Normalized Counts Table (ENSG00000138640.15)

binID	chr	start	end	testable	status	baseMean	dispersion	pvalue	padjust	log2FC (yes/no)	log2FCvst (yes/no)	Normalized Coverage Counts
binID	chr	start	end	testable	status	baseMean	dispersion	pvalue	padjust	log2FC (yes/no)	log2FCvst (yes/no)	MCF10A-KI-DMSO-7	MCF10A-KI-DMSO-8	MCF10A-KI-DMSO-9	MCF10A-KI-BYL719-10	MCF10A-KI-BYL719-11	MCF10A-KI-BYL719-12
E001	chr4	88725954	88725959	FALSE	LOW_COUNTS_INDEP_FILTER	1.0	0.125	0.9668	NA	NA	NA	1.0	1.0	0.0	1.0	1.0	1.9
E002	chr4	88725959	88727068	TRUE	OK	294.8	0.018	0.9361	0.985	-0.016	-0.008	168.6	240.9	181.3	322.7	444.6	410.9
E003	chr4	88727068	88727425	TRUE	OK	255.2	0.00938	0.3997	0.8239	0.159	0.080	150.9	183.5	141.0	299.8	394.6	361.6
E004	chr4	88727425	88727428	TRUE	OK	104.3	0.00508	0.03114	0.5574	0.385	0.193	66.1	50.1	57.4	125.1	183.1	144.1
E005	chr4	88727428	88727654	TRUE	OK	204.0	0.00493	0.0007043	0.1082	0.516	0.258	125.2	98.0	98.7	273.0	354.5	274.6
E006	chr4	88727654	88728178	TRUE	OK	329.1	0.0029	0.1834	0.7504	0.153	0.077	199.2	187.7	228.6	438.8	467.1	453.4
E007	chr4	88728178	88728659	TRUE	OK	354.7	0.00352	0.6888	0.9164	0.043	0.021	236.6	195.0	261.9	456.7	488.7	489.2
E008	chr4	88731326	88731328	TRUE	OK	106.1	0.00332	0.0113	0.4087	0.409	0.204	64.1	48.0	62.4	129.1	169.4	163.4
E009	chr4	88731328	88731361	TRUE	OK	114.3	0.00332	0.006908	0.3378	0.426	0.213	70.0	50.1	66.5	140.0	184.1	175.0
E010	chr4	88731361	88731397	TRUE	OK	106.9	0.00307	0.007782	0.3561	0.425	0.212	61.1	52.1	61.4	131.0	175.3	160.5
E011	chr4	88731397	88731428	TRUE	OK	95.9	0.00321	0.004202	0.2735	0.478	0.239	48.3	48.0	56.4	121.1	152.8	148.9
E012	chr4	88731428	88731832	FALSE	LOW_COUNTS_INDEP_FILTER	3.5	0.0631	0.2323	NA	NA	NA	5.9	3.1	1.0	2.0	5.9	2.9
E013	chr4	88731832	88732001	FALSE	LOW_COUNTS_INDEP_FILTER	1.1	0.387	0.5074	NA	NA	NA	0.0	0.0	1.0	1.0	4.9	0.0
E014	chr4	88732001	88732021	TRUE	OK	88.2	0.00823	0.01237	0.4191	0.530	0.265	36.5	51.1	49.4	107.2	138.1	147.0
E015	chr4	88732021	88732121	TRUE	OK	134.3	0.00318	0.0009987	0.1318	0.498	0.249	70.0	71.9	70.5	165.8	223.3	204.0
E016	chr4	88732121	88732198	TRUE	OK	113.2	0.00267	0.02548	0.5284	0.338	0.169	66.1	56.3	70.5	142.0	178.2	166.3
E017	chr4	88732198	88732559	FALSE	LOW_COUNTS_INDEP_FILTER	5.4	0.0287	0.9327	NA	NA	NA	4.9	1.0	5.0	5.0	8.8	7.7
E018	chr4	88736360	88736634	FALSE	LOW_COUNTS_INDEP_FILTER	2.6	0.0551	0.264	NA	NA	NA	2.0	1.0	0.0	5.0	4.9	2.9
E019	chr4	88737471	88737555	TRUE	OK	88.6	0.00414	0.009003	0.3779	0.457	0.229	59.2	34.4	48.3	123.1	130.2	136.3
