<<

< Prev Gene

TOP

Next Gene >

>>

Normalized Counts Table (ENSG00000111906.17)

binID	chr	start	end	testable	status	baseMean	dispersion	pvalue	padjust	log2FC (yes/no)	log2FCvst (yes/no)	Normalized Coverage Counts
												MCF10A-KI-DMSO-7	MCF10A-KI-DMSO-8	MCF10A-KI-DMSO-9	MCF10A-KI-BYL719-10	MCF10A-KI-BYL719-11	MCF10A-KI-BYL719-12
E001	chr6	125219961	125220152	TRUE	OK	764.4	0.00516	0.0862	0.6847	0.229	0.115	799.7	768.5	722.2	824.0	731.5	740.6
E002	chr6	125221844	125221927	FALSE	ALL_ZERO	0.0	NA	NA	NA	NA	NA	0.0	0.0	0.0	0.0	0.0	0.0
E003	chr6	125221927	125221983	FALSE	ALL_ZERO	0.0	NA	NA	NA	NA	NA	0.0	0.0	0.0	0.0	0.0	0.0
E004	chr6	125234345	125234413	FALSE	ALL_ZERO	0.0	NA	NA	NA	NA	NA	0.0	0.0	0.0	0.0	0.0	0.0
E005	chr6	125265181	125265352	TRUE	OK	12.3	0.0533	0.4213	0.8303	0.460	0.230	13.8	8.3	11.1	18.9	15.7	5.8
E006	chr6	125275349	125275881	TRUE	OK	59.3	0.00532	0.1254	0.7205	0.306	0.153	62.1	53.2	55.4	57.6	60.7	66.7
E007	chr6	125275881	125275885	TRUE	OK	34.8	0.007	0.9066	0.9778	-0.025	-0.012	41.4	39.6	31.2	27.8	30.4	38.7
E008	chr6	125275885	125276162	TRUE	OK	1363.6	0.00508	0.1436	0.7319	-0.199	-0.100	1378.4	1886.3	1288.2	1203.3	1205.5	1220.1
E009	chr6	125276162	125276217	TRUE	OK	1068.3	0.00113	0.416	0.829	-0.058	-0.029	1113.2	1327.4	1021.3	1017.6	961.7	968.8
E010	chr6	125276217	125276243	TRUE	OK	1072.5	0.00104	0.3874	0.8194	-0.058	-0.029	1116.2	1322.2	1037.4	1034.5	953.8	970.7
E011	chr6	125276243	125276954	TRUE	OK	93.7	0.0145	0.6136	0.8924	-0.135	-0.067	75.9	137.6	98.7	73.5	99.9	76.4
E012	chr6	125276954	125277078	TRUE	OK	20.6	0.012	0.884	0.9721	0.047	0.023	20.7	27.1	17.1	13.9	25.5	19.3
E013	chr6	125277078	125277101	TRUE	OK	31.2	0.00568	0.6606	0.9077	0.111	0.055	29.6	35.5	31.2	30.8	32.3	28.0
E014	chr6	125277101	125277240	TRUE	OK	1803.9	0.00119	0.3163	0.7963	-0.068	-0.034	1865.5	2209.5	1763.6	1710.6	1568.8	1705.5
E015	chr6	125277240	125279414	TRUE	OK	13.0	0.0122	0.04135	0.5987	0.774	0.387	11.8	10.4	9.1	13.9	14.7	18.4
E016	chr6	125292840	125292909	TRUE	OK	1596.3	0.00254	0.9959	0.999	0.005	0.002	1648.6	1882.1	1563.2	1543.8	1370.0	1570.1
E017	chr6	125292909	125293231	TRUE	OK	30.5	0.0195	0.2013	0.7585	-0.386	-0.193	36.5	34.4	38.3	30.8	28.4	14.5
E018	chr6	125297486	125297569	TRUE	OK	15.2	0.0466	0.1622	0.7401	0.652	0.326	12.8	6.3	19.1	16.9	14.7	21.3
E019	chr6	125298649	125298713	TRUE	OK	19.9	0.00839	0.8542	0.9642	-0.052	-0.026	22.7	22.9	19.1	16.9	16.6	21.3
E020	chr6	125298713	125298816	TRUE	OK	1150.8	0.00241	0.3123	0.795	0.099	0.049	1176.3	1283.6	1128.1	1145.7	1023.3	1147.6
E021	chr6	125300276	125300537	TRUE	OK	20.2	0.0392	0.9816	0.9956	0.022	0.011	14.8	24.0	25.2	28.8	17.6	10.6
E022	chr6	125300537	125300659	TRUE	OK	1679.1	0.00243	0.4031	0.825	0.083	0.041	1714.7	1876.9	1681.1	1659.9	1528.7	1613.7
E023	chr6	125301848	125301937	TRUE	OK	668.0	0.00456	0.3554	0.8092	0.121	0.061	697.1	685.1	679.9	648.3	641.4	656.5
E024	chr6	125301937	125301958	TRUE	OK	281.3	0.00422	0.2555	0.7776	0.154	0.077	298.8	285.7	272.0	273.0	288.9	269.7
E025	chr6	125301958	125301974	TRUE	OK	160.1	0.00285	0.3337	0.802	0.130	0.065	170.6	171.0	149.1	156.9	145.9	167.3
E026	chr6	125301974	125301975	TRUE	OK	67.1	0.0126	0.5054	0.8575	-0.163	-0.082	88.7	82.4	54.4	53.6	53.9	69.6
E027	chr6	125301975	125302072	TRUE	OK	106.4	0.0211	0.6262	0.8965	0.133	0.067	127.2	122.0	76.5	94.3	84.2	134.4
