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binID | chr | start | end | testable | status | baseMean | dispersion | pvalue | padjust | log2FC (yes/no) | log2FCvst (yes/no) | Normalized Coverage Counts | |||||
MCF10A-KI-DMSO-7 | MCF10A-KI-DMSO-8 | MCF10A-KI-DMSO-9 | MCF10A-KI-BYL719-10 | MCF10A-KI-BYL719-11 | MCF10A-KI-BYL719-12 | ||||||||||||
E001 | chr5 | 177403203 | 177403526 | TRUE | OK | 746.5 | 0.0019 | 1.236e-09 | 2.557e-06 | -0.528 | -0.264 | 743.5 | 1012.5 | 746.4 | 704.9 | 636.5 | 635.2 |
E002 | chr5 | 177404405 | 177404557 | TRUE | OK | 93.8 | 0.00365 | 0.07183 | 0.6658 | -0.280 | -0.140 | 92.7 | 103.2 | 100.7 | 90.3 | 80.3 | 95.7 |
E003 | chr5 | 177426495 | 177426619 | FALSE | LOW_COUNTS_INDEP_FILTER | 2.8 | 0.17 | 0.7261 | NA | NA | NA | 4.9 | 1.0 | 1.0 | 1.0 | 2.9 | 5.8 |
E004 | chr5 | 177426675 | 177426744 | TRUE | OK | 201.4 | 1.1 | 0.398 | 0.8233 | -0.765 | -0.383 | 275.1 | 241.9 | 214.5 | 281.0 | 194.9 | 1.0 |
E005 | chr5 | 177426744 | 177426793 | TRUE | OK | 249.6 | 0.613 | 0.3405 | 0.8042 | -0.652 | -0.326 | 326.4 | 282.6 | 268.9 | 356.4 | 252.7 | 10.6 |
E006 | chr5 | 177426793 | 177426842 | TRUE | OK | 273.8 | 0.324 | 0.2906 | 0.7888 | -0.604 | -0.302 | 351.0 | 311.8 | 287.1 | 386.2 | 270.3 | 36.7 |
E007 | chr5 | 177426842 | 177426853 | TRUE | OK | 267.6 | 0.178 | 0.196 | 0.7563 | -0.570 | -0.285 | 346.1 | 298.2 | 275.0 | 374.3 | 267.3 | 44.5 |
E008 | chr5 | 177426853 | 177426897 | TRUE | OK | 336.5 | 0.082 | 0.196 | 0.7563 | -0.452 | -0.226 | 411.2 | 368.1 | 336.4 | 449.7 | 335.9 | 118.0 |
E009 | chr5 | 177430675 | 177430871 | TRUE | OK | 15.5 | 0.0171 | 0.2827 | 0.7858 | -0.387 | -0.193 | 14.8 | 17.7 | 18.1 | 10.9 | 20.6 | 10.6 |
E010 | chr5 | 177430871 | 177430967 | TRUE | OK | 581.2 | 0.0191 | 0.4425 | 0.8372 | -0.144 | -0.072 | 625.1 | 592.3 | 530.8 | 741.6 | 569.0 | 428.3 |
E011 | chr5 | 177431710 | 177431994 | TRUE | OK | 13.3 | 0.0296 | 0.2909 | 0.789 | -0.457 | -0.228 | 12.8 | 10.4 | 21.2 | 11.9 | 13.7 | 9.7 |
E012 | chr5 | 177431994 | 177432107 | TRUE | OK | 558.4 | 0.00613 | 0.5036 | 0.8569 | 0.104 | 0.052 | 543.3 | 533.9 | 473.4 | 655.2 | 531.7 | 613.0 |
E013 | chr5 | 177432232 | 177432257 | TRUE | OK | 622.7 | 0.00779 | 0.1676 | 0.7431 | 0.224 | 0.112 | 589.6 | 545.3 | 525.8 | 703.9 | 634.6 | 736.7 |
E014 | chr5 | 177432257 | 177432310 | TRUE | OK | 721.9 | 0.00521 | 0.1635 | 0.7408 | 0.189 | 0.094 | 668.5 | 661.1 | 621.5 | 815.1 | 738.4 | 826.6 |
E015 | chr5 | 177432705 | 177432806 | TRUE | OK | 677.1 | 0.00288 | 0.2244 | 0.7666 | 0.130 | 0.065 | 608.4 | 645.4 | 611.4 | 743.6 | 714.9 | 738.7 |