E020	chr4	88737555	88737639	FALSE	LOW_COUNTS_INDEP_FILTER	3.1	0.14	0.9418	NA	NA	NA	3.0	2.1	1.0	1.0	2.9	8.7
E021	chr4	88739029	88739125	TRUE	OK	141.9	0.00254	0.0009019	0.1244	0.465	0.233	90.7	65.7	71.5	189.6	218.4	215.6
E022	chr4	88746931	88747015	TRUE	OK	146.5	0.00285	0.01597	0.4577	0.336	0.168	96.6	70.9	82.6	204.5	210.5	213.7
E023	chr4	88747630	88747851	TRUE	OK	218.8	0.00295	0.004844	0.2915	0.357	0.179	144.9	95.9	130.9	284.9	331.0	324.9
E024	chr4	88748951	88749033	TRUE	OK	147.2	0.0103	0.1118	0.7093	0.300	0.150	100.6	55.3	99.7	192.6	215.4	219.5
E025	chr4	88749770	88749867	TRUE	OK	126.9	0.0149	0.1559	0.7372	0.299	0.150	96.6	44.8	78.6	168.8	184.1	188.5
E026	chr4	88749867	88749909	TRUE	OK	93.4	0.0183	0.2548	0.7774	0.270	0.135	71.0	33.4	59.4	131.0	117.5	147.9
E027	chr4	88750423	88750445	TRUE	OK	77.2	0.018	0.105	0.7024	0.408	0.204	55.2	24.0	47.3	108.2	102.8	125.7
E028	chr4	88750445	88750608	TRUE	OK	137.4	0.0159	0.0261	0.5317	0.507	0.254	95.6	44.8	75.5	174.7	206.6	227.2
E029	chr4	88750608	88750637	TRUE	OK	94.0	0.00837	0.06852	0.6603	0.373	0.186	62.1	37.5	57.4	106.2	146.9	153.7
E030	chr4	88758753	88758789	TRUE	OK	107.3	0.00657	0.006755	0.3347	0.507	0.253	71.0	41.7	55.4	128.1	179.2	168.2
E031	chr4	88758789	88758901	TRUE	OK	138.2	0.0215	0.05565	0.6391	0.474	0.237	101.6	42.8	76.5	176.7	207.6	224.3
E032	chr4	88758901	88759164	FALSE	LOW_COUNTS_INDEP_FILTER	4.3	0.0391	0.3398	NA	NA	NA	3.9	2.1	0.0	7.9	5.9	5.8
E033	chr4	88759164	88759166	FALSE	LOW_COUNTS_INDEP_FILTER	0.7	0.227	0.7895	NA	NA	NA	0.0	1.0	0.0	2.0	1.0	0.0
E034	chr4	88759166	88759469	FALSE	LOW_COUNTS_INDEP_FILTER	1.2	0.11	0.8406	NA	NA	NA	0.0	1.0	1.0	2.0	1.0	1.9
E035	chr4	88767552	88767595	TRUE	OK	102.2	0.00508	0.0009427	0.1277	0.584	0.292	67.0	36.5	50.4	143.0	153.7	162.4
E036	chr4	88767982	88768059	TRUE	OK	98.5	0.00493	0.04254	0.6024	0.353	0.177	69.0	44.8	52.4	134.0	136.1	154.7
E037	chr4	88768059	88768414	FALSE	LOW_COUNTS_INDEP_FILTER	4.6	0.0335	0.01353	NA	NA	NA	3.0	0.0	0.0	7.9	7.8	8.7
E038	chr4	88781164	88781351	TRUE	OK	145.9	0.00332	0.008206	0.364	0.381	0.191	95.6	65.7	82.6	207.5	210.5	213.7
E039	chr4	88787752	88787932	TRUE	OK	135.7	0.00263	0.0002228	0.05332	0.532	0.266	75.9	61.5	73.5	192.6	220.3	190.5
E040	chr4	88790585	88790627	TRUE	OK	91.2	0.00535	0.008372	0.3667	0.489	0.244	59.2	34.4	50.4	114.2	157.7	131.5
E041	chr4	88805010	88805052	TRUE	OK	69.9	0.00899	0.2785	0.7845	0.247	0.123	47.3	31.3	45.3	79.4	125.3	90.9
E042	chr4	88822975	88823201	TRUE	OK	79.6	0.015	1.058e-06	0.0008728	1.304	0.652	38.5	18.8	24.2	103.3	166.5	126.7
E043	chr4	88823201	88823204	TRUE	OK	25.1	0.00986	0.03972	0.5925	0.650	0.325	17.7	9.4	9.1	28.8	45.0	40.6
