 37.3 |
E052 | chr3 | 58154790 | 58154928 | TRUE | OK | 3133.5 | 0.00465 | 0.194 | 0.7195 | 0.130 | 0.065 | 3230.2 | 2688.3 | 2994.2 | 3583.5 | 2918.4 | 3386.2 |
E053 | chr3 | 58155959 | 58156026 | TRUE | OK | 2523.0 | 0.00434 | 0.3148 | 0.7773 | 0.094 | 0.047 | 2606.7 | 2205.3 | 2454.3 | 2813.6 | 2321.3 | 2736.6 |
E054 | chr3 | 58156026 | 58156075 | TRUE | OK | 2293.1 | 0.00359 | 0.3058 | 0.7735 | 0.089 | 0.045 | 2300.5 | 2047.9 | 2267.0 | 2525.1 | 2084.6 | 2533.9 |
E055 | chr3 | 58159553 | 58159686 | TRUE | OK | 3433.9 | 0.00263 | 0.5413 | 0.8626 | 0.040 | 0.020 | 3489.5 | 3187.2 | 3402.1 | 3862.2 | 3017.9 | 3644.4 |
E056 | chr3 | 58159686 | 58159691 | TRUE | OK | 27.8 | 0.0189 | 0.06341 | 0.5683 | 0.578 | 0.289 | 22.2 | 19.8 | 24.4 | 29.6 | 38.8 | 32.3 |
E057 | chr3 | 58163153 | 58163330 | TRUE | OK | 4536.4 | 0.00423 | 0.3985 | 0.8094 | 0.075 | 0.037 | 4689.6 | 4263.1 | 4208.0 | 5064.0 | 4132.5 | 4860.9 |
E058 | chr3 | 58163330 | 58163512 | TRUE | OK | 77.4 | 0.0275 | 0.374 | 0.8002 | 0.257 | 0.128 | 66.5 | 62.4 | 80.9 | 69.2 | 99.5 | 85.7 |
E059 | chr3 | 58165475 | 58165580 | TRUE | OK | 19.8 | 0.0319 | 0.9601 | 0.9912 | 0.046 | 0.023 | 16.2 | 17.8 | 24.4 | 22.7 | 7.3 | 30.3 |
E060 | chr3 | 58168439 | 58168455 | TRUE | OK | 3075.0 | 0.00497 | 0.4183 | 0.8177 | 0.077 | 0.039 | 3218.3 | 2886.3 | 2803.5 | 3412.5 | 2839.8 | 3289.4 |
E061 | chr3 | 58168455 | 58168658 | TRUE | OK | 5065.5 | 0.00517 | 0.3823 | 0.8032 | 0.087 | 0.043 | 5002.7 | 4796.6 | 4841.0 | 5612.5 | 4750.5 | 5389.5 |
E062 | chr3 | 58168658 | 58169589 | TRUE | OK | 113.2 | 0.00898 | 0.07475 | 0.5933 | 0.329 | 0.165 | 105.8 | 110.9 | 80.9 | 123.5 | 112.1 | 146.3 |
E063 | chr3 | 58169589 | 58169793 | TRUE | OK | 3709.1 | 0.00791 | 0.3149 | 0.7773 | 0.129 | 0.064 | 3670.3 | 3418.8 | 3472.0 | 4073.7 | 3706.1 | 3913.8 |
E064 | chr3 | 58170574 | 58170714 | TRUE | OK | 2061.0 | 0.0123 | 0.1532 | 0.691 | 0.243 | 0.122 | 2051.4 | 1801.4 | 1771.5 | 2282.9 | 2265.8 | 2192.9 |
E065 | chr3 | 58170714 | 58170715 | TRUE | OK | 1131.2 | 0.0103 | 0.1555 | 0.6929 | 0.221 | 0.111 | 1131.9 | 1019.5 | 956.7 | 1257.1 | 1202.6 | 1219.5 |
E066 | chr3 | 58170715 | 58170774 | TRUE | OK | 1795.2 | 0.00832 | 0.2003 | 0.7233 | 0.174 | 0.087 | 1890.2 | 1620.3 | 1512.1 | 2067.5 | 1782.9 | 1898.4 |
E067 | chr3 | 58170774 | 58170777 | TRUE | OK | 1287.9 | 0.00791 | 0.3174 | 0.7782 | 0.130 | 0.065 | 1403.1 | 1204.6 | 1050.9 | 1540.7 | 1197.3 | 1330.5 |
