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binID | chr | start | end | testable | status | baseMean | dispersion | pvalue | padjust | log2FC (yes/no) | log2FCvst (yes/no) | Normalized Coverage Counts | |||||
MCF10A-KI-DMSO-7 | MCF10A-KI-DMSO-8 | MCF10A-KI-DMSO-9 | MCF10A-KI-BYL719-10 | MCF10A-KI-BYL719-11 | MCF10A-KI-BYL719-12 | ||||||||||||
E001 | chr6 | 110982014 | 110982037 | FALSE | LOW_COUNTS_INDEP_FILTER | 0.8 | 0.263 | 0.01563 | NA | NA | NA | 0.0 | 0.0 | 0.0 | 0.0 | 2.9 | 1.9 |
E002 | chr6 | 110982037 | 110982049 | TRUE | OK | 12.3 | 0.0153 | 0.001537 | 0.1669 | 1.251 | 0.626 | 7.9 | 14.6 | 8.1 | 10.9 | 14.7 | 17.4 |
E003 | chr6 | 110982049 | 110982129 | TRUE | OK | 341.6 | 0.00394 | 6.106e-06 | 0.003689 | 0.576 | 0.288 | 367.8 | 384.8 | 358.6 | 323.6 | 309.5 | 305.5 |
E004 | chr6 | 110982315 | 110982503 | FALSE | LOW_COUNTS_INDEP_FILTER | 0.2 | 0.853 | 0.821 | NA | NA | NA | 1.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 |
E005 | chr6 | 110985005 | 110985138 | TRUE | OK | 661.0 | 0.00586 | 3.237e-05 | 0.01349 | 0.589 | 0.294 | 732.6 | 752.8 | 708.1 | 617.5 | 579.7 | 575.3 |
E006 | chr6 | 110988987 | 110989027 | FALSE | LOW_COUNTS_INDEP_FILTER | 9.3 | 0.0161 | 0.7114 | NA | NA | NA | 11.8 | 11.5 | 10.1 | 9.9 | 5.9 | 6.8 |
E007 | chr6 | 110989027 | 110989065 | TRUE | OK | 587.8 | 0.00553 | 0.001323 | 0.1539 | 0.449 | 0.224 | 658.7 | 712.2 | 633.5 | 536.1 | 458.3 | 527.9 |
E008 | chr6 | 110991746 | 110991786 | TRUE | OK | 649.6 | 0.00591 | 0.02347 | 0.5155 | 0.325 | 0.163 | 747.4 | 829.0 | 706.1 | 557.0 | 485.7 | 572.4 |
E009 | chr6 | 110997182 | 110997264 | TRUE | OK | 619.1 | 0.00531 | 0.8926 | 0.9742 | 0.019 | 0.009 | 754.3 | 889.4 | 671.8 | 461.6 | 439.7 | 497.9 |
E010 | chr6 | 110999710 | 110999787 | TRUE | OK | 666.4 | 0.00453 | 0.226 | 0.7674 | -0.154 | -0.077 | 794.7 | 1029.2 | 751.4 | 491.4 | 425.0 | 506.6 |
E011 | chr6 | 111008037 | 111008137 | TRUE | OK | 786.4 | 0.00327 | 0.4586 | 0.8424 | -0.087 | -0.044 | 880.5 | 1214.8 | 903.5 | 589.7 | 530.8 | 599.4 |
E012 | chr6 | 111015753 | 111015856 | TRUE | OK | 869.6 | 0.00348 | 0.13 | 0.7233 | -0.181 | -0.090 | 976.1 | 1394.1 | 995.1 | 630.4 | 599.3 | 622.6 |
E013 | chr6 | 111024182 | 111024327 | TRUE | OK | 891.6 | 0.00346 | 0.1752 | 0.7465 | -0.159 | -0.079 | 1000.8 | 1405.6 | 1030.4 | 656.2 | 664.9 | 591.7 |