E044	chr4	88823204	88823230	TRUE	OK	25.1	0.00801	0.0333	0.5667	0.650	0.325	17.7	9.4	9.1	32.8	41.1	40.6
E045	chr4	88823230	88823231	TRUE	OK	9.9	0.0312	0.6886	0.9163	0.169	0.085	10.8	2.1	5.0	15.9	13.7	11.6
E046	chr4	88823231	88823258	TRUE	OK	10.0	0.0219	0.8169	0.9543	0.090	0.045	10.8	3.1	5.0	15.9	13.7	11.6
E047	chr4	88823258	88823361	FALSE	LOW_COUNTS_INDEP_FILTER	7.3	0.0531	0.9301	NA	NA	NA	6.9	2.1	5.0	14.9	7.8	6.8
E048	chr4	88851019	88851183	TRUE	OK	41.1	0.0154	0.359	0.8106	-0.263	-0.132	35.5	22.9	33.2	60.6	55.8	38.7
E049	chr4	88855366	88855509	FALSE	LOW_COUNTS_INDEP_FILTER	1.5	0.413	0.1282	NA	NA	NA	0.0	6.3	1.0	1.0	1.0	0.0
E050	chr4	88855509	88856026	FALSE	LOW_COUNTS_INDEP_FILTER	6.7	0.0264	0.0109	NA	NA	NA	6.9	9.4	6.0	6.9	7.8	2.9
E051	chr4	88905685	88905718	FALSE	LOW_COUNTS_INDEP_FILTER	0.5	0.326	0.3449	NA	NA	NA	0.0	0.0	0.0	1.0	0.0	1.9
E052	chr4	88906378	88906462	TRUE	OK	38.3	0.013	0.4187	0.8298	-0.215	-0.108	30.6	22.9	30.2	46.7	63.7	35.8
E053	chr4	88936282	88936313	FALSE	LOW_COUNTS_INDEP_FILTER	1.1	0.122	0.3175	NA	NA	NA	0.0	0.0	1.0	2.0	1.0	2.9
E054	chr4	88936313	88936422	FALSE	LOW_COUNTS_INDEP_FILTER	5.4	0.0304	0.6815	NA	NA	NA	4.9	2.1	5.0	6.0	4.9	9.7
E055	chr4	88936422	88938087	TRUE	OK	60.8	0.009	3.246e-06	0.002244	-1.016	-0.508	64.1	57.3	59.4	44.7	60.7	78.3
E056	chr4	88938087	88938241	TRUE	OK	63.5	0.00415	0.0002261	0.05379	-0.684	-0.342	55.2	52.1	60.4	58.6	84.2	70.6
E057	chr4	88989623	88990972	TRUE	OK	98.4	0.01	1.352e-09	2.781e-06	-1.252	-0.626	102.5	108.4	102.7	107.2	83.2	86.0
E058	chr4	88990972	88991150	TRUE	OK	78.4	0.00397	2.085e-05	0.009863	-0.740	-0.370	81.8	59.4	69.5	88.4	92.1	79.3
E059	chr4	89008950	89009078	FALSE	LOW_COUNTS_INDEP_FILTER	6.5	0.0684	0.1475	NA	NA	NA	10.8	6.3	2.0	8.9	4.9	5.8
E060	chr4	89020459	89020529	TRUE	OK	94.6	0.0101	2.179e-05	0.01023	-0.888	-0.444	92.7	82.4	92.7	117.1	87.2	95.7
E061	chr4	89020529	89020669	TRUE	OK	138.2	0.00902	5.578e-05	0.02052	-0.774	-0.387	144.9	105.3	122.9	170.8	140.0	145.0
E062	chr4	89029459	89029649	TRUE	OK	168.3	0.00606	2.505e-06	0.001812	-0.765	-0.382	167.6	135.6	148.1	198.6	169.4	190.5
E063	chr4	89029649	89029900	FALSE	LOW_COUNTS_INDEP_FILTER	0.5	0.256	1	NA	NA	NA	1.0	0.0	0.0	1.0	1.0	0.0
E064	chr4	89056937	89056988	TRUE	OK	100.7	0.0145	0.0002557	0.05842	-0.872	-0.436	119.3	76.1	87.6	109.2	88.1	123.8
E065	chr4	89056988	89057117	TRUE	OK	91.3	0.0118	0.003796	0.2606	-0.667	-0.334	106.5	60.5	71.5	101.3	96.9	111.2
E066	chr4	89057117	89057150	TRUE	OK	52.5	0.013	0.0028	0.2265	-0.782	-0.391	67.0	32.3	44.3	53.6	60.7	57.0
