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| binID | chr | start | end | testable | status | baseMean | dispersion | pvalue | padjust | log2FC (yes/no) | log2FCvst (yes/no) | Normalized Coverage Counts | |||||
| MCF10A-KI-DMSO-7 | MCF10A-KI-DMSO-8 | MCF10A-KI-DMSO-9 | MCF10A-KI-BYL719-10 | MCF10A-KI-BYL719-11 | MCF10A-KI-BYL719-12 | ||||||||||||
| E001 | chr1 | 67832302 | 67832308 | FALSE | LOW_COUNTS_INDEP_FILTER | 4.0 | 0.0524 | 0.9819 | NA | NA | NA | 5.9 | 4.2 | 1.0 | 4.0 | 2.9 | 5.8 |
| E002 | chr1 | 67832308 | 67832436 | FALSE | LOW_COUNTS_INDEP_FILTER | 6.9 | 0.0664 | 0.502 | NA | NA | NA | 6.9 | 5.2 | 4.0 | 7.9 | 3.9 | 13.5 |
| E003 | chr1 | 67955404 | 67955784 | FALSE | ALL_ZERO | 0.0 | NA | NA | NA | NA | NA | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 |
| E004 | chr1 | 67956155 | 67956262 | FALSE | ALL_ZERO | 0.0 | NA | NA | NA | NA | NA | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 |
| E005 | chr1 | 68024518 | 68024638 | FALSE | ALL_ZERO | 0.0 | NA | NA | NA | NA | NA | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 |
| E006 | chr1 | 68026573 | 68026762 | FALSE | ALL_ZERO | 0.0 | NA | NA | NA | NA | NA | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 |
| E007 | chr1 | 68034646 | 68034763 | FALSE | LOW_COUNTS_INDEP_FILTER | 0.3 | 0.395 | 0.9068 | NA | NA | NA | 0.0 | 0.0 | 1.0 | 0.0 | 1.0 | 0.0 |
| E008 | chr1 | 68071799 | 68071873 | FALSE | LOW_COUNTS_INDEP_FILTER | 1.5 | 0.632 | 0.4955 | NA | NA | NA | 0.0 | 0.0 | 2.0 | 0.0 | 1.0 | 5.8 |
| E009 | chr1 | 68098642 | 68098836 | TRUE | OK | 52.5 | 0.0199 | 9.132e-06 | 0.005117 | -1.529 | -0.762 | 55.2 | 67.8 | 56.4 | 55.6 | 38.2 | 41.6 |
| E010 | chr1 | 68099728 | 68099792 | FALSE | LOW_COUNTS_INDEP_FILTER | 3.9 | 0.0409 | 0.02385 | NA | NA | NA | 1.0 | 1.0 | 3.0 | 6.0 | 4.9 | 7.7 |
| E011 | chr1 | 68100697 | 68100774 | FALSE | LOW_COUNTS_INDEP_FILTER | 1.3 | 0.127 | 0.07822 | NA | NA | NA | 0.0 | 0.0 | 1.0 | 2.0 | 3.9 | 1.0 |
| E012 | chr1 | 68102654 | 68102727 | FALSE | LOW_COUNTS_INDEP_FILTER | 2.5 | 0.191 | 0.5981 | NA | NA | NA | 1.0 | 1.0 | 3.0 | 6.9 | 0.0 | 2.9 |
| E013 | chr1 | 68117450 | 68117732 | FALSE | LOW_COUNTS_INDEP_FILTER | 7.4 | 0.0296 | 0.001668 | NA | NA | NA | 4.9 | 0.0 | 4.0 | 16.9 | 8.8 | 9.7 |
| E014 | chr1 | 68121124 | 68121241 | TRUE | OK | 14.8 | 0.0185 | 0.004294 | 0.2759 | 1.209 | 0.604 | 11.8 | 5.2 | 9.1 | 29.8 | 17.6 | 15.5 |
| E015 | chr1 | 68138296 | 68138356 | FALSE | LOW_COUNTS_INDEP_FILTER | 4.8 | 0.0348 | 0.01203 | NA | NA | NA | 3.0 | 0.0 | 3.0 | 7.9 | 8.8 | 5.8 |
