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binID | chr | start | end | testable | status | baseMean | dispersion | pvalue | padjust | log2FC (yes/no) | log2FCvst (yes/no) | Normalized Coverage Counts | |||||
MCF10A-KI-DMSO-7 | MCF10A-KI-DMSO-8 | MCF10A-KI-DMSO-9 | MCF10A-KI-BYL719-10 | MCF10A-KI-BYL719-11 | MCF10A-KI-BYL719-12 | ||||||||||||
E001 | chr12 | 105235289 | 105235356 | TRUE | OK | 17.4 | 0.0136 | 4.978e-06 | 0.003163 | 1.646 | 0.823 | 12.8 | 6.3 | 8.1 | 23.8 | 24.5 | 29.0 |
E002 | chr12 | 105326969 | 105327063 | FALSE | LOW_COUNTS_INDEP_FILTER | 0.2 | 0.841 | 0.6211 | NA | NA | NA | 0.0 | 0.0 | 1.0 | 0.0 | 0.0 | 0.0 |
E003 | chr12 | 105330635 | 105330673 | TRUE | OK | 19.3 | 0.169 | 0.2269 | 0.7676 | -0.653 | -0.326 | 22.7 | 32.3 | 18.1 | 21.8 | 19.6 | 1.0 |
E004 | chr12 | 105330673 | 105330709 | TRUE | OK | 301.1 | 0.343 | 0.3135 | 0.7954 | -0.532 | -0.266 | 374.7 | 368.1 | 357.6 | 386.2 | 288.9 | 30.9 |
E005 | chr12 | 105330709 | 105330852 | TRUE | OK | 908.5 | 0.0586 | 0.3025 | 0.7921 | -0.290 | -0.145 | 1072.8 | 1025.0 | 983.0 | 1033.5 | 976.3 | 360.6 |
E006 | chr12 | 105330852 | 105330867 | TRUE | OK | 866.8 | 0.0375 | 0.4007 | 0.8243 | -0.189 | -0.095 | 1020.5 | 933.2 | 912.5 | 988.8 | 919.5 | 426.4 |
E007 | chr12 | 105330867 | 105330937 | TRUE | OK | 1057.9 | 0.024 | 0.5583 | 0.8742 | -0.100 | -0.050 | 1196.0 | 1107.4 | 1109.0 | 1186.4 | 1125.2 | 623.6 |
E008 | chr12 | 105348601 | 105348626 | TRUE | OK | 1020.9 | 0.0131 | 0.9888 | 0.9974 | 0.026 | 0.013 | 1110.2 | 1011.4 | 1064.6 | 1141.7 | 1083.1 | 714.5 |
E009 | chr12 | 105353508 | 105353586 | FALSE | LOW_COUNTS_INDEP_FILTER | 0.7 | 0.228 | 0.3486 | NA | NA | NA | 0.0 | 0.0 | 1.0 | 1.0 | 0.0 | 1.9 |
E010 | chr12 | 105365806 | 105365842 | TRUE | OK | 1464.9 | 0.00648 | 0.1889 | 0.7531 | 0.193 | 0.096 | 1503.7 | 1398.3 | 1489.7 | 1584.5 | 1577.6 | 1235.6 |
E011 | chr12 | 105365842 | 105366464 | TRUE | OK | 9.7 | 0.0158 | 0.4799 | 0.8493 | -0.311 | -0.155 | 7.9 | 13.6 | 12.1 | 7.9 | 8.8 | 7.7 |
E012 | chr12 | 105366616 | 105366696 | TRUE | OK | 2018.7 | 0.00308 | 0.03383 | 0.5691 | 0.211 | 0.105 | 2061.7 | 2010.4 | 1998.3 | 2135.5 | 2054.5 | 1851.5 |
E013 | chr12 | 105367471 | 105367476 | TRUE | OK | 1704.0 | 0.00394 | 0.03039 | 0.5532 | 0.237 | 0.118 | 1694.0 | 1688.2 | 1689.1 | 1782.1 | 1704.9 | 1665.9 |
E014 | chr12 | 105367476 | 105367509 | TRUE | OK | 1974.0 | 0.00579 | 0.03694 | 0.5827 | 0.270 | 0.135 | 1988.8 | 1953.0 | 1915.7 | 2041.2 | 1971.3 | 1974.3 |
E015 | chr12 | 105370633 | 105370680 | TRUE | OK | 2180.8 | 0.00545 | 0.07786 | 0.6748 | 0.219 | 0.109 | 2205.7 | 2251.2 | 2106.1 | 2234.8 | 2129.0 | 2158.0 |
E016 | chr12 | 105370680 | 105370940 | TRUE | OK | 3356.2 | 0.0126 | 0.5773 | 0.8805 | 0.084 | 0.042 | 3485.5 | 3696.4 | 3259.4 | 3323.9 | 3146.4 | 3225.4 |
E017 | chr12 | 105370940 | 105371180 | TRUE | OK | 1531.5 | 0.00765 | 0.8762 | 0.97 | -0.032 | -0.016 | 1575.6 | 1806.0 | 1468.5 | 1521.9 | 1324.0 | 1492.8 |