E067	chr4	89057150	89057160	TRUE	OK	15.4	0.0179	0.02676	0.536	-0.844	-0.422	13.8	10.4	19.1	20.8	14.7	13.5
E068	chr4	89057160	89057162	FALSE	LOW_COUNTS_INDEP_FILTER	4.8	0.0847	0.6311	NA	NA	NA	3.0	2.1	6.0	8.9	6.9	1.9
E069	chr4	89057162	89057185	FALSE	LOW_COUNTS_INDEP_FILTER	4.8	0.0847	0.6311	NA	NA	NA	3.0	2.1	6.0	8.9	6.9	1.9
E070	chr4	89057185	89057345	FALSE	LOW_COUNTS_INDEP_FILTER	0.3	0.395	0.6351	NA	NA	NA	0.0	0.0	1.0	0.0	0.0	1.0
E071	chr4	89111041	89111398	FALSE	LOW_COUNTS_INDEP_FILTER	3.6	0.0431	0.02727	NA	NA	NA	6.9	2.1	4.0	3.0	2.0	3.9
J072	chr4	88728659	88731326	TRUE	OK	102.3	0.00222	0.005018	0.2968	0.431	0.215	58.2	46.9	61.4	127.1	161.6	158.6
J073	chr4	88731428	88732001	TRUE	OK	75.8	0.00381	0.002474	0.214	0.565	0.283	32.5	38.6	44.3	96.3	116.5	126.7
J074	chr4	88732198	88736360	FALSE	ALL_ZERO	0.0	NA	NA	NA	NA	NA	0.0	0.0	0.0	0.0	0.0	0.0
J075	chr4	88732198	88737471	TRUE	OK	57.4	0.00297	0.08842	0.6871	0.328	0.164	35.5	24.0	38.3	78.4	85.2	83.1
J076	chr4	88732198	88739029	TRUE	OK	20.1	0.0143	0.6035	0.889	0.199	0.100	10.8	13.6	12.1	16.9	35.3	31.9
J077	chr4	88737555	88739029	TRUE	OK	63.1	0.0115	0.0223	0.5083	0.544	0.272	44.4	20.9	31.2	99.3	88.1	94.7
J078	chr4	88739125	88746931	TRUE	OK	95.9	0.00259	0.001629	0.1719	0.505	0.252	56.2	45.9	48.3	137.0	137.1	150.8
J079	chr4	88747015	88747630	TRUE	OK	114.3	0.00212	0.1918	0.7544	0.186	0.093	75.9	61.5	71.5	146.9	157.7	172.1
J080	chr4	88747851	88748951	TRUE	OK	104.7	0.00465	0.004865	0.2922	0.481	0.240	68.0	35.5	62.4	137.0	165.5	159.5
J081	chr4	88749033	88749770	TRUE	OK	95.5	0.0116	0.1607	0.7393	0.292	0.146	72.0	33.4	60.4	122.1	142.0	143.1
J082	chr4	88749909	88750423	TRUE	OK	68.7	0.0213	0.3052	0.7931	0.267	0.133	53.2	22.9	44.3	94.3	85.2	112.2
J083	chr4	88750608	88758753	FALSE	LOW_COUNTS_INDEP_FILTER	0.2	0.556	1	NA	NA	NA	0.0	0.0	0.0	1.0	0.0	0.0
J084	chr4	88750637	88758753	TRUE	OK	86.9	0.00969	0.07577	0.6719	0.390	0.195	58.2	35.5	50.4	94.3	137.1	146.0
J085	chr4	88758901	88767552	TRUE	OK	88.8	0.00611	0.0004655	0.08487	0.673	0.336	56.2	27.1	44.3	125.1	135.1	145.0
J086	chr4	88759164	88767552	FALSE	ALL_ZERO	0.0	NA	NA	NA	NA	NA	0.0	0.0	0.0	0.0	0.0	0.0
J087	chr4	88767595	88767982	TRUE	OK	76.7	0.00816	0.02581	0.5301	0.474	0.237	51.3	30.2	40.3	98.3	106.7	133.4
J088	chr4	88767595	88781164	FALSE	LOW_COUNTS_INDEP_FILTER	0.8	0.115	0.7452	NA	NA	NA	1.0	0.0	1.0	1.0	0.0	1.9
J089	chr4	88768059	88781164	TRUE	OK	67.2	0.0062	0.4576	0.8421	0.144	0.072	52.3	33.4	39.3	95.3	84.2	98.6
J090	chr4	88768059	88906378	FALSE	ALL_ZERO	0.0	NA	NA	NA	NA	NA	0.0	0.0	0.0	0.0	0.0	0.0