E068 | chr3 | 58170777 | 58170978 | TRUE | OK | 2503.1 | 0.00722 | 0.2422 | 0.7461 | 0.148 | 0.074 | 2511.1 | 2313.2 | 2248.1 | 2887.8 | 2475.3 | 2583.3 |
E069 | chr3 | 58170978 | 58172170 | TRUE | OK | 8497.5 | 0.0314 | 0.2903 | 0.767 | 0.294 | 0.147 | 7776.5 | 7396.8 | 7797.5 | 8562.5 | 10883.8 | 8567.9 |
E070 | chr3 | 58172170 | 58172251 | TRUE | OK | 556.9 | 0.0477 | 0.2684 | 0.7574 | 0.440 | 0.220 | 474.3 | 459.3 | 472.2 | 525.8 | 887.3 | 522.5 |
J071 | chr3 | 58008856 | 58077045 | TRUE | OK | 1302.1 | 0.0147 | 0.1589 | 0.6955 | -0.222 | -0.111 | 1468.8 | 1262.0 | 1437.8 | 1547.7 | 663.1 | 1433.4 |
J072 | chr3 | 58077294 | 58078716 | TRUE | OK | 1545.9 | 0.0134 | 0.1788 | 0.7095 | -0.198 | -0.099 | 1720.4 | 1545.1 | 1645.1 | 1814.5 | 805.5 | 1745.1 |
J073 | chr3 | 58078519 | 58078716 | FALSE | ALL_ZERO | 0.0 | NA | NA | NA | NA | NA | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 |
J074 | chr3 | 58078814 | 58081628 | TRUE | OK | 1458.3 | 0.0101 | 0.1189 | 0.6593 | -0.213 | -0.107 | 1637.7 | 1477.8 | 1539.8 | 1707.8 | 793.0 | 1593.7 |
J075 | chr3 | 58081776 | 58094835 | TRUE | OK | 1702.2 | 0.00908 | 0.2006 | 0.7236 | -0.156 | -0.078 | 1798.9 | 1785.6 | 1750.4 | 2069.5 | 969.0 | 1839.9 |
J076 | chr3 | 58094954 | 58096140 | TRUE | OK | 1821.4 | 0.0165 | 0.2586 | 0.7528 | -0.166 | -0.083 | 1967.0 | 1870.7 | 1886.7 | 2285.9 | 926.0 | 1992.2 |
J077 | chr3 | 58096218 | 58097814 | TRUE | OK | 1741.5 | 0.0169 | 0.1781 | 0.7092 | -0.217 | -0.109 | 1976.3 | 1796.5 | 1791.4 | 2152.5 | 866.3 | 1866.1 |
J078 | chr3 | 58097977 | 58098710 | TRUE | OK | 1749.8 | 0.00937 | 0.3152 | 0.7775 | -0.114 | -0.057 | 1870.6 | 1690.6 | 1847.9 | 2138.6 | 1002.5 | 1948.8 |
J079 | chr3 | 58098908 | 58102202 | TRUE | OK | 2185.3 | 0.0144 | 0.1497 | 0.688 | -0.221 | -0.111 | 2465.9 | 2258.7 | 2263.6 | 2747.4 | 1136.6 | 2239.3 |
J080 | chr3 | 58102340 | 58103958 | TRUE | OK | 1508.3 | 0.0176 | 0.6944 | 0.9155 | -0.014 | -0.007 | 1676.9 | 1426.3 | 1404.5 | 1985.5 | 807.6 | 1749.1 |
J081 | chr3 | 58104085 | 58105079 | TRUE | OK | 1384.7 | 0.013 | 0.9783 | 0.9955 | 0.047 | 0.024 | 1559.2 | 1327.3 | 1165.1 | 1811.5 | 842.2 | 1602.8 |
J082 | chr3 | 58105216 | 58106679 | TRUE | OK | 1656.7 | 0.0071 | 0.6244 | 0.8921 | -0.035 | -0.017 | 1830.5 | 1563.9 | 1591.9 | 2078.4 | 1032.9 | 1842.9 |