E016 | chr5 | 177433146 | 177433189 | TRUE | OK | 613.1 | 0.00147 | 0.1027 | 0.7006 | 0.136 | 0.068 | 547.2 | 618.3 | 519.7 | 659.2 | 668.8 | 665.2 |
E017 | chr5 | 177433189 | 177433239 | TRUE | OK | 516.6 | 0.00208 | 0.2169 | 0.7636 | 0.118 | 0.059 | 482.2 | 523.4 | 422.0 | 556.0 | 560.1 | 555.9 |
E018 | chr5 | 177433346 | 177433410 | TRUE | OK | 591.7 | 0.00201 | 0.1055 | 0.7031 | 0.148 | 0.074 | 547.2 | 599.6 | 472.4 | 654.2 | 638.5 | 638.1 |
E019 | chr5 | 177433535 | 177433676 | TRUE | OK | 1124.0 | 0.000916 | 0.00101 | 0.1327 | 0.213 | 0.106 | 935.7 | 1129.3 | 966.9 | 1260.8 | 1231.0 | 1220.1 |
E020 | chr5 | 177433913 | 177434015 | TRUE | OK | 1171.7 | 0.00183 | 0.001325 | 0.154 | 0.263 | 0.132 | 967.3 | 1155.3 | 991.1 | 1320.4 | 1248.6 | 1347.8 |
E021 | chr5 | 177434015 | 177434030 | TRUE | OK | 799.7 | 0.00316 | 0.002609 | 0.219 | 0.318 | 0.159 | 646.8 | 765.4 | 660.7 | 915.4 | 839.2 | 970.7 |
E022 | chr5 | 177434030 | 177434104 | TRUE | OK | 960.0 | 0.0034 | 0.005571 | 0.3094 | 0.297 | 0.148 | 790.8 | 939.5 | 783.6 | 1081.1 | 1001.8 | 1163.1 |
E023 | chr5 | 177434901 | 177434939 | TRUE | OK | 739.4 | 0.0077 | 0.1265 | 0.7212 | 0.237 | 0.119 | 660.6 | 752.8 | 554.0 | 833.0 | 717.8 | 918.5 |
E024 | chr5 | 177435031 | 177435121 | TRUE | OK | 833.7 | 0.00982 | 0.2519 | 0.7758 | 0.203 | 0.102 | 765.1 | 841.5 | 639.6 | 942.2 | 775.6 | 1038.4 |
E025 | chr5 | 177436072 | 177436121 | TRUE | OK | 705.1 | 0.0075 | 0.3465 | 0.806 | 0.139 | 0.069 | 649.8 | 762.2 | 525.8 | 759.5 | 688.4 | 845.0 |
E026 | chr5 | 177436121 | 177436281 | TRUE | OK | 1011.3 | 0.00252 | 0.3038 | 0.7926 | 0.092 | 0.046 | 903.2 | 1111.5 | 812.8 | 1101.0 | 1025.3 | 1113.8 |
E027 | chr5 | 177436392 | 177436530 | TRUE | OK | 802.3 | 0.00179 | 0.4377 | 0.8354 | 0.060 | 0.030 | 714.9 | 904.0 | 644.6 | 870.7 | 843.2 | 836.3 |
E028 | chr5 | 177436530 | 177436685 | TRUE | OK | 108.8 | 0.0197 | 0.09552 | 0.6944 | -0.488 | -0.244 | 119.3 | 173.1 | 74.5 | 93.3 | 101.8 | 90.9 |
E029 | chr5 | 177440699 | 177440837 | TRUE | OK | 480.0 | 0.00175 | 0.02684 | 0.5362 | 0.197 | 0.099 | 369.8 | 507.8 | 413.0 | 548.0 | 539.6 | 501.8 |
E030 | chr5 | 177440918 | 177441053 | TRUE | OK | 399.3 | 0.00379 | 0.1256 | 0.7206 | 0.171 | 0.085 | 299.7 | 464.0 | 319.3 | 454.7 | 428.9 | 429.3 |
E031 | chr5 | 177441244 | 177441353 | TRUE | OK | 19.3 | 0.00976 | 0.3848 | 0.8187 | -0.268 | -0.134 | 17.7 | 19.8 | 23.2 | 16.9 | 16.6 | 21.3 |
E032 | chr5 | 177441734 | 177441736 | TRUE | OK | 82.9 | 0.0165 | 0.01285 | 0.4241 | 0.607 | 0.304 | 44.4 | 89.7 | 54.4 | 84.4 | 113.6 | 111.2 |
