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binID | chr | start | end | testable | status | baseMean | dispersion | pvalue | padjust | log2FC (yes/no) | log2FCvst (yes/no) | Normalized Coverage Counts | |||||
MCF10A-KI-DMSO-7 | MCF10A-KI-DMSO-8 | MCF10A-KI-DMSO-9 | MCF10A-KI-BYL719-10 | MCF10A-KI-BYL719-11 | MCF10A-KI-BYL719-12 | ||||||||||||
E001 | chr5 | 140537339 | 140537661 | TRUE | OK | 872.0 | 0.0151 | 0.002125 | 0.1969 | 0.656 | 0.328 | 849.0 | 697.6 | 806.8 | 928.3 | 1020.4 | 930.1 |
E002 | chr5 | 140550067 | 140550533 | TRUE | OK | 330.8 | 0.00713 | 0.1027 | 0.7006 | -0.279 | -0.139 | 332.3 | 516.1 | 314.3 | 290.9 | 261.5 | 269.7 |
E003 | chr5 | 140550533 | 140550551 | TRUE | OK | 334.7 | 0.00161 | 0.506 | 0.8578 | -0.065 | -0.033 | 333.3 | 444.2 | 331.4 | 300.8 | 301.6 | 296.8 |
E004 | chr5 | 140550551 | 140550681 | TRUE | OK | 887.2 | 0.00232 | 0.08477 | 0.6833 | -0.166 | -0.083 | 899.2 | 1226.2 | 880.3 | 777.4 | 762.9 | 777.3 |
E005 | chr5 | 140550681 | 140550840 | TRUE | OK | 1625.9 | 0.00311 | 0.1833 | 0.7504 | -0.143 | -0.072 | 1618.0 | 2204.3 | 1615.6 | 1460.4 | 1398.4 | 1459.0 |
E006 | chr5 | 140550840 | 140550911 | TRUE | OK | 1307.6 | 0.00219 | 0.1014 | 0.6994 | -0.147 | -0.074 | 1339.0 | 1742.4 | 1309.4 | 1195.3 | 1085.0 | 1174.7 |
E007 | chr5 | 140551060 | 140551128 | TRUE | OK | 1191.8 | 0.0038 | 0.06345 | 0.6527 | -0.209 | -0.104 | 1261.1 | 1617.3 | 1183.5 | 1089.1 | 931.3 | 1068.4 |
E008 | chr5 | 140551128 | 140551169 | TRUE | OK | 967.0 | 0.00393 | 0.06211 | 0.6507 | -0.210 | -0.105 | 1048.1 | 1284.6 | 974.0 | 867.7 | 735.4 | 892.4 |
E009 | chr5 | 140551169 | 140551981 | TRUE | OK | 70.4 | 0.00421 | 0.1207 | 0.7165 | -0.272 | -0.136 | 77.9 | 83.4 | 86.6 | 55.6 | 60.7 | 58.0 |
E010 | chr5 | 140551981 | 140552184 | TRUE | OK | 1892.1 | 0.00376 | 0.06063 | 0.6489 | -0.201 | -0.100 | 2026.2 | 2423.3 | 1927.8 | 1735.4 | 1506.1 | 1733.5 |
E011 | chr5 | 140557146 | 140557272 | TRUE | OK | 1269.9 | 0.00199 | 0.05698 | 0.6418 | -0.156 | -0.078 | 1370.6 | 1589.1 | 1313.4 | 1169.5 | 1035.1 | 1141.8 |
E012 | chr5 | 140557272 | 140557332 | TRUE | OK | 134.3 | 0.00262 | 0.001301 | 0.1525 | -0.430 | -0.215 | 162.7 | 174.1 | 156.1 | 111.2 | 99.9 | 101.5 |
E013 | chr5 | 140557332 | 140557427 | TRUE | OK | 72.1 | 0.0106 | 0.2918 | 0.7892 | -0.223 | -0.112 | 92.7 | 76.1 | 81.6 | 70.5 | 50.9 | 60.9 |
E014 | chr5 | 140557427 | 140557446 | TRUE | OK | 601.9 | 0.00294 | 0.5775 | 0.8806 | -0.051 | -0.026 | 635.0 | 725.7 | 622.5 | 571.8 | 482.8 | 573.3 |
E015 | chr5 | 140557446 | 140557456 | TRUE | OK | 348.1 | 0.00166 | 0.7859 | 0.9459 | -0.023 | -0.011 | 353.0 | 426.5 | 359.6 | 313.7 | 296.7 | 339.4 |
E016 | chr5 | 140557456 | 140557677 | TRUE | OK | 113.6 | 0.0109 | 0.6791 | 0.9133 | 0.100 | 0.050 | 108.5 | 136.6 | 112.8 | 79.4 | 118.5 | 125.7 |
E017 | chr5 | 140557677 | 140558252 | TRUE | OK | 63.3 | 0.0125 | 0.1641 | 0.7412 | 0.349 | 0.174 | 64.1 | 61.5 | 57.4 | 48.6 | 79.3 | 68.6 |