J083 | chr3 | 58106873 | 58108457 | TRUE | OK | 1463.8 | 0.00952 | 0.3235 | 0.7809 | -0.118 | -0.059 | 1661.6 | 1409.5 | 1458.8 | 1784.8 | 843.3 | 1625.0 |
J084 | chr3 | 58108571 | 58109178 | TRUE | OK | 1312.5 | 0.0106 | 0.3538 | 0.7928 | -0.113 | -0.056 | 1497.8 | 1255.1 | 1302.5 | 1644.5 | 749.0 | 1426.3 |
J085 | chr3 | 58109322 | 58109575 | TRUE | OK | 1681.2 | 0.00911 | 0.7747 | 0.9403 | 0.004 | 0.002 | 1717.9 | 1590.6 | 1686.1 | 2120.9 | 1004.6 | 1967.0 |
J086 | chr3 | 58109699 | 58110009 | TRUE | OK | 1730.4 | 0.00632 | 0.879 | 0.9702 | 0.011 | 0.006 | 1885.9 | 1607.4 | 1634.0 | 2164.3 | 1111.4 | 1979.1 |
J087 | chr3 | 58110170 | 58111790 | TRUE | OK | 2517.3 | 0.0123 | 0.2668 | 0.7568 | -0.150 | -0.075 | 2875.4 | 2401.3 | 2591.8 | 3074.6 | 1382.7 | 2778.0 |
J088 | chr3 | 58111881 | 58112148 | TRUE | OK | 1961.7 | 0.00889 | 0.1664 | 0.7012 | -0.177 | -0.089 | 2230.5 | 1876.7 | 2080.7 | 2281.9 | 1118.8 | 2181.8 |
J089 | chr3 | 58112318 | 58118871 | TRUE | OK | 1493.6 | 0.0115 | 0.06875 | 0.5802 | -0.273 | -0.136 | 1743.5 | 1539.1 | 1575.2 | 1805.6 | 790.9 | 1507.0 |
J090 | chr3 | 58118989 | 58121240 | TRUE | OK | 1624.8 | 0.00796 | 0.2888 | 0.7662 | -0.115 | -0.058 | 1707.6 | 1608.4 | 1708.3 | 1968.7 | 950.1 | 1805.6 |
J091 | chr3 | 58121503 | 58123092 | TRUE | OK | 1479.3 | 0.00494 | 0.4933 | 0.845 | -0.064 | -0.032 | 1693.1 | 1372.9 | 1430.0 | 1789.8 | 973.2 | 1616.9 |
J092 | chr3 | 58123690 | 58124331 | TRUE | OK | 1759.8 | 0.00897 | 0.8577 | 0.9643 | 0.008 | 0.004 | 1969.5 | 1653.0 | 1597.4 | 2275.0 | 1103.0 | 1960.9 |
J093 | chr3 | 58124505 | 58125580 | TRUE | OK | 2006.4 | 0.00516 | 0.2761 | 0.7611 | -0.101 | -0.050 | 2148.6 | 1948.9 | 2076.3 | 2430.2 | 1250.7 | 2183.8 |
J094 | chr3 | 58125743 | 58126601 | TRUE | OK | 1388.5 | 0.00678 | 0.3106 | 0.7755 | -0.113 | -0.056 | 1600.2 | 1349.1 | 1340.2 | 1687.0 | 855.8 | 1498.9 |
J095 | chr3 | 58126762 | 58130740 | TRUE | OK | 1860.0 | 0.00981 | 0.2694 | 0.7578 | -0.155 | -0.077 | 2262.1 | 1837.1 | 1724.9 | 2259.2 | 1116.7 | 1959.9 |
J096 | chr3 | 58130908 | 58131926 | TRUE | OK | 310.4 | 0.00313 | 0.1617 | 0.6971 | -0.146 | -0.073 | 347.2 | 290.0 | 333.7 | 371.6 | 198.0 | 321.8 |
J097 | chr3 | 58130908 | 58132807 | TRUE | OK | 1392.1 | 0.00865 | 0.1113 | 0.6502 | -0.223 | -0.112 | 1715.3 | 1335.2 | 1406.7 | 1701.8 | 834.9 | 1358.7 |
J098 | chr3 | 58132019 | 58132807 | TRUE | OK | 211.6 | 0.00481 | 0.03462 | 0.4752 | -0.292 | -0.146 | 243.1 | 190.0 | 261.6 | 235.2 | 134.1 | 205.8 |