E033 | chr5 | 177441736 | 177442064 | TRUE | OK | 517.8 | 0.00327 | 0.109 | 0.7068 | 0.169 | 0.084 | 407.2 | 576.6 | 423.0 | 539.1 | 584.6 | 576.2 |
E034 | chr5 | 177442064 | 177442625 | TRUE | OK | 536.1 | 0.00295 | 0.1443 | 0.7323 | 0.154 | 0.077 | 437.8 | 563.1 | 463.3 | 552.0 | 579.7 | 620.7 |
E035 | chr5 | 177442625 | 177442891 | TRUE | OK | 51.6 | 0.00748 | 0.07281 | 0.6672 | -0.384 | -0.192 | 58.2 | 50.1 | 60.4 | 50.6 | 43.1 | 47.4 |
E036 | chr5 | 177442891 | 177442901 | TRUE | OK | 14.8 | 0.0143 | 0.003642 | 0.2555 | -1.073 | -0.537 | 19.7 | 16.7 | 22.2 | 11.9 | 6.9 | 11.6 |
J037 | chr5 | 177403526 | 177430871 | FALSE | LOW_COUNTS_INDEP_FILTER | 0.2 | 0.55 | 0.5085 | NA | NA | NA | 0.0 | 0.0 | 1.0 | 0.0 | 0.0 | 0.0 |
J038 | chr5 | 177404557 | 177430871 | FALSE | ALL_ZERO | 0.0 | NA | NA | NA | NA | NA | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 |
J039 | chr5 | 177426619 | 177430871 | FALSE | LOW_COUNTS_INDEP_FILTER | 2.0 | 0.289 | 0.7971 | NA | NA | NA | 3.9 | 1.0 | 1.0 | 0.0 | 1.0 | 4.8 |
J040 | chr5 | 177426897 | 177430675 | FALSE | LOW_COUNTS_INDEP_FILTER | 1.0 | 0.0968 | 0.3702 | NA | NA | NA | 1.0 | 2.1 | 1.0 | 2.0 | 0.0 | 0.0 |
J041 | chr5 | 177426897 | 177430871 | TRUE | OK | 293.2 | 0.0758 | 0.2902 | 0.7887 | -0.342 | -0.171 | 346.1 | 299.3 | 296.1 | 400.1 | 299.7 | 118.0 |
J042 | chr5 | 177430967 | 177431994 | TRUE | OK | 380.5 | 0.00588 | 0.8691 | 0.9682 | -0.015 | -0.007 | 382.6 | 396.2 | 320.3 | 449.7 | 340.8 | 393.5 |
J043 | chr5 | 177432107 | 177432232 | TRUE | OK | 425.5 | 0.00555 | 0.07696 | 0.6738 | 0.252 | 0.126 | 393.4 | 377.5 | 349.5 | 486.5 | 437.7 | 508.6 |
J044 | chr5 | 177432310 | 177432705 | TRUE | OK | 512.8 | 0.00454 | 0.3494 | 0.8072 | 0.125 | 0.063 | 477.2 | 481.7 | 454.3 | 557.9 | 515.1 | 590.7 |
J045 | chr5 | 177432310 | 177433146 | FALSE | LOW_COUNTS_INDEP_FILTER | 0.7 | 0.152 | 0.4087 | NA | NA | NA | 0.0 | 1.0 | 0.0 | 0.0 | 2.0 | 1.0 |
J046 | chr5 | 177432806 | 177433146 | TRUE | OK | 511.4 | 0.000895 | 0.08931 | 0.6885 | 0.129 | 0.064 | 444.7 | 513.0 | 450.2 | 557.9 | 548.4 | 554.0 |
J047 | chr5 | 177433239 | 177433346 | TRUE | OK | 395.4 | 0.00319 | 0.1191 | 0.7153 | 0.173 | 0.087 | 368.8 | 407.7 | 294.1 | 425.9 | 435.8 | 439.9 |
J048 | chr5 | 177433410 | 177433535 | TRUE | OK | 429.6 | 0.00106 | 0.2384 | 0.7716 | 0.097 | 0.048 | 393.4 | 449.4 | 352.5 | 478.5 | 441.7 | 462.1 |
J049 | chr5 | 177433676 | 177433913 | TRUE | OK | 796.6 | 0.00141 | 0.005806 | 0.315 | 0.215 | 0.107 | 636.0 | 796.6 | 705.1 | 881.6 | 871.6 | 888.5 |
J050 | chr5 | 177433676 | 177434015 | FALSE | LOW_COUNTS_INDEP_FILTER | 1.2 | 0.121 | 0.06104 | NA | NA | NA | 3.0 | 3.1 | 0.0 | 0.0 | 0.0 | 1.0 |