J018 | chr5 | 140537661 | 140550840 | FALSE | LOW_COUNTS_INDEP_FILTER | 1.0 | 0.143 | 0.173 | NA | NA | NA | 0.0 | 2.1 | 3.0 | 0.0 | 0.0 | 1.0 |
J019 | chr5 | 140550911 | 140551060 | TRUE | OK | 977.0 | 0.00253 | 0.2119 | 0.7622 | -0.123 | -0.061 | 986.0 | 1314.9 | 971.0 | 909.4 | 796.2 | 884.7 |
J020 | chr5 | 140551169 | 140551981 | TRUE | OK | 758.4 | 0.00433 | 0.09364 | 0.6922 | -0.201 | -0.100 | 809.5 | 1028.1 | 757.4 | 668.1 | 569.9 | 717.4 |
J021 | chr5 | 140551169 | 140557146 | TRUE | OK | 12.5 | 0.00878 | 0.99 | 0.9976 | 0.001 | 0.001 | 13.8 | 12.5 | 14.1 | 12.9 | 11.8 | 9.7 |
J022 | chr5 | 140552184 | 140557146 | TRUE | OK | 1098.1 | 0.00299 | 0.1119 | 0.7093 | -0.153 | -0.077 | 1196.0 | 1375.3 | 1128.1 | 1028.5 | 864.7 | 995.8 |
J023 | chr5 | 140557272 | 140557427 | TRUE | OK | 582.2 | 0.00241 | 0.6838 | 0.9148 | -0.033 | -0.017 | 616.3 | 698.6 | 594.3 | 558.9 | 471.0 | 554.0 |
J024 | chr5 | 140557332 | 140557427 | FALSE | LOW_COUNTS_INDEP_FILTER | 1.2 | 0.498 | 0.8113 | NA | NA | NA | 0.0 | 1.0 | 3.0 | 0.0 | 2.9 | 0.0 |
N025 | chr5 | 140535538 | 140537388 | TRUE | OK | 113.4 | 0.016 | 0.01958 | 0.4883 | 0.557 | 0.279 | 126.2 | 84.5 | 93.7 | 130.1 | 118.5 | 127.6 |
N026 | chr5 | 140537589 | 140538085 | TRUE | OK | 379.4 | 0.014 | 0.02322 | 0.5144 | 0.478 | 0.239 | 384.5 | 309.7 | 365.6 | 369.3 | 418.2 | 429.3 |
N027 | chr5 | 140537589 | 140538088 | TRUE | OK | 11.4 | 0.00872 | 0.05347 | 0.6339 | 0.745 | 0.373 | 8.9 | 9.4 | 10.1 | 12.9 | 13.7 | 13.5 |
N028 | chr5 | 140538234 | 140538918 | TRUE | OK | 66.0 | 0.016 | 0.06096 | 0.6495 | 0.485 | 0.243 | 61.1 | 48.0 | 72.5 | 74.5 | 74.4 | 65.7 |
N029 | chr5 | 140538261 | 140538918 | TRUE | OK | 361.9 | 0.00661 | 0.00547 | 0.3068 | 0.428 | 0.214 | 330.3 | 343.1 | 354.5 | 345.5 | 419.1 | 379.0 |
N030 | chr5 | 140539083 | 140539358 | TRUE | OK | 162.0 | 0.0018 | 0.01183 | 0.4137 | 0.301 | 0.150 | 159.7 | 166.8 | 151.1 | 160.8 | 157.7 | 176.0 |
N031 | chr5 | 140539083 | 140542171 | TRUE | OK | 225.7 | 0.00201 | 1.752e-05 | 0.008605 | 0.475 | 0.238 | 205.1 | 228.4 | 194.4 | 225.4 | 262.4 | 238.8 |
N032 | chr5 | 140542281 | 140548905 | TRUE | OK | 221.2 | 0.00141 | 0.006485 | 0.3295 | 0.279 | 0.140 | 195.2 | 259.6 | 203.5 | 217.4 | 235.0 | 216.6 |
N033 | chr5 | 140547840 | 140548905 | TRUE | OK | 35.1 | 0.017 | 0.1154 | 0.7126 | 0.472 | 0.236 | 41.4 | 28.2 | 27.2 | 45.7 | 30.4 | 37.7 |
N034 | chr5 | 140549076 | 140549233 | TRUE | OK | 299.6 | 0.00512 | 0.014 | 0.4379 | 0.329 | 0.164 | 268.2 | 373.3 | 236.7 | 310.7 | 327.1 | 281.3 |
Color Codes | |||||
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NO TEST | p > 0.05 | p < 0.05 | p < 0.005 | p < 5e-04 | p < 5e-05 |
Gene ENSG00000213523.10 | |||||||
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expr | exprTX | normCt | normCtTX | rExpr | rExprTX | rawCt | rawCtTX |
PLOT | PLOT | PLOT | PLOT | PLOT | PLOT | PLOT | PLOT |
TABLE | TABLE | TABLE | TABLE | TABLE | TABLE | TABLE | TABLE |