| E016 | chr1 | 68138356 | 68138450 | FALSE | LOW_COUNTS_INDEP_FILTER | 4.6 | 0.0391 | 0.1057 | NA | NA | NA | 4.9 | 1.0 | 2.0 | 7.9 | 7.8 | 3.9 |
| E017 | chr1 | 68141424 | 68141788 | FALSE | LOW_COUNTS_INDEP_FILTER | 6.4 | 0.112 | 0.1461 | NA | NA | NA | 5.9 | 2.1 | 3.0 | 5.0 | 15.7 | 6.8 |
| E018 | chr1 | 68201968 | 68202987 | FALSE | LOW_COUNTS_INDEP_FILTER | 0.6 | 0.412 | 0.1317 | NA | NA | NA | 0.0 | 0.0 | 0.0 | 0.0 | 1.0 | 2.9 |
| J019 | chr1 | 67832436 | 67956155 | FALSE | ALL_ZERO | 0.0 | NA | NA | NA | NA | NA | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 |
| J020 | chr1 | 67832436 | 68034646 | FALSE | ALL_ZERO | 0.0 | NA | NA | NA | NA | NA | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 |
| J021 | chr1 | 67955784 | 67956155 | FALSE | ALL_ZERO | 0.0 | NA | NA | NA | NA | NA | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 |
| J022 | chr1 | 67956262 | 68024518 | FALSE | ALL_ZERO | 0.0 | NA | NA | NA | NA | NA | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 |
| J023 | chr1 | 67956262 | 68071799 | FALSE | ALL_ZERO | 0.0 | NA | NA | NA | NA | NA | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 |
| J024 | chr1 | 68024638 | 68026573 | FALSE | ALL_ZERO | 0.0 | NA | NA | NA | NA | NA | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 |
| J025 | chr1 | 68034763 | 68071799 | FALSE | LOW_COUNTS_INDEP_FILTER | 0.3 | 0.266 | 0.9019 | NA | NA | NA | 0.0 | 0.0 | 1.0 | 0.0 | 1.0 | 0.0 |
| J026 | chr1 | 68071873 | 68098642 | FALSE | LOW_COUNTS_INDEP_FILTER | 0.2 | 0.554 | 0.4844 | NA | NA | NA | 0.0 | 0.0 | 1.0 | 0.0 | 0.0 | 0.0 |
| J027 | chr1 | 68098836 | 68099728 | FALSE | LOW_COUNTS_INDEP_FILTER | 0.5 | 0.221 | 0.1551 | NA | NA | NA | 0.0 | 0.0 | 0.0 | 1.0 | 0.0 | 1.9 |
| J028 | chr1 | 68099792 | 68100697 | FALSE | LOW_COUNTS_INDEP_FILTER | 0.7 | 0.347 | 0.1178 | NA | NA | NA | 0.0 | 0.0 | 0.0 | 0.0 | 2.9 | 1.0 |
| J029 | chr1 | 68099792 | 68102654 | FALSE | LOW_COUNTS_INDEP_FILTER | 0.3 | 0.472 | 0.393 | NA | NA | NA | 0.0 | 0.0 | 0.0 | 2.0 | 0.0 | 0.0 |
| J030 | chr1 | 68100774 | 68117450 | FALSE | LOW_COUNTS_INDEP_FILTER | 0.5 | 0.913 | 0.4162 | NA | NA | NA | 0.0 | 0.0 | 0.0 | 0.0 | 2.9 | 0.0 |
| J031 | chr1 | 68102727 | 68117450 | FALSE | LOW_COUNTS_INDEP_FILTER | 0.7 | 0.201 | 0.09346 | NA | NA | NA | 0.0 | 0.0 | 0.0 | 3.0 | 0.0 | 1.0 |
| J032 | chr1 | 68117732 | 68121124 | FALSE | LOW_COUNTS_INDEP_FILTER | 1.3 | 0.302 | 0.1919 | NA | NA | NA | 1.0 | 0.0 | 0.0 | 6.0 | 1.0 | 0.0 |
| J033 | chr1 | 68121241 | 68138296 | FALSE | LOW_COUNTS_INDEP_FILTER | 0.7 | 0.155 | 0.8333 | NA | NA | NA | 1.0 | 0.0 | 1.0 | 2.0 | 0.0 | 0.0 |
