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binID | chr | start | end | testable | status | baseMean | dispersion | pvalue | padjust | log2FC (yes/no) | log2FCvst (yes/no) | Normalized Coverage Counts | |||||
MCF10A-KI-DMSO-7 | MCF10A-KI-DMSO-8 | MCF10A-KI-DMSO-9 | MCF10A-KI-BYL719-10 | MCF10A-KI-BYL719-11 | MCF10A-KI-BYL719-12 | ||||||||||||
E001 | chr8 | 98024850 | 98025738 | FALSE | LOW_COUNTS_INDEP_FILTER | 3.8 | 0.123 | 0.7576 | NA | NA | NA | 3.9 | 4.2 | 2.0 | 8.9 | 1.0 | 2.9 |
E002 | chr8 | 98041718 | 98041720 | TRUE | OK | 79.0 | 0.0139 | 0.04533 | 0.6117 | 0.494 | 0.247 | 57.2 | 84.5 | 59.4 | 70.5 | 119.5 | 83.1 |
E003 | chr8 | 98041720 | 98041799 | TRUE | OK | 5504.0 | 0.00284 | 0.408 | 0.8264 | 0.067 | 0.034 | 5107.5 | 6868.4 | 4486.2 | 5534.8 | 5418.4 | 5608.6 |
E004 | chr8 | 98041799 | 98041806 | TRUE | OK | 5539.7 | 0.00286 | 0.4096 | 0.827 | 0.067 | 0.033 | 5142.0 | 6912.2 | 4515.4 | 5565.6 | 5454.6 | 5648.3 |
E005 | chr8 | 98041806 | 98041850 | TRUE | OK | 8078.4 | 0.00359 | 0.3517 | 0.8079 | -0.105 | -0.052 | 7632.7 | 10734.8 | 6962.9 | 8047.6 | 7310.3 | 7782.1 |
E006 | chr8 | 98042644 | 98042718 | TRUE | OK | 19191.9 | 0.00203 | 0.2794 | 0.7848 | -0.091 | -0.045 | 17557.9 | 24643.6 | 17215.5 | 18842.2 | 18187.2 | 18705.4 |
E007 | chr8 | 98042718 | 98042775 | TRUE | OK | 24497.2 | 0.00245 | 0.3214 | 0.7984 | -0.088 | -0.044 | 22463.2 | 30810.3 | 22208.3 | 24089.0 | 23268.7 | 24143.8 |
E008 | chr8 | 98042775 | 98042830 | TRUE | OK | 514.1 | 0.0606 | 0.2979 | 0.7911 | -0.306 | -0.153 | 575.8 | 690.3 | 462.3 | 528.2 | 621.8 | 205.9 |
E009 | chr8 | 98042830 | 98043085 | TRUE | OK | 189.0 | 0.00839 | 0.004359 | 0.2776 | -0.504 | -0.252 | 207.1 | 289.9 | 177.3 | 124.1 | 159.6 | 176.0 |
E010 | chr8 | 98043085 | 98043207 | TRUE | OK | 132.0 | 0.00627 | 8.198e-05 | 0.02711 | -0.668 | -0.334 | 153.8 | 210.6 | 127.9 | 85.4 | 98.9 | 115.1 |
E011 | chr8 | 98043446 | 98043674 | TRUE | OK | 101.2 | 0.00476 | 0.001607 | 0.1707 | -0.509 | -0.254 | 110.4 | 127.2 | 123.9 | 75.5 | 84.2 | 86.0 |
E012 | chr8 | 98043938 | 98044076 | TRUE | OK | 82.9 | 0.00324 | 0.001213 | 0.147 | -0.515 | -0.258 | 91.7 | 112.6 | 92.7 | 64.5 | 63.7 | 72.5 |
E013 | chr8 | 98044076 | 98044132 | TRUE | OK | 101.1 | 0.00266 | 0.002556 | 0.2168 | -0.436 | -0.218 | 109.4 | 140.8 | 103.7 | 79.4 | 84.2 | 88.9 |
E014 | chr8 | 98044132 | 98044241 | TRUE | OK | 131.4 | 0.00255 | 0.01864 | 0.4807 | -0.308 | -0.154 | 142.0 | 174.1 | 126.9 | 108.2 | 118.5 | 118.9 |