J091	chr4	88781351	88787752	TRUE	OK	74.7	0.00256	0.0006058	0.09948	0.606	0.303	38.5	32.3	40.3	112.2	114.6	110.2
J092	chr4	88787932	88790585	TRUE	OK	69.7	0.00414	0.01845	0.4791	0.452	0.226	46.3	27.1	38.3	84.4	120.5	101.5
J093	chr4	88787932	88822975	FALSE	LOW_COUNTS_INDEP_FILTER	1.8	0.0895	0.09739	NA	NA	NA	1.0	0.0	0.0	4.0	1.0	4.8
J094	chr4	88790627	88805010	TRUE	OK	60.6	0.00846	0.4	0.824	0.197	0.099	42.4	28.2	39.3	67.5	108.7	77.3
J095	chr4	88790627	88822975	TRUE	OK	9.7	0.0139	0.002367	0.2096	1.620	0.810	2.0	3.1	3.0	11.9	22.5	15.5
J096	chr4	88805052	88822975	TRUE	OK	33.4	0.0171	0.000766	0.1133	1.132	0.566	17.7	7.3	12.1	37.7	69.5	56.1
J097	chr4	88805052	88851019	TRUE	OK	20.7	0.0074	0.08648	0.6854	-0.524	-0.262	19.7	12.5	19.1	27.8	25.5	19.3
J098	chr4	88851183	88906378	TRUE	OK	18.5	0.0395	0.5826	0.8821	-0.208	-0.104	14.8	11.5	14.1	28.8	30.4	11.6
J099	chr4	88856026	88905685	FALSE	ALL_ZERO	0.0	NA	NA	NA	NA	NA	0.0	0.0	0.0	0.0	0.0	0.0
J100	chr4	88856026	88906378	FALSE	LOW_COUNTS_INDEP_FILTER	3.1	0.0341	0.7072	NA	NA	NA	1.0	2.1	4.0	3.0	5.9	2.9
J101	chr4	88905718	88906378	FALSE	LOW_COUNTS_INDEP_FILTER	0.3	0.626	0.6733	NA	NA	NA	0.0	0.0	0.0	0.0	0.0	1.9
J102	chr4	88906462	88936313	FALSE	ALL_ZERO	0.0	NA	NA	NA	NA	NA	0.0	0.0	0.0	0.0	0.0	0.0
J103	chr4	88906462	88938087	TRUE	OK	24.4	0.0067	0.4409	0.8365	-0.217	-0.109	17.7	14.6	21.2	26.8	40.2	26.1
J104	chr4	88938241	88990972	TRUE	OK	20.3	0.0115	0.3081	0.7938	-0.318	-0.159	14.8	16.7	15.1	14.9	31.3	29.0
J105	chr4	88938241	89020459	TRUE	OK	16.7	0.00694	0.002478	0.214	-0.979	-0.490	17.7	13.6	18.1	16.9	14.7	19.3
J106	chr4	88991150	89008950	FALSE	LOW_COUNTS_INDEP_FILTER	3.6	0.143	0.6956	NA	NA	NA	6.9	0.0	2.0	6.0	3.9	2.9
J107	chr4	88991150	89020459	TRUE	OK	39.5	0.0172	0.0007611	0.1128	-0.976	-0.488	42.4	33.4	40.3	52.6	32.3	35.8
J108	chr4	89009078	89020459	FALSE	LOW_COUNTS_INDEP_FILTER	3.0	0.34	0.534	NA	NA	NA	3.9	4.2	0.0	4.0	0.0	5.8
J109	chr4	89020669	89029459	TRUE	OK	87.8	0.00535	0.0006279	0.1017	-0.615	-0.308	80.9	67.8	76.5	110.2	90.1	101.5
J110	chr4	89029649	89056937	TRUE	OK	80.9	0.0114	0.0001779	0.04602	-0.845	-0.422	93.7	64.6	67.5	85.4	72.5	101.5
J111	chr4	89029649	89111041	FALSE	LOW_COUNTS_INDEP_FILTER	0.5	0.44	0.3532	NA	NA	NA	0.0	2.1	0.0	0.0	0.0	1.0
J112	chr4	89056988	89057117	FALSE	LOW_COUNTS_INDEP_FILTER	3.5	0.0333	0.03769	NA	NA	NA	5.9	2.1	4.0	4.0	1.0	3.9

Color Codes
NO TEST	p > 0.05	p < 0.05	p < 0.005	p < 5e-04	p < 5e-05

Gene ENSG00000138640.15
expr	exprTX	normCt	normCtTX	rExpr	rExprTX	rawCt	rawCtTX
PLOT	PLOT	PLOT	PLOT	PLOT	PLOT	PLOT	PLOT
TABLE	TABLE	TABLE	TABLE	TABLE	TABLE	TABLE	TABLE