J099 | chr3 | 58132931 | 58134615 | TRUE | OK | 1734.3 | 0.00464 | 0.1652 | 0.7004 | -0.132 | -0.066 | 1841.6 | 1701.5 | 1850.2 | 2083.3 | 1082.1 | 1846.9 |
J100 | chr3 | 58134772 | 58135978 | TRUE | OK | 1947.0 | 0.00266 | 0.4604 | 0.8331 | -0.057 | -0.029 | 2178.5 | 1886.6 | 1838.0 | 2307.6 | 1370.2 | 2101.1 |
J101 | chr3 | 58136168 | 58138281 | TRUE | OK | 1872.3 | 0.00204 | 0.3059 | 0.7735 | 0.079 | 0.040 | 2019.8 | 1655.0 | 1742.6 | 2289.9 | 1499.0 | 2027.5 |
J102 | chr3 | 58138529 | 58141857 | TRUE | OK | 1800.5 | 0.00631 | 0.05543 | 0.5482 | -0.228 | -0.114 | 2087.2 | 1820.2 | 1864.6 | 2205.8 | 1104.1 | 1720.8 |
J103 | chr3 | 58138529 | 58142649 | TRUE | OK | 167.1 | 0.00336 | 1.539e-25 | 9.023e-22 | 1.453 | 0.727 | 104.1 | 83.1 | 76.5 | 305.4 | 180.2 | 253.2 |
J104 | chr3 | 58141896 | 58142649 | TRUE | OK | 294.7 | 0.00728 | 0.06035 | 0.5607 | -0.260 | -0.130 | 339.5 | 298.9 | 318.2 | 356.8 | 162.4 | 292.5 |
J105 | chr3 | 58141929 | 58142649 | TRUE | OK | 1372.3 | 0.000953 | 0.473 | 0.8378 | -0.047 | -0.024 | 1490.1 | 1317.4 | 1339.1 | 1570.4 | 1089.4 | 1427.3 |
J106 | chr3 | 58142752 | 58143472 | TRUE | OK | 2110.4 | 0.000591 | 0.4277 | 0.8211 | -0.040 | -0.020 | 2213.5 | 1987.5 | 2165.0 | 2316.5 | 1656.1 | 2324.1 |
J107 | chr3 | 58143613 | 58145920 | TRUE | OK | 1631.4 | 0.000341 | 0.02903 | 0.4468 | -0.092 | -0.046 | 1731.5 | 1602.5 | 1673.9 | 1844.1 | 1245.5 | 1690.6 |
J108 | chr3 | 58146049 | 58146819 | TRUE | OK | 1566.5 | 0.00119 | 0.1344 | 0.6744 | -0.102 | -0.051 | 1672.7 | 1459.0 | 1692.7 | 1685.0 | 1214.1 | 1675.5 |
J109 | chr3 | 58146993 | 58148205 | TRUE | OK | 1765.2 | 0.00115 | 0.1126 | 0.6513 | -0.104 | -0.052 | 1962.7 | 1647.0 | 1826.9 | 1913.3 | 1338.7 | 1902.4 |
J110 | chr3 | 58148364 | 58148648 | TRUE | OK | 1608.0 | 0.00208 | 0.03994 | 0.4981 | -0.175 | -0.088 | 1868.9 | 1508.5 | 1691.6 | 1771.0 | 1218.3 | 1589.7 |
J111 | chr3 | 58148852 | 58149849 | TRUE | OK | 2017.6 | 0.00457 | 0.6735 | 0.9089 | 0.030 | 0.015 | 2115.4 | 1787.6 | 2037.5 | 2253.3 | 1833.2 | 2078.9 |
J112 | chr3 | 58150002 | 58150104 | TRUE | OK | 2036.3 | 0.00224 | 0.1746 | 0.7066 | 0.102 | 0.051 | 2102.6 | 1828.2 | 1914.5 | 2437.1 | 1781.8 | 2153.6 |
J113 | chr3 | 58150002 | 58153374 | TRUE | OK | 57.7 | 0.01 | 0.3828 | 0.8033 | 0.177 | 0.089 | 69.9 | 44.5 | 45.5 | 72.1 | 54.5 | 59.5 |