E014 | chr6 | 111025402 | 111028263 | TRUE | OK | 1022.1 | 0.00149 | 0.0007606 | 0.1128 | -0.269 | -0.134 | 1216.7 | 1540.1 | 1239.9 | 787.3 | 687.5 | 661.3 |
J015 | chr6 | 110982129 | 110985005 | TRUE | OK | 337.3 | 0.00362 | 3.377e-06 | 0.002305 | 0.575 | 0.288 | 365.8 | 379.5 | 351.5 | 319.7 | 304.6 | 302.6 |
J016 | chr6 | 110982503 | 110985005 | FALSE | ALL_ZERO | 0.0 | NA | NA | NA | NA | NA | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 |
J017 | chr6 | 110985138 | 110988987 | FALSE | LOW_COUNTS_INDEP_FILTER | 1.2 | 0.177 | 0.9057 | NA | NA | NA | 1.0 | 1.0 | 2.0 | 3.0 | 0.0 | 0.0 |
J018 | chr6 | 110985138 | 110989027 | TRUE | OK | 517.5 | 0.00554 | 0.0001464 | 0.04032 | 0.534 | 0.267 | 570.9 | 602.7 | 548.9 | 490.4 | 415.2 | 476.7 |
J019 | chr6 | 110985138 | 110991746 | FALSE | LOW_COUNTS_INDEP_FILTER | 7.3 | 0.0189 | 0.162 | NA | NA | NA | 5.9 | 8.3 | 8.1 | 4.0 | 10.8 | 6.8 |
J020 | chr6 | 110989065 | 110991746 | TRUE | OK | 531.2 | 0.00723 | 0.004571 | 0.284 | 0.448 | 0.224 | 602.5 | 630.8 | 573.1 | 480.5 | 409.3 | 491.2 |
J021 | chr6 | 110991786 | 110997182 | TRUE | OK | 431.4 | 0.00393 | 0.3919 | 0.8211 | 0.109 | 0.055 | 515.7 | 585.0 | 480.4 | 325.6 | 325.1 | 356.8 |
J022 | chr6 | 110997264 | 110999710 | TRUE | OK | 417.9 | 0.00771 | 0.1376 | 0.7282 | -0.244 | -0.122 | 517.7 | 675.7 | 457.3 | 286.9 | 248.7 | 321.0 |
J023 | chr6 | 110999787 | 111008037 | TRUE | OK | 515.3 | 0.0047 | 0.3683 | 0.8129 | -0.120 | -0.060 | 608.4 | 801.9 | 572.1 | 386.2 | 324.1 | 399.3 |
J024 | chr6 | 111008137 | 111015753 | TRUE | OK | 592.1 | 0.0019 | 0.5151 | 0.8608 | -0.063 | -0.032 | 662.6 | 893.6 | 695.0 | 428.9 | 420.1 | 452.5 |
J025 | chr6 | 111015856 | 111024182 | TRUE | OK | 520.0 | 0.00368 | 0.1159 | 0.7129 | -0.201 | -0.100 | 567.9 | 865.5 | 599.3 | 367.3 | 364.3 | 355.8 |
J026 | chr6 | 111024327 | 111025402 | TRUE | OK | 497.8 | 0.0016 | 0.254 | 0.777 | -0.103 | -0.051 | 577.8 | 752.8 | 578.1 | 381.2 | 377.0 | 320.0 |
Color Codes | |||||
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NO TEST | p > 0.05 | p < 0.05 | p < 0.005 | p < 5e-04 | p < 5e-05 |
Gene ENSG00000197498.13 | |||||||
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expr | exprTX | normCt | normCtTX | rExpr | rExprTX | rawCt | rawCtTX |
PLOT | PLOT | PLOT | PLOT | PLOT | PLOT | PLOT | PLOT |
TABLE | TABLE | TABLE | TABLE | TABLE | TABLE | TABLE | TABLE |