E015 | chr8 | 98044432 | 98044826 | TRUE | OK | 239.1 | 0.00248 | 4.553e-06 | 0.002938 | -0.510 | -0.255 | 271.2 | 314.9 | 267.9 | 197.6 | 189.0 | 194.3 |
E016 | chr8 | 98044826 | 98044867 | TRUE | OK | 133.7 | 0.00381 | 0.03587 | 0.5781 | -0.296 | -0.148 | 145.9 | 171.0 | 131.9 | 104.2 | 133.2 | 116.0 |
E017 | chr8 | 98044867 | 98044942 | TRUE | OK | 762.7 | 0.00792 | 0.4012 | 0.8244 | -0.121 | -0.061 | 676.4 | 1004.1 | 740.3 | 759.5 | 818.7 | 577.2 |
E018 | chr8 | 98044942 | 98045088 | TRUE | OK | 33294.0 | 0.00328 | 0.09933 | 0.6973 | 0.177 | 0.087 | 30123.6 | 40431.5 | 30357.7 | 33122.4 | 32914.6 | 32814.4 |
E019 | chr8 | 98045088 | 98045346 | TRUE | OK | 766.6 | 0.00918 | 0.3572 | 0.8098 | -0.127 | -0.064 | 765.1 | 891.5 | 780.6 | 767.4 | 814.8 | 580.1 |
E020 | chr8 | 98045346 | 98045399 | TRUE | OK | 21450.6 | 0.00602 | 0.07891 | 0.6755 | 0.251 | 0.125 | 19797.1 | 24078.5 | 19190.6 | 21917.8 | 21412.0 | 22307.8 |
E021 | chr8 | 98045399 | 98045507 | TRUE | OK | 860.9 | 0.000958 | 0.8112 | 0.9529 | -0.012 | -0.006 | 768.1 | 1057.3 | 812.8 | 857.8 | 863.7 | 805.4 |
E022 | chr8 | 98045507 | 98045514 | TRUE | OK | 9277.5 | 0.00511 | 0.4135 | 0.8283 | 0.114 | 0.057 | 8655.2 | 10322.9 | 8495.9 | 9619.1 | 8687.2 | 9884.9 |
E023 | chr8 | 98045514 | 98045544 | TRUE | OK | 8931.7 | 0.00513 | 0.4193 | 0.8299 | 0.113 | 0.056 | 8327.8 | 9946.5 | 8173.6 | 9237.9 | 8344.4 | 9560.1 |
E024 | chr8 | 98045544 | 98045545 | TRUE | OK | 584.4 | 0.00359 | 0.4506 | 0.8396 | -0.072 | -0.036 | 575.8 | 686.1 | 564.0 | 557.0 | 515.1 | 608.1 |
E025 | chr8 | 98045545 | 98045546 | TRUE | OK | 576.3 | 0.00391 | 0.3947 | 0.8222 | -0.086 | -0.043 | 567.9 | 680.9 | 560.0 | 550.0 | 498.5 | 600.4 |
E026 | chr8 | 98045546 | 98045548 | TRUE | OK | 574.3 | 0.00403 | 0.3897 | 0.8202 | -0.088 | -0.044 | 567.9 | 676.7 | 559.0 | 547.0 | 496.5 | 598.5 |
E027 | chr8 | 98045548 | 98045550 | TRUE | OK | 499.8 | 0.006 | 0.5186 | 0.8619 | -0.074 | -0.037 | 486.1 | 586.0 | 490.5 | 472.6 | 418.2 | 545.3 |
E028 | chr8 | 98045714 | 98046469 | TRUE | OK | 90.0 | 0.00317 | 0.7738 | 0.9424 | -0.048 | -0.024 | 76.9 | 124.1 | 78.6 | 84.4 | 90.1 | 86.0 |
J029 | chr8 | 98025738 | 98044942 | FALSE | LOW_COUNTS_INDEP_FILTER | 1.2 | 0.109 | 0.7607 | NA | NA | NA | 1.0 | 3.1 | 0.0 | 2.0 | 0.0 | 1.0 |