E028	chr6	125302072	125302078	TRUE	OK	15.3	0.0405	0.07824	0.6751	0.806	0.403	16.8	13.6	6.0	16.9	12.7	26.1
J029	chr6	125220152	125221844	FALSE	ALL_ZERO	0.0	NA	NA	NA	NA	NA	0.0	0.0	0.0	0.0	0.0	0.0
J030	chr6	125221983	125234345	FALSE	ALL_ZERO	0.0	NA	NA	NA	NA	NA	0.0	0.0	0.0	0.0	0.0	0.0
J031	chr6	125234413	125265181	FALSE	ALL_ZERO	0.0	NA	NA	NA	NA	NA	0.0	0.0	0.0	0.0	0.0	0.0
J032	chr6	125234413	125277101	FALSE	ALL_ZERO	0.0	NA	NA	NA	NA	NA	0.0	0.0	0.0	0.0	0.0	0.0
J033	chr6	125265352	125276162	TRUE	OK	11.9	0.0569	0.3418	0.8046	0.551	0.276	12.8	7.3	11.1	18.9	15.7	5.8
J034	chr6	125276243	125277101	TRUE	OK	964.2	0.000554	0.4158	0.829	-0.047	-0.023	992.9	1184.5	939.7	928.3	858.8	880.8
J035	chr6	125277240	125292840	TRUE	OK	1046.9	0.00272	0.4847	0.851	-0.063	-0.032	1110.2	1265.9	1021.3	985.8	864.7	1033.5
J036	chr6	125277240	125298649	FALSE	ALL_ZERO	0.0	NA	NA	NA	NA	NA	0.0	0.0	0.0	0.0	0.0	0.0
J037	chr6	125292909	125298713	TRUE	OK	719.9	0.0019	0.4601	0.8429	0.068	0.034	739.5	831.0	686.9	688.0	633.6	740.6
J038	chr6	125292909	125300537	TRUE	OK	531.8	0.00164	0.4569	0.8418	-0.060	-0.030	549.2	637.1	541.9	508.3	435.8	518.2
J039	chr6	125297569	125298713	FALSE	LOW_COUNTS_INDEP_FILTER	2.6	0.157	0.07877	NA	NA	NA	3.9	0.0	0.0	3.0	3.9	4.8
J040	chr6	125298816	125300537	TRUE	OK	804.5	0.00194	0.2258	0.7673	0.111	0.056	808.5	882.1	802.8	815.1	720.7	797.6
J041	chr6	125300659	125301848	TRUE	OK	655.2	0.00451	0.2696	0.7822	0.143	0.072	676.4	665.3	667.8	634.4	634.6	652.6
N042	chr6	125153970	125220077	TRUE	OK	452.3	0.0106	0.2521	0.776	0.218	0.109	481.2	410.8	460.3	501.4	415.2	444.7
N043	chr6	125154532	125220077	TRUE	OK	19.5	0.00658	0.4291	0.8327	0.240	0.120	22.7	18.8	16.1	17.9	19.6	22.2
N044	chr6	125220193	125229117	TRUE	OK	795.2	0.00183	0.06142	0.65	0.164	0.082	812.5	862.3	753.4	831.0	737.4	774.4
N045	chr6	125229266	125248281	TRUE	OK	764.7	0.00542	0.01042	0.3975	0.343	0.172	786.8	732.0	697.0	790.3	772.7	809.2
N046	chr6	125248383	125253716	TRUE	OK	277.6	0.00146	4.984e-06	0.003163	0.442	0.221	239.6	306.6	221.6	322.7	289.9	285.2
N047	chr6	125248383	125257097	TRUE	OK	43.8	0.00553	0.1665	0.7426	0.296	0.148	43.4	55.3	28.2	45.7	41.1	49.3
N048	chr6	125248383	125262833	TRUE	OK	410.1	0.00155	0.01781	0.4744	0.215	0.108	413.1	439.0	374.7	398.1	413.3	422.5
N049	chr6	125253755	125257097	TRUE	OK	170.7	0.00155	0.0002693	0.06062	0.411	0.206	150.9	190.8	134.0	194.6	175.3	178.9
N050	chr6	125253755	125262833	TRUE	OK	70.1	0.00267	0.06218	0.6507	0.309	0.154	58.2	82.4	61.4	71.5	78.3	68.6
N051	chr6	125257158	125262833	TRUE	OK	235.4	0.00587	0.01658	0.4642	0.357	0.178	242.6	252.3	174.2	275.0	229.2	238.8
N052	chr6	125257180	125262833	TRUE	OK	11.7	0.00915	0.02752	0.5401	0.847	0.424	9.9	9.4	8.1	11.9	14.7	16.4
N053	chr6	125277240	125292827	TRUE	OK	31.7	0.00799	0.9072	0.9779	-0.026	-0.013	38.5	35.5	28.2	21.8	33.3	32.9
N054	chr6	125300659	125301243	TRUE	OK	10.3	0.05	0.596	0.8866	0.330	0.165	10.8	9.4	9.1	9.9	17.6	4.8
N055	chr6	125300659	125301597	TRUE	OK	19.8	0.00873	0.7117	0.9235	0.117	0.058	14.8	25.0	21.2	25.8	15.7	16.4
N056	chr6	125300659	125302032	TRUE	OK	40.0	0.0292	0.1119	0.7093	0.576	0.288	38.5	40.7	25.2	40.7	30.4	64.8

Color Codes
NO TEST	p > 0.05	p < 0.05	p < 0.005	p < 5e-04	p < 5e-05

Gene ENSG00000111906.17
expr	exprTX	normCt	normCtTX	rExpr	rExprTX	rawCt	rawCtTX
PLOT	PLOT	PLOT	PLOT	PLOT	PLOT	PLOT	PLOT
TABLE	TABLE	TABLE	TABLE	TABLE	TABLE	TABLE	TABLE