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binID | chr | start | end | testable | status | baseMean | dispersion | pvalue | padjust | log2FC (yes/no) | log2FCvst (yes/no) | Normalized Coverage Counts | |||||
MCF10A-KI-DMSO-7 | MCF10A-KI-DMSO-8 | MCF10A-KI-DMSO-9 | MCF10A-KI-BYL719-10 | MCF10A-KI-BYL719-11 | MCF10A-KI-BYL719-12 | ||||||||||||
E001 | chr12 | 6491885 | 6492102 | TRUE | OK | 35.9 | 0.0378 | 0.2819 | 0.7855 | -0.429 | -0.214 | 56.2 | 50.1 | 24.2 | 32.8 | 20.6 | 31.9 |
E002 | chr12 | 6492102 | 6492146 | TRUE | OK | 67.2 | 0.00833 | 0.4426 | 0.8372 | -0.172 | -0.086 | 74.0 | 103.2 | 49.4 | 64.5 | 58.8 | 53.2 |
E003 | chr12 | 6492146 | 6492150 | TRUE | OK | 168.5 | 0.0103 | 0.6305 | 0.8978 | -0.121 | -0.060 | 168.6 | 266.9 | 123.9 | 168.8 | 136.1 | 147.0 |
E004 | chr12 | 6492150 | 6492151 | TRUE | OK | 173.4 | 0.0101 | 0.5379 | 0.8682 | -0.145 | -0.073 | 172.6 | 277.4 | 129.9 | 172.7 | 137.1 | 150.8 |
E005 | chr12 | 6492151 | 6492280 | TRUE | OK | 1990.9 | 0.00368 | 0.09784 | 0.6966 | -0.193 | -0.096 | 1853.7 | 3004.1 | 1801.9 | 1890.3 | 1724.5 | 1670.7 |
E006 | chr12 | 6492280 | 6492467 | TRUE | OK | 5051.9 | 0.00353 | 0.1282 | 0.7223 | -0.173 | -0.086 | 4674.7 | 7212.5 | 4595.0 | 4751.5 | 4494.9 | 4582.8 |
E007 | chr12 | 6492861 | 6492972 | TRUE | OK | 5339.0 | 0.00232 | 0.3433 | 0.8049 | -0.073 | -0.037 | 4935.0 | 7188.5 | 5070.4 | 5057.3 | 4743.6 | 5039.2 |
E008 | chr12 | 6492972 | 6493046 | TRUE | OK | 127.6 | 0.0334 | 0.5677 | 0.8774 | -0.111 | -0.056 | 131.1 | 168.9 | 121.9 | 119.1 | 157.7 | 66.7 |
E009 | chr12 | 6493057 | 6493250 | TRUE | OK | 3586.5 | 0.00207 | 0.05335 | 0.6337 | -0.146 | -0.073 | 3400.7 | 4870.5 | 3489.0 | 3365.6 | 3067.1 | 3325.9 |
E010 | chr12 | 6493250 | 6493262 | TRUE | OK | 251.8 | 0.00184 | 0.5627 | 0.8759 | -0.052 | -0.026 | 232.7 | 330.5 | 254.8 | 243.2 | 220.3 | 229.1 |
E011 | chr12 | 6493262 | 6493295 | TRUE | OK | 85.0 | 0.00313 | 0.1038 | 0.7014 | -0.250 | -0.125 | 87.8 | 115.7 | 89.6 | 77.4 | 71.5 | 67.7 |
E012 | chr12 | 6493458 | 6493673 | TRUE | OK | 885.8 | 0.00889 | 0.002748 | 0.2243 | 0.515 | 0.257 | 791.8 | 850.9 | 765.5 | 942.2 | 969.5 | 994.9 |
E013 | chr12 | 6493673 | 6493716 | TRUE | OK | 488.8 | 0.0153 | 0.006381 | 0.3271 | 0.612 | 0.306 | 452.6 | 412.9 | 404.9 | 524.2 | 560.1 | 578.2 |
E014 | chr12 | 6493716 | 6493718 | TRUE | OK | 785.9 | 0.00506 | 3.625e-05 | 0.01477 | 0.544 | 0.272 | 667.5 | 796.6 | 646.6 | 826.0 | 878.4 | 900.1 |
E015 | chr12 | 6493718 | 6493840 | TRUE | OK | 779.4 | 0.00584 | 0.0001538 | 0.0418 | 0.532 | 0.266 | 682.3 | 783.1 | 635.6 | 824.0 | 869.6 | 881.8 |
E016 | chr12 | 6493840 | 6493841 | TRUE | OK | 25.2 | 0.0904 | 0.918 | 0.9808 | -0.001 | -0.000 | 37.5 | 16.7 | 26.2 | 27.8 | 31.3 | 11.6 |
J017 | chr12 | 6492467 | 6492861 | TRUE | OK | 3081.8 | 0.00187 | 0.832 | 0.9583 | -0.015 | -0.008 | 2873.2 | 4186.5 | 2816.2 | 2915.8 | 2711.6 | 2987.5 |
J018 | chr12 | 6492467 | 6493716 | FALSE | ALL_ZERO | 0.0 | NA | NA | NA | NA | NA | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 |
J019 | chr12 | 6492972 | 6493057 | TRUE | OK | 3096.2 | 0.00182 | 0.03977 | 0.5929 | -0.148 | -0.074 | 2939.3 | 4220.9 | 3024.7 | 2907.9 | 2615.7 | 2868.6 |
J020 | chr12 | 6492972 | 6493250 | FALSE | LOW_COUNTS_INDEP_FILTER | 8.0 | 0.0563 | 0.592 | NA | NA | NA | 3.0 | 11.5 | 14.1 | 7.9 | 6.9 | 4.8 |
J021 | chr12 | 6492972 | 6493458 | TRUE | OK | 315.9 | 0.001 | 0.2632 | 0.7801 | 0.100 | 0.050 | 281.0 | 414.0 | 284.0 | 303.8 | 291.8 | 321.0 |
J022 | chr12 | 6492972 | 6493673 | TRUE | OK | 24.7 | 0.0181 | 0.4266 | 0.8319 | 0.278 | 0.139 | 29.6 | 24.0 | 18.1 | 20.8 | 30.4 | 25.1 |
J023 | chr12 | 6492972 | 6493716 | TRUE | OK | 376.5 | 0.0014 | 3.385e-06 | 0.002305 | 0.409 | 0.205 | 286.9 | 461.9 | 303.2 | 381.2 | 408.4 | 417.7 |
Color Codes | |||||
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NO TEST | p > 0.05 | p < 0.05 | p < 0.005 | p < 5e-04 | p < 5e-05 |
Gene ENSG00000111639.8 | |||||||
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expr | exprTX | normCt | normCtTX | rExpr | rExprTX | rawCt | rawCtTX |
PLOT | PLOT | PLOT | PLOT | PLOT | PLOT | PLOT | PLOT |
TABLE | TABLE | TABLE | TABLE | TABLE | TABLE | TABLE | TABLE |