J051 | chr5 | 177434104 | 177434901 | TRUE | OK | 643.1 | 0.00575 | 0.04423 | 0.6078 | 0.275 | 0.138 | 551.2 | 649.6 | 485.5 | 725.7 | 641.4 | 805.4 |
J052 | chr5 | 177434939 | 177435031 | TRUE | OK | 591.3 | 0.0103 | 0.2284 | 0.7684 | 0.218 | 0.109 | 544.3 | 601.6 | 434.1 | 667.2 | 552.3 | 748.3 |
J053 | chr5 | 177435121 | 177436072 | TRUE | OK | 483.4 | 0.0123 | 0.4668 | 0.8449 | 0.147 | 0.074 | 456.5 | 506.8 | 358.6 | 548.0 | 425.0 | 605.2 |
J054 | chr5 | 177436281 | 177436392 | TRUE | OK | 553.2 | 0.000773 | 0.9557 | 0.9896 | 0.004 | 0.002 | 493.0 | 623.5 | 472.4 | 600.6 | 556.2 | 573.3 |
J055 | chr5 | 177436530 | 177440699 | TRUE | OK | 300.8 | 0.00104 | 5.617e-05 | 0.02063 | 0.359 | 0.179 | 240.6 | 283.6 | 235.7 | 343.5 | 352.5 | 349.0 |
J056 | chr5 | 177440837 | 177440918 | TRUE | OK | 241.7 | 0.00725 | 0.3378 | 0.8033 | 0.134 | 0.067 | 166.6 | 296.1 | 200.4 | 282.9 | 254.6 | 249.4 |
J057 | chr5 | 177441053 | 177441244 | FALSE | LOW_COUNTS_INDEP_FILTER | 2.8 | 0.228 | 0.9709 | NA | NA | NA | 5.9 | 1.0 | 1.0 | 1.0 | 5.9 | 1.9 |
J058 | chr5 | 177441053 | 177441734 | TRUE | OK | 69.5 | 0.00346 | 1.693e-06 | 0.00128 | 0.846 | 0.423 | 38.5 | 59.4 | 44.3 | 82.4 | 97.9 | 94.7 |
J059 | chr5 | 177441053 | 177441736 | TRUE | OK | 130.2 | 0.00475 | 0.6127 | 0.8921 | -0.087 | -0.044 | 112.4 | 168.9 | 104.8 | 144.9 | 116.5 | 133.4 |
N060 | chr5 | 177402698 | 177403253 | TRUE | OK | 364.6 | 0.00182 | 2.624e-06 | 0.001879 | -0.455 | -0.227 | 364.8 | 499.5 | 345.5 | 343.5 | 315.3 | 319.1 |
N061 | chr5 | 177402863 | 177403253 | TRUE | OK | 17.4 | 0.0308 | 0.3132 | 0.7953 | -0.418 | -0.209 | 23.7 | 22.9 | 11.1 | 10.9 | 14.7 | 21.3 |
N062 | chr5 | 177403397 | 177403480 | TRUE | OK | 231.9 | 0.00397 | 0.02884 | 0.5468 | -0.287 | -0.143 | 202.1 | 276.3 | 254.8 | 229.3 | 199.8 | 229.1 |
N063 | chr5 | 177403617 | 177403858 | TRUE | OK | 63.5 | 0.0034 | 0.2939 | 0.7896 | -0.186 | -0.093 | 51.3 | 76.1 | 67.5 | 57.6 | 61.7 | 66.7 |
N064 | chr5 | 177404090 | 177404195 | TRUE | OK | 94.4 | 0.00295 | 0.3486 | 0.807 | -0.140 | -0.070 | 82.8 | 113.7 | 88.6 | 112.2 | 86.2 | 83.1 |
N065 | chr5 | 177433669 | 177433913 | TRUE | OK | 14.0 | 0.00978 | 0.0001558 | 0.04203 | 1.444 | 0.722 | 10.8 | 4.2 | 6.0 | 21.8 | 22.5 | 18.4 |
Color Codes | |||||
---|---|---|---|---|---|
NO TEST | p > 0.05 | p < 0.05 | p < 0.005 | p < 5e-04 | p < 5e-05 |
Gene ENSG00000198055.11 | |||||||
---|---|---|---|---|---|---|---|
expr | exprTX | normCt | normCtTX | rExpr | rExprTX | rawCt | rawCtTX |
PLOT | PLOT | PLOT | PLOT | PLOT | PLOT | PLOT | PLOT |
TABLE | TABLE | TABLE | TABLE | TABLE | TABLE | TABLE | TABLE |