| J034 | chr1 | 68121241 | 68201968 | FALSE | ALL_ZERO | 0.0 | NA | NA | NA | NA | NA | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 |
| J035 | chr1 | 68138450 | 68141424 | FALSE | LOW_COUNTS_INDEP_FILTER | 1.8 | 0.0462 | 0.2503 | NA | NA | NA | 1.0 | 1.0 | 1.0 | 3.0 | 2.9 | 1.9 |
| J036 | chr1 | 68138450 | 68201968 | FALSE | ALL_ZERO | 0.0 | NA | NA | NA | NA | NA | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 |
| N037 | chr1 | 67777507 | 67833343 | FALSE | ALL_ZERO | 804.8 | NA | NA | NA | NA | NA | 861.8 | 463.0 | 741.3 | 976.9 | 842.2 | 943.6 |
| N038 | chr1 | 68098753 | 68137779 | TRUE | OK | 39.8 | 0.00786 | 0.001154 | 0.143 | -0.945 | -0.472 | 41.4 | 50.1 | 40.3 | 39.7 | 33.3 | 33.8 |
| N039 | chr1 | 68126335 | 68137779 | FALSE | ALL_ZERO | 403.7 | NA | NA | NA | NA | NA | 435.8 | 404.6 | 361.6 | 406.1 | 397.6 | 416.7 |
| N040 | chr1 | 68137933 | 68144568 | FALSE | ALL_ZERO | 348.3 | NA | NA | NA | NA | NA | 360.9 | 337.8 | 318.3 | 374.3 | 362.3 | 336.5 |
| N041 | chr1 | 68144652 | 68145868 | FALSE | ALL_ZERO | 322.0 | NA | NA | NA | NA | NA | 343.1 | 237.7 | 285.0 | 367.3 | 343.7 | 354.8 |
| N042 | chr1 | 68146012 | 68148135 | FALSE | ALL_ZERO | 331.7 | NA | NA | NA | NA | NA | 364.8 | 261.7 | 304.2 | 349.5 | 332.0 | 378.0 |
| N043 | chr1 | 68148199 | 68148562 | FALSE | ALL_ZERO | 301.7 | NA | NA | NA | NA | NA | 329.3 | 250.3 | 269.9 | 338.5 | 283.0 | 339.4 |
| N044 | chr1 | 68148660 | 68150187 | FALSE | ALL_ZERO | 414.2 | NA | NA | NA | NA | NA | 455.5 | 375.4 | 386.8 | 449.7 | 355.5 | 462.1 |
| N045 | chr1 | 68150356 | 68153516 | FALSE | ALL_ZERO | 578.6 | NA | NA | NA | NA | NA | 657.7 | 522.4 | 537.9 | 612.6 | 532.7 | 608.1 |
| N046 | chr1 | 68153653 | 68155098 | FALSE | ALL_ZERO | 551.5 | NA | NA | NA | NA | NA | 599.5 | 509.9 | 565.1 | 562.9 | 498.5 | 573.3 |
| N047 | chr1 | 68155260 | 68159122 | FALSE | ALL_ZERO | 445.9 | NA | NA | NA | NA | NA | 452.6 | 365.0 | 480.4 | 478.5 | 437.7 | 461.2 |
| N048 | chr1 | 68159247 | 68193954 | FALSE | ALL_ZERO | 381.1 | NA | NA | NA | NA | NA | 416.1 | 279.4 | 378.7 | 421.9 | 404.4 | 385.8 |
| N049 | chr1 | 68194227 | 68232193 | FALSE | ALL_ZERO | 404.1 | NA | NA | NA | NA | NA | 439.8 | 288.8 | 456.3 | 431.9 | 345.7 | 462.1 |
| Color Codes | |||||
|---|---|---|---|---|---|
| NO TEST | p > 0.05 | p < 0.05 | p < 0.005 | p < 5e-04 | p < 5e-05 |
| Gene ENSG00000232284.7 | |||||||
|---|---|---|---|---|---|---|---|
| expr | exprTX | normCt | normCtTX | rExpr | rExprTX | rawCt | rawCtTX |
| PLOT | PLOT | PLOT | PLOT | PLOT | PLOT | PLOT | PLOT |
| TABLE | TABLE | TABLE | TABLE | TABLE | TABLE | TABLE | TABLE |