J030 | chr8 | 98041850 | 98042644 | TRUE | OK | 7942.2 | 0.00358 | 0.3774 | 0.8159 | -0.101 | -0.050 | 7447.3 | 10594.0 | 6839.0 | 7870.8 | 7138.9 | 7762.7 |
J031 | chr8 | 98042718 | 98044942 | TRUE | OK | 588.0 | 0.00541 | 0.4185 | 0.8297 | 0.120 | 0.060 | 575.8 | 642.3 | 503.6 | 633.4 | 531.7 | 641.0 |
J032 | chr8 | 98042775 | 98044826 | TRUE | OK | 17.0 | 0.0394 | 0.8897 | 0.9736 | 0.114 | 0.057 | 13.8 | 19.8 | 16.1 | 15.9 | 27.4 | 8.7 |
J033 | chr8 | 98042775 | 98044942 | TRUE | OK | 22030.5 | 0.00216 | 0.412 | 0.8277 | -0.070 | -0.035 | 20062.3 | 27725.9 | 20054.8 | 21557.4 | 20833.2 | 21949.1 |
J034 | chr8 | 98042775 | 98045346 | TRUE | OK | 57.5 | 0.0222 | 0.3203 | 0.798 | -0.278 | -0.139 | 45.4 | 79.2 | 67.5 | 68.5 | 35.3 | 49.3 |
J035 | chr8 | 98043207 | 98044076 | FALSE | LOW_COUNTS_INDEP_FILTER | 1.0 | 0.177 | 0.4881 | NA | NA | NA | 3.0 | 0.0 | 1.0 | 0.0 | 1.0 | 1.0 |
J036 | chr8 | 98043674 | 98043938 | FALSE | LOW_COUNTS_INDEP_FILTER | 0.3 | 0.263 | 1 | NA | NA | NA | 0.0 | 1.0 | 0.0 | 0.0 | 0.0 | 1.0 |
J037 | chr8 | 98045088 | 98045346 | TRUE | OK | 21164.0 | 0.00563 | 0.06332 | 0.6527 | 0.255 | 0.127 | 19518.0 | 23724.0 | 18896.5 | 21604.1 | 21200.4 | 22041.0 |
J038 | chr8 | 98045399 | 98045507 | TRUE | OK | 9270.9 | 0.00492 | 0.4055 | 0.8255 | 0.114 | 0.057 | 8652.2 | 10314.6 | 8487.9 | 9615.2 | 8674.5 | 9881.1 |
J039 | chr8 | 98045399 | 98045714 | TRUE | OK | 20.6 | 0.018 | 0.5604 | 0.8749 | 0.186 | 0.093 | 9.9 | 28.2 | 21.2 | 22.8 | 25.5 | 16.4 |
N040 | chr8 | 98030614 | 98032245 | TRUE | OK | 11.9 | 0.0107 | 0.5443 | 0.8701 | 0.244 | 0.122 | 13.8 | 9.4 | 10.1 | 13.9 | 10.8 | 13.5 |
N041 | chr8 | 98033176 | 98033560 | TRUE | OK | 15.8 | 0.0106 | 0.9249 | 0.9823 | -0.029 | -0.014 | 16.8 | 20.9 | 11.1 | 17.9 | 18.6 | 9.7 |
N042 | chr8 | 98033659 | 98035656 | TRUE | OK | 10.3 | 0.0334 | 0.4028 | 0.8249 | -0.374 | -0.187 | 13.8 | 12.5 | 9.1 | 4.0 | 8.8 | 13.5 |
N043 | chr8 | 98042775 | 98045114 | TRUE | OK | 13.8 | 0.0316 | 0.5253 | 0.864 | -0.246 | -0.123 | 12.8 | 18.8 | 14.1 | 8.9 | 7.8 | 20.3 |
Color Codes | |||||
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NO TEST | p > 0.05 | p < 0.05 | p < 0.005 | p < 5e-04 | p < 5e-05 |
Gene ENSG00000156482.11 | |||||||
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expr | exprTX | normCt | normCtTX | rExpr | rExprTX | rawCt | rawCtTX |
PLOT | PLOT | PLOT | PLOT | PLOT | PLOT | PLOT | PLOT |
TABLE | TABLE | TABLE | TABLE | TABLE | TABLE | TABLE | TABLE |