E018 | chr12 | 105371180 | 105371203 | TRUE | OK | 358.1 | 0.00768 | 0.5096 | 0.8591 | 0.103 | 0.051 | 337.2 | 425.4 | 327.3 | 404.1 | 298.7 | 355.8 |
E019 | chr12 | 105371203 | 105371517 | TRUE | OK | 430.0 | 0.00886 | 0.3938 | 0.8219 | -0.157 | -0.078 | 426.9 | 579.8 | 408.9 | 425.9 | 342.7 | 395.4 |
E020 | chr12 | 105371517 | 105371518 | FALSE | LOW_COUNTS_INDEP_FILTER | 2.1 | 0.0591 | 0.3956 | NA | NA | NA | 2.0 | 1.0 | 2.0 | 2.0 | 2.9 | 2.9 |
E021 | chr12 | 105395631 | 105396097 | FALSE | LOW_COUNTS_INDEP_FILTER | 3.9 | 0.127 | 0.02481 | NA | NA | NA | 3.9 | 1.0 | 0.0 | 4.0 | 4.9 | 9.7 |
J022 | chr12 | 105235356 | 105326969 | FALSE | ALL_ZERO | 0.0 | NA | NA | NA | NA | NA | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 |
J023 | chr12 | 105327063 | 105348601 | FALSE | LOW_COUNTS_INDEP_FILTER | 0.2 | 0.551 | 0.5853 | NA | NA | NA | 0.0 | 0.0 | 1.0 | 0.0 | 0.0 | 0.0 |
J024 | chr12 | 105330937 | 105348601 | TRUE | OK | 901.1 | 0.0196 | 0.8114 | 0.953 | -0.015 | -0.007 | 1006.7 | 899.9 | 936.7 | 1016.6 | 972.4 | 574.3 |
J025 | chr12 | 105330937 | 105366616 | FALSE | LOW_COUNTS_INDEP_FILTER | 1.3 | 0.0646 | 0.04345 | NA | NA | NA | 2.0 | 3.1 | 2.0 | 0.0 | 1.0 | 0.0 |
J026 | chr12 | 105348626 | 105365806 | TRUE | OK | 900.9 | 0.0098 | 0.8695 | 0.9684 | 0.047 | 0.023 | 975.2 | 874.8 | 944.8 | 971.9 | 967.5 | 671.0 |
J027 | chr12 | 105348626 | 105366616 | TRUE | OK | 20.5 | 0.0079 | 0.2261 | 0.7675 | -0.359 | -0.180 | 20.7 | 28.2 | 23.2 | 24.8 | 14.7 | 11.6 |
J028 | chr12 | 105348626 | 105395631 | FALSE | LOW_COUNTS_INDEP_FILTER | 0.7 | 0.128 | 0.9488 | NA | NA | NA | 1.0 | 1.0 | 0.0 | 0.0 | 1.0 | 1.0 |
J029 | chr12 | 105353586 | 105365806 | FALSE | ALL_ZERO | 0.0 | NA | NA | NA | NA | NA | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 |
J030 | chr12 | 105365842 | 105366616 | TRUE | OK | 1160.0 | 0.00306 | 0.00451 | 0.2822 | 0.287 | 0.143 | 1151.7 | 1089.6 | 1134.1 | 1256.9 | 1241.7 | 1085.8 |
J031 | chr12 | 105366696 | 105367471 | TRUE | OK | 1647.9 | 0.00361 | 0.02474 | 0.5238 | 0.237 | 0.118 | 1641.7 | 1622.5 | 1635.7 | 1725.5 | 1656.0 | 1605.9 |
J032 | chr12 | 105366696 | 105367476 | TRUE | OK | 19.8 | 0.00572 | 0.7874 | 0.9463 | -0.079 | -0.039 | 22.7 | 20.9 | 20.1 | 17.9 | 20.6 | 16.4 |
J033 | chr12 | 105367509 | 105370633 | TRUE | OK | 1749.6 | 0.00558 | 0.04213 | 0.6011 | 0.258 | 0.129 | 1779.7 | 1745.5 | 1659.9 | 1804.9 | 1734.3 | 1773.2 |
N034 | chr12 | 105229223 | 105235958 | TRUE | OK | 62.6 | 0.024 | 0.00545 | 0.3066 | 0.828 | 0.414 | 48.3 | 32.3 | 63.5 | 85.4 | 85.2 | 60.9 |
N035 | chr12 | 105330937 | 105365806 | TRUE | OK | 12.8 | 0.0112 | 0.0574 | 0.6424 | -0.717 | -0.359 | 15.8 | 15.6 | 18.1 | 13.9 | 4.9 | 8.7 |
Color Codes | |||||
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NO TEST | p > 0.05 | p < 0.05 | p < 0.005 | p < 5e-04 | p < 5e-05 |
Gene ENSG00000235162.8 | |||||||
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expr | exprTX | normCt | normCtTX | rExpr | rExprTX | rawCt | rawCtTX |
PLOT | PLOT | PLOT | PLOT | PLOT | PLOT | PLOT | PLOT |
TABLE | TABLE | TABLE | TABLE | TABLE | TABLE | TABLE | TABLE |