J114 | chr3 | 58150227 | 58152707 | FALSE | LOW_COUNTS_INDEP_FILTER | 0.3 | 0.552 | 0.3397 | NA | NA | NA | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 2.0 |
J115 | chr3 | 58150227 | 58153374 | TRUE | OK | 2294.9 | 0.00168 | 0.5525 | 0.8666 | -0.051 | -0.025 | 2544.4 | 2173.6 | 2223.7 | 2618.0 | 1835.3 | 2374.5 |
J116 | chr3 | 58152854 | 58153374 | FALSE | LOW_COUNTS_INDEP_FILTER | 0.2 | 0.501 | 0.5618 | NA | NA | NA | 0.0 | 0.0 | 1.1 | 0.0 | 0.0 | 0.0 |
J117 | chr3 | 58153641 | 58154790 | TRUE | OK | 1894.0 | 0.00456 | 0.2583 | 0.7526 | 0.112 | 0.056 | 2047.1 | 1610.4 | 1759.3 | 2236.5 | 1707.5 | 2003.3 |
J118 | chr3 | 58154928 | 58155959 | TRUE | OK | 1904.8 | 0.00484 | 0.4936 | 0.8451 | 0.061 | 0.031 | 1995.1 | 1668.8 | 1883.4 | 2082.3 | 1757.7 | 2041.6 |
J119 | chr3 | 58156075 | 58159553 | TRUE | OK | 1783.6 | 0.00368 | 0.3224 | 0.7804 | 0.087 | 0.044 | 1789.5 | 1604.5 | 1753.7 | 1952.8 | 1638.3 | 1962.9 |
J120 | chr3 | 58159686 | 58163153 | TRUE | OK | 2215.7 | 0.00191 | 0.7943 | 0.9461 | -0.031 | -0.016 | 2338.8 | 2123.1 | 2198.2 | 2483.6 | 1875.1 | 2275.6 |
J121 | chr3 | 58163330 | 58168439 | TRUE | OK | 2887.5 | 0.0045 | 0.3893 | 0.8057 | 0.079 | 0.040 | 3022.1 | 2696.2 | 2640.5 | 3202.0 | 2654.4 | 3109.8 |
J122 | chr3 | 58165580 | 58168439 | TRUE | OK | 3.9 | 0.199 | 0.4616 | 0.8337 | 0.808 | 0.404 | 5.1 | 3.0 | 0.0 | 4.0 | 1.0 | 10.1 |
J123 | chr3 | 58168658 | 58169589 | TRUE | OK | 2216.2 | 0.00344 | 0.7165 | 0.9226 | 0.022 | 0.011 | 2239.0 | 2140.0 | 2165.0 | 2455.9 | 1991.3 | 2305.9 |
J124 | chr3 | 58169793 | 58170574 | TRUE | OK | 1417.7 | 0.0145 | 0.1553 | 0.6928 | 0.265 | 0.132 | 1405.7 | 1190.7 | 1238.2 | 1548.6 | 1611.1 | 1512.0 |
J125 | chr3 | 58170714 | 58170715 | FALSE | LOW_COUNTS_INDEP_FILTER | 0.3 | 0.249 | 1 | NA | NA | NA | 0.0 | 0.0 | 1.1 | 1.0 | 0.0 | 0.0 |
N126 | chr3 | 58126762 | 58132807 | TRUE | OK | 17.5 | 0.0235 | 0.5352 | 0.8605 | 0.252 | 0.126 | 13.6 | 22.8 | 11.1 | 21.7 | 10.5 | 25.2 |
N127 | chr3 | 58131989 | 58132807 | TRUE | OK | 41.0 | 0.0118 | 0.2492 | 0.7492 | 0.335 | 0.167 | 35.0 | 36.6 | 36.6 | 68.2 | 27.2 | 42.4 |
Color Codes | |||||
---|---|---|---|---|---|
NO TEST | p > 0.05 | p < 0.05 | p < 0.005 | p < 5e-04 | p < 5e-05 |
Gene ENSG00000136068.14 | |||||||
---|---|---|---|---|---|---|---|
expr | exprTX | normCt | normCtTX | rExpr | rExprTX | rawCt | rawCtTX |
PLOT | PLOT | PLOT | PLOT | PLOT | PLOT | PLOT | PLOT |
TABLE | TABLE | TABLE | TABLE | TABLE | TABLE | TABLE | TABLE |